Oncorhynchus kisutch (coho salmon): 109907893
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Entry
109907893 CDS
T09179
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109907893
03019 Messenger RNA biogenesis [BR:
oki03019
]
109907893
03041 Spliceosome [BR:
oki03041
]
109907893
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
109907893
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109907893
mRNA cycle factors
Common to processing body (P body) and stress granule
109907893
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
General mRNP proteins
109907893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
109907893
NCBI-ProteinID:
XP_020361758
Ensembl:
ENSOKIG00005019659
LinkDB
All DBs
Position
LG17:52796277..52802919
Genome browser
AA seq
379 aa
AA seq
DB search
MAGDSPLHSFSFLPVRSATGERKVESPKAAAPTTAGPGYHLAPGNTLESHRRHYQPETMS
SEAETQQPPEPAVDSESPPSPPATASAGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKE
DVFVHQTAIKKNNPKKYLRSVGDGETVEFDVVEGEKGAEAANVTGPAGVPVQGSKYAADR
NRYRRYPRRRGPARDGEYPDNYQSDGEGEGERPPRKSRESAESAPEGEMQTQQRRPPFPG
RRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDENQGGPDQGNKPMRQNYYRGFRPSRG
GGPPRPRPVRDGDGENKENQDGDGENQEPRQRRYRRNFNYRRRRPQTGGKPQDGKEAKTD
GEPSTEKTPAPAAEQGGAE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggctggggatagtccactgcatagtttttcgttcctcccagttcgatcggcaacggga
gagaggaaagttgagagcccgaaggcagcagcccccaccaccgccggcccaggttaccat
ctagcaccgggaaatacactagagagccaccgccggcattaccaaccagaaaccatgagc
agcgaggccgagacacaacaaccgccggagcctgctgtggattcggagagcccacccagc
ccgccagctacagcttccgcgggggataagaaggtcatcgcaactaaggttttgggtaca
gtcaaatggttcaacgtcagaaatggctacgggttcatcaacaggaatgacacaaaagaa
gatgtctttgtccaccagactgccataaagaaaaacaacccaaagaaataccttcgcagt
gttggagatggcgaaactgtggagtttgatgtggttgagggggagaagggagcagaggca
gccaatgtgaccggcccagcgggtgtcccagtccaggggagcaagtatgcagctgaccgg
aaccgctacaggcggtacccccgcaggaggggcccagcccgtgacggcgaatacccggac
aactaccagagtgatggcgagggtgaaggagagcgccccccccgcaagagccgcgagagt
gctgagagtgccccagaaggagagatgcagacccagcagcgcaggccccccttccccggg
agacggcgctaccccccatactttgtacgtagacgctacggccgtcggcccccgtacacc
aacgcacctcgcggagagatgactgagggtggcgaaggtgacgagaaccagggaggtcca
gaccagggcaacaaaccaatgagacagaactactacagaggcttccgaccaagcaggggt
ggcggtccaccccgtcccagaccggtgcgggacggcgatggggaaaacaaggagaaccag
gatggtgatggtgagaaccaggagccccgccagcgccgctaccgccgaaacttcaactat
cgccgcagacgcccacagactggcggcaagccccaggatggcaaggaggccaagactgac
ggcgaaccatctacagagaaaacgcccgctcccgcggccgagcagggcggggctgagtag
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integrated database retrieval system
