KEGG   Oncorhynchus kisutch (coho salmon): 109907903
Entry
109907903         CDS       T09179                                 
Symbol
plod1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X2
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki00310  Lysine degradation
oki01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oki00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    109907903 (plod1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109907903 (plod1)
Enzymes [BR:oki01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     109907903 (plod1)
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109907903 (plod1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 109907903
NCBI-ProteinID: XP_020361782
Ensembl: ENSOKIG00005023099
LinkDB
Position
LG17:complement(53615851..53631776)
AA seq 732 aa
MRAFSLLILAWMSLLVVLPVIRCKEQRELSEGNLLVVTVATKETDGFRRFMRSARHFNYT
IKVLGRGEPWKGGDYMTEPGGGQKVRLLKAGLQEMEEDKVVLFIDSYDVVFASGPKELLK
KFQQTRHKVVFSAETLIWPDRHLEDKHPHFREGKRFLGSGGFIGYVPNLKEMVADWTGED
SDSDQLFFTKIYINPEKRKSINITLDNRCRMFHNLHGSLDEVVLKFEDGQVRARNVLYDT
LPVVIHGNGPTKLQINYLSNYIPTVWTFETGCSVCLEDLRPLSGLKESEYPLVVIGIFIQ
QPTPFVSVFFETLLKLEYPKNRLKLFIYNQEQHHEVAVSSFLKDHGKEYQDVKVIGPEEN
MDRVASRNLGLDMCRQDKDCEYFFSMDIEVVLKNKDTLKILIEQNEPIIAPMITREGRLW
TNFWGALSADGYYARSEDYVDIVQGRRVGVWNVPYLTKVYLVKASLLHEELSNNDLFSSG
TLDLDMAFCHNARNKGVFMYVTNMHTFGRMLSTENYQMSHLHNDLWQIFENPKDWEERYI
HENYTKIMRDKLIETPCPDVYWFPLFSDIGCDHIVQEMENFGQWSGGRNTDTRIQGGYEN
VPTIDIHMTQINYEKEWQKLLLDYIAPITETMYPGYYTKAQFDLAFVVRYKPDEQPFLRP
HHDASTFTINIALNQKVLDYQGGGCRFIRYNCSVEAPRKGWALMHPGRLTHYHEGLRTTA
GTRYIAVSFVDP
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagagctttttccttattaatattggcctggatgtccttgcttgtggttttaccagtg
atacgttgtaaagaacagcgagaactatccgaaggcaaccttttagttgtgactgttgcg
accaaagagacagatggcttcaggcgtttcatgaggtctgcccgacactttaactacact
atcaaggtgcttggcagaggggagccatggaaaggtggggactatatgaccgagccagga
gggggtcagaaagtgcgccttcttaaagctggtttgcaggagatggaggaagacaaggtt
gtcctcttcattgacagctatgatgttgtcttcgcctccggtcccaaagagctgctgaag
aagttccagcagacaagacacaaggtggtcttctctgcagagaccctcatctggcccgac
agacacttggaggacaagcacccccacttccgagagggaaagaggttcttgggctcaggg
ggattcattggctatgttcctaacctcaaagagatggttgctgactggacaggggaggac
agtgacagtgatcaacttttcttcaccaagatttatatcaacccagagaaaagaaaatcc
atcaatataacactggacaacagatgccgaatgtttcataatcttcatggatcccttgat
gaggtggtgttgaagtttgaggacgggcaagtgcgggccagaaatgtgttgtatgataca
ttacctgtcgttattcatggcaacgggcccaccaagctccagatcaactacttaagcaac
tacatccccacagtgtggacgtttgagacgggatgcagtgtgtgtcttgaggacctgcgg
ccactctcaggactcaaggagagcgaatacccactggtggttattggaatcttcatccag
cagcccaccccctttgtcagtgtgttctttgagaccttgctcaaactggaatacccaaag
aaccgactcaaactcttcatctacaaccaggagcagcaccacgaggtagcggtcagctct
ttcctgaaggaccatgggaaagagtaccaggatgttaaggtcatcgggcctgaggagaac
atggacagggtggcttcccgcaacctcggccttgatatgtgccgacaggacaaggactgt
gagtatttcttcagcatggatatcgaagtggttctgaagaacaaggacaccctaaagatt
ctcatcgagcaaaatgagcctataattgcacccatgataacccgagaaggccgcctgtgg
accaacttctggggagcactcagtgctgatggttactacgctaggtcggaggactatgtg
gacattgtgcaaggacgcagagttggtgtgtggaatgtcccctacctgaccaaggtgtac
ctggtgaaggccagcctccttcacgaggagctctccaacaacgacctcttcagctcgggc
actctggacctcgacatggccttctgtcacaacgccagaaacaaaggagtcttcatgtat
gttacgaatatgcacacctttggacggatgctgtcgacagaaaactaccagatgagccat
ctccacaacgatttgtggcagatctttgaaaaccctaaggattgggaggagcgttacatc
catgagaactacacaaagataatgagagacaaactgattgaaacaccttgccctgatgta
tactggttcccgctattctctgatattggatgtgaccacattgttcaagaaatggaaaac
tttggacagtggtcaggtggccgaaatacggacacaaggatccagggtggctatgagaat
gtccccaccattgatatccacatgactcaaatcaattatgagaaagagtggcagaagctt
ctgttggattacatagccccaatcacagagacaatgtatcctggatactacaccaaggct
cagtttgacttggcgtttgtagttagatataagccagacgagcagccctttttaaggcca
caccatgacgcgtccacatttactataaatattgcactcaatcaaaaagtgcttgattac
cagggtgggggatgcaggttcatacggtataactgctccgtcgaggcaccccgcaaaggc
tgggccctcatgcaccctggacggctcacccactatcacgagggcctgcgaaccactgca
ggcactcgatacatcgcagtgtcatttgtggacccctga

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