Oncorhynchus kisutch (coho salmon): 109907953
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Entry
109907953 CDS
T09179
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00310
Lysine degradation
oki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109907953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109907953
03036 Chromosome and associated proteins [BR:
oki03036
]
109907953
Enzymes [BR:
oki01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
109907953
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109907953
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109907953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_2
zf-C2H2_jaz
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
109907953
NCBI-ProteinID:
XP_020361856
Ensembl:
ENSOKIG00005026055
UniProt:
A0A8C7HS50
LinkDB
All DBs
Position
LG17:complement(56270222..56288202)
Genome browser
AA seq
1478 aa
AA seq
DB search
MEDSHTLYISELGDDDNLEEEMEDKELEETHCSLYLMSMEMDELADSNTSCQKPEAKGSD
LKQDLGSVSHSSTPELPEDPDHDPDVELQDSFPCQFCERNFTSKQGLERHIHIHTLANHH
THIFMCKYCSKSFGSKIGRRRHERRHENAKARPGSLIKPVEPPSSALQRNGPECVSSPSS
SSASVLADREQASTSDEHGELQGGHTCKYCKKVFSTHTNMRRHQRRIHERHLRLKGKEAP
LLQEAKHPKLPPIKSQQDTNNTSQVAVLEIESDQEEQYMLDISGNISENLSFYIDGKIVS
TSTVSGCEVVEVNSGSATLVGLNAVIINPAQISQALKVETATHTGKGIPGQPLTKRRTAT
PPLLPQIKTELESEVLSSSSSSIVSSLIESLIPQNTESTILQRERTVYLSPKLKQLLQMQ
DGLKPSFALITEGQKLCSPLSLTVLPAGLGRFKRRTGSPPNSPQQSPMSNVESTTTDVGV
SIAVNAPTSESQCSSPACSLSSNDESEISNSPPVNDAMTTRVLPEGWSPMSGGCSCNQQP
LDLSNAVKKSEDEALREAVLDLSVHRKSADSEAKRILVPQPLNKKRKPNTSMLEKVLMNE
YANLEVAAEQELSILENHDAPLVTDFAIVTASDMSPATEGEVFGLTFPSAALSPSPSSLA
SVPRQSISPCTIALASPSPHPILPTAPSLITVLAPPTSSSSNSTNQPILQVLASKISPNP
LIICTEDSLNSAECEWRAALPDWATSNSASQLAISKPLDPTLNLQGHVFLTDHTLNQIAL
NTTTVESNIGFEVPTCSPALTLNDSLINSFDITSNTVLIECTVALETPENLVPTTIDFQE
NNFESTAPAQIVINQQQPLSLPYETVDPSILVSSFEQSVTLSTLSAVISECPTRQESISS
PVPAIIKTESNQKVVSEDISICPSKTPPPSEGTSQVEESSNETLSKLQETFTKEFICNVC
DKLFHSMKELGHHVSEHSDEWPYKCEFCVLLFGKPTALLDHRSTLHGVGKSYVCCACTKE
FAYLCNLKHHQKELHPGRECKYTEEENGKLRPQNYNNATKGSTEALSYCAMAESNKPVIK
DEGELDDATEELFTTIKIMASEGGKPKGLDVCLGINQHYPSFKPPPFPYHNRTPVGSVAS
ATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPNKNPIPLRHF
AKAQNGVLSSTNSTNGQNALHTASQTNRPKLNQEPPAKLKLNALNKRKKQLVQRAISQRS
KPTSLTKKTSSLGDEEQEIYVCPHCIREFTYRRSRTKHMAVCPRKPAAKEAKKRKDGSIS
YTKENNGHLRREVLHLEEKSDHEQKSRAHSSSPTKRTAILPAHKVLSNKKSKAIIAMASV
QTPQEAPKLTALSLVHPFNSPQRQGSRMQHGVKEIRSNITMVKSHQQPPQVDEHPCSQSG
RVRGPVTRSLQQIVVTDSAKEEQLTSQEPPGDLQDPSI
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctcacactttatacatctcagagttgggagatgatgacaatttagaggag
gagatggaggataaggagcttgaggaaactcactgcagtctttatttaatgtccatggaa
atggatgagctggcagattcaaacacaagttgccaaaaaccggaggccaaaggctctgac
ctgaagcaggatttaggatcggtctcccattcatcaacccctgagctcccagaggatcct
gaccatgaccctgatgtagagctccaggactcatttccctgccaattctgtgaaagaaat
tttaccagcaagcaaggcttagaacgtcacattcacatccacaccttagctaaccaccac
acacacatatttatgtgtaagtactgcagcaagtcctttggctcaaaaattggccggcga
cggcatgagaggagacatgaaaatgcaaaggcaaggcctggatctttaataaagcctgtg
gagcctccaagttctgccctacagcgcaacggtccagaatgtgtgtcttctcccagtagc
tccagtgcctctgttttggcagacagagaacaggcgtctacgtcagatgaacatggagaa
ttacagggtggtcacacttgcaagtattgcaaaaaggtttttagcacgcatacaaacatg
cgacgacatcagcgcaggatccacgagcgccatctccggctcaaaggtaaggaagcccca
ctgttgcaggaagcaaaacatccaaagctaccccctattaaatctcaacaggataccaac
aacacaagccaagtagcagttcttgagatcgaaagtgaccaagaggagcaatatatgctg
gatatctctggtaacatctctgagaacctcagcttttatatagatgggaagattgtatca
acaagcactgtcagcggatgtgaggtagttgaagtgaactctggatctgctactttagtc
ggactaaatgctgtgattattaatcctgcccagatcagtcaggctcttaaagtagagact
gctactcacacaggaaaagggatacctggtcaacccttgacaaaaaggagaactgccaca
ccacctcttctaccccaaatcaaaacggaactagaatcggaagttttgtcctcttcttca
tcatcaattgtgtcatctttgatagaaagtctcattcctcagaacacagagtctactatc
cttcagagagagagaacagtttatctgtcacctaagctgaaacagctcttacagatgcaa
gatggcctcaaacccagctttgccctgatcacagaaggccagaagctgtgttcaccactt
tccctgactgtcctcccagcaggattggggaggtttaaaagaaggaccgggtctccccca
aactcaccacaacaaagccctatgtcgaatgttgaaagcacaacaaccgatgtgggtgtt
tctattgctgtcaatgccccaacgtcagagagccaatgcagttcacccgcatgcagttta
tccagcaatgatgagagtgagatctccaacagtccaccagtaaacgatgcaatgacaact
cgtgtcttgccagagggatggtccccaatgagtgggggttgttcctgcaaccagcaacct
ttggacctctcaaatgctgtcaagaaaagtgaagacgaagccctgcgggaagctgtgttg
gacttgagtgtgcacagaaagagtgcagattcggaagcaaagagaattttggttccacag
cccttaaataaaaagaggaagccaaacaccagcatgttggagaaggtgctgatgaatgag
tacgcaaacctagaggttgctgcagagcaagaattaagtatattagaaaatcatgatgca
ccgttagttacagactttgccatagttactgcttcggatatgtcacctgctactgaaggc
gaggtgttcggattaacttttccttctgcagcacttagtccatccccttcctctctagct
tcagtccccaggcaatcaatctcaccatgcaccatagcacttgcttccccatctccacat
ccaatcttacccactgctccgtcgctaattactgttttagcaccaccaacatcttcctct
agcaattccacaaatcaacctatccttcaagtattggcctctaagatatctcctaatcct
ttaataatctgcacagaagattcattgaattcagctgagtgtgagtggagagctgctttg
ccagattgggctacctctaattctgcaagccaacttgccatctctaaaccccttgaccca
actctcaatctacaagggcatgtgtttctcacagatcacactttaaatcaaatagctctg
aacactaccacagttgaatccaacattggatttgaagtgccaacatgctctccagcttta
actctaaacgattcccttatcaactcctttgacattactagtaatactgttttaattgaa
tgcacagttgctcttgaaaccccagagaaccttgtccctaccacaattgatttccaagag
aataattttgaatccacagcacctgcgcaaattgtcataaatcagcagcagcctctgtcc
ttgccttatgaaaccgttgacccttctattttagtatcttcttttgagcaatcggttacc
ctttcaacgctgtctgcagtcatatctgaatgtccaactcgtcaagaatccatttcctcc
cctgttcctgccattattaaaacggaatcaaaccaaaaggtagtatcggaggacatatct
atctgcccctctaaaacgccacctccctctgagggcacaagtcaagtggaagaatcctca
aatgagaccctctccaagctacaagagactttcactaaggaattcatatgcaatgtatgt
gataagctttttcattcaatgaaggaactgggtcatcatgtaagtgagcattctgatgaa
tggccatacaaatgtgagttctgtgtgctactctttggaaagcccacggcattgcttgat
cacaggtcaaccctccatggcgtcggcaagagctatgtttgctgcgcatgtacaaaggaa
tttgcttatctttgcaacctgaaacatcatcaaaaggagttgcaccctggccgggaatgc
aaatacacagaggaagaaaatggcaagttacgaccccagaactataacaatgcaacaaaa
ggtagcacagaggctttgtcctactgtgccatggcggagtccaataaacctgtcataaaa
gatgagggagaattagatgacgctactgaggaactctttaccacaataaagataatggct
tctgagggaggcaaacccaaaggcctggatgtttgccttggcatcaaccaacactatccc
agttttaagccgcctccgtttccatatcacaaccggacacctgttggctctgtagcctca
gctaccaacttcaccacccacaacatcccacaaaccttcagcactgctatccgatgcact
aaatgtggcaaaagctttgataacatgccagagctgcacaaacacattcttgcctgtgca
aatgccagtgacaaaagacgctacacacccaataagaaccccattcctcttcgtcacttt
gcaaaagcccaaaatggagtactgtcctctactaattccacaaatggccaaaatgctcta
cacacggcaagtcaaacaaatcgtcccaaactcaatcaggagccacctgccaagttgaag
cttaatgcactcaacaaaaggaaaaaacagctggtacagagggccatttcacagaggagt
aagcccacctctttgacaaagaaaacctcttctctaggcgatgaggagcaagagatctat
gtctgtccgcattgcattagagaattcacataccgccgcagccggaccaagcacatggcc
gtctgccccaggaaacctgctgccaaagaggccaagaaaagaaaagatggcagtatctct
tacactaaggaaaataacggccaccttcgcagagaagtccttcatttggaagagaaatct
gaccatgaacagaaaagcagagcccatagttcaagtccaacaaagaggacagccatatta
ccagctcataaagtcctgtcaaacaaaaaaagcaaagccatcattgcaatggcaagtgtc
caaacaccgcaggaggcacccaaactgactgcactgtctcttgttcaccctttcaactcc
ccacaacgtcaaggcagtaggatgcagcatggtgtgaaggaaattcgttccaacattaca
atggtgaaatcccaccaacaaccaccacaggtggatgagcacccctgcagtcagagtgga
agggtgaggggaccagtgacccgcagtctacagcagattgtcgtcacagattcagcaaag
gaagaacagctgaccagtcaggagccaccaggggatctgcaggatccttcaatttga
DBGET
integrated database retrieval system
