Oncorhynchus kisutch (coho salmon): 109907777
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Entry
109907777 CDS
T09179
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109907777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109907777
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109907777
GBAF(ncBAF) complex
109907777
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
109907777
NCBI-ProteinID:
XP_020361565
Ensembl:
ENSOKIG00005007666
LinkDB
All DBs
Position
LG17:complement(47485445..47504018)
Genome browser
AA seq
471 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNMGSIGAGGMGQSGGRGPLHSQSNLNDTMTPGLPPTSML
QSQMSNGPSHAPMQQQAGQTQSAGPSSTSLSLPASTHGSASGYSHPVPPSSQGSMIQGLG
PGYGSSSSSSTSSRSNLNMQSNTVSMMHQQSATPHYPSTQTGGGQQQYQGQQAAMGMLGQ
SGQGNNMMSQRPMGTYRPTQQGSAPQYMGQDDFYGEQYGHTQSSSEPINQQYYSDGHGEY
SYQQSSYGEQGYERSFDESSQHYYEGGNSQYSQQQAQYQQGSGQQQPFSQQQYPSQQGYS
GQPQVYGPGQGAQSQYSQYQQGQGQQYSSYRSQASSGAQTQRPYAYEQVQLQLPPTPRFE
EDRTVQQNIGVNTETTSNKAPPPGQTGGQVRQGNSSVNNPQQSCVNQSLSK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcattttcatcggcgcgcccaaggagcaaaggggaggtgacacagcaaacg
atacaaaagatgctggatgaaaatcaccatctgatacagtgcataatggattaccagagc
aaaggaaaaacagcagaatgcacacagtatcagcagatccttcacagaaacctagtttat
ctggccacgatagcagattctaatcagaacatgcagtcattgttacctgcacctcctacc
cctaacatggggagtataggtgctggaggaatgggacagagtggaggcagagggccccta
cactcccagagtaacctcaacgacaccatgacccctggcctgccccctacctctatgttg
cagagtcagatgagcaatggccccagccacgctcccatgcagcagcaggcgggtcagaca
cagtcggctgggccctcatccacgtccctcagcctgccagccagcacccacggctcagcc
tccggctacagccaccccgtgcccccctcctcccagggcagcatgatccagggccttggc
ccaggctacggttcttcctcttcctcttctacctcctcccgcagcaacctcaacatgcag
tctaacacagtctccatgatgcaccagcagtcggctacacctcattacccctcaacccag
actggtggcggacagcagcagtaccagggtcagcaggctgctatgggcatgttggggcag
agcggacaaggcaacaacatgatgagccagaggcccatggggacctaccgacccacacag
caaggatcggcaccgcagtacatgggacaagacgatttctacggagagcagtacggacac
actcagagctccagcgagcccataaaccagcagtattactctgatggtcatggggagtac
tcctaccaacaatcatcctacggtgaacagggctatgagaggtcctttgatgagtcctca
cagcactactacgaaggaggcaactctcagtacagtcagcagcaggcccagtaccagcag
gggtcaggccagcagcagcccttcagccaacaacagtacccctcacagcagggctacagc
ggacagccacaggtctatggtccaggtcagggtgcgcagtcccagtactcccagtaccag
cagggtcagggccagcagtacagctcctaccgctcccaggcttcctctggggcacagaca
cagaggccctacgcctacgaacaggtacaactacagctacccccaaccccacgttttgag
gaggaccgtactgtccaacaaaacattggggtcaatacggaaactaccagcaataaggca
ccacctcctgggcaaactggtggacaagttaggcaagggaacagttctgtgaataacccc
caacagtcgtgtgtaaaccagtctctgagtaaatga
DBGET
integrated database retrieval system
