Oncorhynchus kisutch (coho salmon): 109907780
Help
Entry
109907780 CDS
T09179
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109907780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109907780
03036 Chromosome and associated proteins [BR:
oki03036
]
109907780
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109907780
Coactivators
SAGA/TFTC/STAGA complex
109907780
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109907780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
109907780
NCBI-ProteinID:
XP_020361571
Ensembl:
ENSOKIG00005007756
LinkDB
All DBs
Position
LG17:47540265..47554027
Genome browser
AA seq
943 aa
AA seq
DB search
MAAGSDLLDDAFFNTEVDEKVVSDLVGSLESELTGSGRGNSAVRVQAAANHIGNPAVCGK
SNVQDSKMGLSQELAKPGTSVQAGVINSTRSTMDTAAGTTAAAGSGMTAGHSQSKTGAAG
CVVTVVPDHGEGIGKTGSAGVQTLNGSSVVINSHNLVSSASSTVPAVTVVNNGPGSLVEG
NVILPSTSIQTSLMDNAVTSTVVSSQPSVLNSVPTVTLVRPPMHTAGAVTSPSGSNTFLT
SSVNVAHPAFSGAQINKSESPKTSIQKTAQVTGTAVAKSPSTIAISPGGIRAIAPQVLAP
RLPQPQQNAPNIQNIQLPPGMVLVRSESGQLLMIHQQTLAQMQAQSQSPMTPRPATPTNT
PPVQITSVQAPGMPLMARQVTPTTIKQGTPAQTTVLQRPPVLQQNTIVLGGAAATPGQAP
VQPGLAATAAVNQRAGTPGATGTPGTPTTTMETLENVKKCKNFLSTLIKLASSGKQSSET
TASVKDLVKSLLEGKIEAEEFTSRLYRELNSSPQPYLVPFLKRSLPALRQMTPDSTAFIQ
QSQLPQASVQPASSSTALTTVALGGTAAAQRLPLNRTTSPGAKGTMHQSPVISPALTPHS
KPGLMVPQQQGALASTQVTLAQSPMVTFRGQSHSRIIMGHPQVVKQLQTVPVVKQALSPG
AKVTLGRQSMLSVAQKNKLKEASGGTFKDDDDINDVASMAGVNLSEESARILATNSELVG
AVTRSCKDEAFLHTTSLTRRVQEIGRRFGVIDLGPEVINYVSHATQQRLQNLLEKVTEVA
QQKNITFKEDDKYEQVSDVRAQLKFYEQLDQMEKQRKEEQEREILMKAAKSRSRQEDPEQ
LRLKQKAKEMQQQELNQIRQKEANMTALAAIGPRKKRKMESPVNGAGAEGSGSGPSSSGG
ANSGGSRPQRQRITRVNLRDLLFCLENERETSSSHLLYKGFLK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatttgctggatgatgcctttttcaacactgaggtggacgagaaa
gtagttagtgatctagttggatctttggagtctgagctcacgggatcgggtcgcggaaac
tctgcagtcagggtccaggctgccgcaaatcacattggcaaccccgctgtatgtggcaaa
tccaatgtccaggacagcaaaatgggactttcacaagagcttgctaaaccagggactagc
gtccaagcgggtgtcattaatagtacgaggtccaccatggatacagccgccgggacgacg
gcggcggcgggctcaggcatgacagcgggacacagtcagagtaagactggggcagccggt
tgtgtggtaacagtggttcccgatcacggggaagggatcgggaaaaccgggtcggctggt
gtacaaactttaaatggaagtagcgttgtaataaactctcataatttggtgagctcggca
agcagcacagtgcccgcagtcacagttgtcaacaacggaccaggctccctggtcgaagga
aacgtaatcttaccctcaacttccattcaaacctctctaatggacaatgctgtcacttca
actgtagtatcgtctcagccgtctgttctaaacagtgtgcccactgtcacgctcgtgagg
ccgcctatgcacaccgccggagcagtcacctcgccgagcgggagcaatacctttctgaca
tcatctgtcaacgtcgcccaccctgcattttcaggagcacaaatcaacaagtcggagtcg
ccaaaaacgtcaatacaaaagaccgcacaggtgacggggacggctgtagcgaaaagccca
tcgactattgcaatcagtcctggtgggataagggcgatcgctccccaggtattggccccg
agacttccgcagccccaacagaatgccccaaacatccaaaacattcagctccccccaggg
atggtgttggtgcgcagtgagagtgggcagctgttaatgatccaccagcagaccctggcc
cagatgcaggctcagtcccagagccccatgaccccacggccagccacccccaccaacacg
ccccctgtccagatcacctctgttcaggctccagggatgcccctcatggcccgtcaggtg
acccccaccaccatcaagcagggcaccccggcccagactactgtcctccagaggcctcct
gtgctacagcagaacaccattgtgctgggtggggcggctgccaccccaggtcaggcccca
gtgcagcctggcttagcggcaaccgcagcagtcaaccagcgagcagggacccccggagct
accgggacaccaggcactcccactaccactatggagaccctggagaatgtgaagaaatgc
aagaacttcctttccacgctgatcaagctggcatccagcgggaagcagtcgtcagagacc
acggccagcgtcaaggacctggtcaagagcctgttggaaggtaagatcgaagcggaggag
ttcaccagtcggttataccgggagctcaactcctctcctcagccatatcttgtgcctttc
ctcaagaggagtctccctgcactgcgtcagatgaccccagactcgacagccttcatccag
cagagccagcttccccaggccagcgtccagcctgcctcctcctccacagccctgactaca
gtggcgctggggggcacggccgctgcacagagactccctcttaacagaaccaccagcccc
ggggccaaggggaccatgcaccagtcccctgtcatcagcccggccctgacacctcacagc
aagcctggcctgatggtgccccagcagcagggggcgttggcgagtactcaggtaactctg
gcccagtcgcccatggttactttccgaggccagtcccacagtcgcatcatcatgggacat
ccgcaggtggtcaaacagctgcaaacagttcctgtagtgaaacaagctctatcaccaggg
gccaaggtaacactggggcgccagtctatgctctctgttgcacagaagaacaagctgaag
gaggcaagcggaggaaccttcaaagatgatgatgatatcaatgacgtggcctccatggct
ggagtcaacctgtcagaggagagcgcccgtatcctggcaaccaactctgagctggtgggc
gcggtgactcgctcctgtaaggacgaggccttcctccacaccacttcactaacccggaga
gtacaggagatcggtaggaggtttggggtgattgacctggggccagaagttatcaactac
gtttcccatgcaacacagcagcggctgcagaacctgctggagaaagtgacggaggtggcg
cagcagaaaaacatcaccttcaaggaggatgataagtatgaacaggtgagtgacgtgcga
gcccagctgaagttctatgagcagctggatcagatggagaaacagaggaaggaggagcag
gagagggagatcctgatgaaggctgccaagtctcgatcgcggcaagaggacccagagcag
cttcggctcaaacagaaggccaaagagatgcagcagcaggagctgaatcagatcaggcag
aaggaggccaacatgacggccctggcagccatcggccccaggaagaaacggaaaatggag
tcccccgtcaacggcgccggggctgagggttctggctctggtccctcgtcgtcgggtggg
gccaatagcggaggctccagacctcagcgccagcgcatcaccagggtcaacctcagggac
ctgctcttctgtctggagaatgagagagaaaccagtagctcacatctgctctacaaaggc
ttcctcaaataa
DBGET
integrated database retrieval system
