Oncorhynchus kisutch (coho salmon): 109908035
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Entry
109908035 CDS
T09179
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109908035 (ube4b)
04120 Ubiquitin mediated proteolysis
109908035 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109908035 (ube4b)
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109908035 (ube4b)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
U-box type E3
109908035 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
109908035
NCBI-ProteinID:
XP_031650091
Ensembl:
ENSOKIG00005013102
LinkDB
All DBs
Position
LG17:complement(61163025..61209836)
Genome browser
AA seq
1379 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPWPLPGTSGATPQPLPPAA
SHSLGLHVQSVTPATSPIGASGVTYCSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSSMSQVDVDSGIENMEVEDSDRREKRDLAEKESAENSDVSEEQALQLICKILRV
SWKEQDRDVIFLPLLAAEFHQSSLKDVFSDFKDLIGQILMEVLLMSTQLHVHNPFASLTA
TSEPIAAAKSLDHHLTLIQPSSQGSSPMAPCAGSFGASSLSSLYGCSPHSLALNAARMIS
PPLPTPTSPSQHPMVAPSPPSMAYPPRLSLNLPSAPLPISQRYRPYSVTSPLGISTPPSP
RLASLPGLSRGPITEGLPVPPIILAQAPAPPLPTSPQSVPLPSTSPHPPTSMPLPLVPPS
PRSAARGAALATRIPSSPLSLLFFALSDMSQDSSEEEPEDEQEEDFTQVQFGSSLGVSGG
GMAWESCGDRFTIEACKETEMLNYLIERFDSVGMEEKKAPKICSHPSVSQLLSNIRSQCI
SHAVLVLQGALTQPRSPLQQSLLVPYMLCRNLPYGFIQELARITYQEEEVFRQIFVPILQ
GLGLAVKECSFDSDNFKFPLMALAELCEIKFVKTHPMCNLMTSLPLWCPKSLSPGTGREV
QRLSFLGAFFSLSVFAEDDSKVGDKYFSGPAITTENTRVVSQSLQHYLESARGEMFKILH
NILLNGETREVALNYMAALVNRNVKKAQMQTDDKLVSTDGFMINFLSVLQQLSMKIKLET
VDPYYIFHPHCRLHVSPEETRLKATMEELKTWLAEMYNDPSKFSEPKFPTECFFLTLHTH
HLSILPGCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVR
SKACADAGLLDENLLRRCLQFYSMVIQLILRMVDPAYPHMSLPLNPEIPKSFAALPEFYI
EDVAEFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAV
QLRTQRFSEMMENHPLSVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQ
NMGHHGTFLEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLP
REQQQSRQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNL
QQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSQELFEE
VISKMTKAGIKSTIAIEKFKLLSEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPV
ILPSGNIMDRAIILRHLLNSPTDPFNRQPLNESMLESLPELKERIQAWMREKQGQGRFL
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagtgccgacgagatccgcagaaggagactggccagacttgcaggaggg
caaacatcccagcccagcacccccctcagcactcccctgacgtccccacagagagagacc
cccccttggccccttcctgggacctcaggggccacaccccagcccctaccaccagccgcc
tcacattcacttggtctccatgtccagagtgtcacccccgccacctctcctattggcgca
tctggggtgacgtactgcagtcagagcagcgagggagtgagctccctctccagctctccc
tctaacagcctggagacccagtcccagagtctttcccgatcccagagcatggacattgac
acagcctcctgtgaaaagagcagcatgtcccaggtggatgtggactcggggatagagaac
atggaggtggaggacagtgatcgcagggagaagagggacctggctgaaaaggaatccgct
gagaactcagatgtctctgaagagcaggctctgcagctcatctgtaagatcctacgcgtt
tcctggaaggagcaggacagagacgtcatttttctccccttgctcgccgccgagtttcac
cagagcagcctcaaagacgtcttctctgacttcaaagacctgattggccagatcctgatg
gaggtgctcctgatgtctacccagttgcacgtccacaacccctttgccagcctgactgcc
acgtctgagccaattgctgctgccaaatctcttgaccaccacctgacgctgatccagccc
tccagccagggcagcagtcccatggccccctgtgcaggctcgtttggggccagctctttg
tccagcctgtacgggtgtagtccgcactcgctggctttgaatgcagccaggatgatctct
ccacctctccccacccccaccagcccatcccagcatccaatggtagccccaagtccccct
tccatggcctacccccctaggctctctctcaacctcccttccgcccctctgcctatctcc
cagcgctaccggccctactctgtcacctctcccttggggatctccaccccccctagcccc
agactggctagcctccctgggctttcacgcggccctatcactgaaggtctcccggtaccg
cccatcattctggcccaggccccggccccgccactaccaactagcccccagtcggttccc
ctcccctctactagtcctcatccgcccacctccatgccccttcctctggtacccccctca
cccagatcagctgcccgaggagctgccctcgccacccggatcccgtctagccccctatcc
ctcctgttcttcgccctctctgatatgtctcaggacagcagcgaagaagagcctgaggat
gagcaggaggaagattttacgcaggtccagtttgggtccagtctcggtgtgtccggaggg
ggaatggcctgggaatcctgcggcgaccggttcaccatcgaagcgtgcaaggagacagag
atgctcaactacctcatcgagcgctttgacagtgtgggcatggaggaaaagaaggcgccc
aagatttgcagccaccccagtgtcagccagctcctcagcaacatacgctcacagtgtatt
tcccacgccgttcttgtccttcagggtgccctcacgcagcccaggagtcctctgcagcag
tccctgctggtaccctacatgctgtgccgtaacctgccgtatggctttatccaggagctg
gcccgcattacctaccaggaggaggaggtcttcagacagatctttgttccaatccttcaa
gggctgggtctggctgtgaaagaatgttccttcgacagtgacaacttcaaattccccctg
atggcattagctgagctatgtgaaatcaagtttgtgaagactcaccccatgtgcaatttg
atgacgtctttgcccctgtggtgtcctaagtctctgagcccggggactggccgagaagtc
cagagactctccttcctgggagccttcttcagcctgtcggtctttgcagaggatgactcc
aaagttggtgacaagtacttctcaggccctgcgatcaccacagagaacactcgcgtggtc
agtcaatccctgcagcactacctggagtcagcccggggtgaaatgtttaaaatcctccac
aacatcctactgaatggagagacaagagaggtagctctcaactacatggcagctctggtc
aaccgcaatgtgaagaaagcccagatgcagacggacgacaagctggtgtccacagatggc
ttcatgatcaacttcctgtcagtgctgcagcagctgagcatgaagatcaagctggagacg
gtggacccctattatatcttccacccccactgccgcctgcatgtcagccccgaggagacc
cggctcaaggccaccatggaagagctcaagacctggctggccgagatgtacaacgacccc
tccaagttctctgagcccaagttccccacagagtgtttctttctgacactgcacacccac
cacctgtccatcctaccgggctgccgacgctacatccgcagactgagagccatccgcgag
ctcaacaggaccgtggaggagctgaagaacagtgagagccagtggaaggactctccgctg
gccagccgacaccgagagatgctaaagagatgcaaaacccagctcaaaaaactggtgcgc
tccaaagcctgtgccgacgcagggcttctggatgagaaccttttacgcagatgtctgcag
ttctacagtatggtcattcagctcatcctacgcatggtggatcccgcctacccacacatg
agtctaccgctgaatccggagattcccaaaagctttgctgctctgccggagttttacatt
gaagatgtggccgagttcctgcttttcgttgtgcagtattcccctcaggtcctgtatgag
ccctgcgtccaggacattgtcacttttctggtggtgttcatctgcagtcagaactacatc
cggaacccctacctgatcgccaagctggtggaagtgctttttgtcaccaacccggcggtg
cagctgcgcacccagcgcttttccgagatgatggagaaccaccccctgtccgtcaaacag
ttggtcccggccctcatgaagttctacacagatgtggagcacaccggtgccaccagcgag
ttctacgataagttcaccatccgctaccacatcagcaccatcttcaagagcctctggcag
aacatgggccaccacggcacattcctggaggagttcaactctggcaagcagtttgtgcgc
tacatcaacatgttgatcaacgacaccaccttcctgctggatgagagcctggagtcccta
aagcgcatccatgaggtccaggaggagatgaagaacaaggagcagtgggatctgcttccc
agggagcagcagcagagccgccagtcccagctgacccaggacgagcgggtgtcgcgctct
tacctggcactggccacagagactgttgacatgttccatatccttaccaagcaggtccag
aagcccttcctccggccagagctggggcctcgtctggcagccatgctgaactttaacctc
cagcagctttgcgggccgaagtgccgggacctgaaggtggagaacccagagaagtatggt
tttgagcccaaaaagctcctggaccagcttactgacatttacctgcaacttgactgtgcc
cgctttgccaaggccatcgccgacgaccagcggtcgtacagtcaagaactctttgaggaa
gttatttccaagatgacgaaagccggcatcaagtctaccatcgccattgaaaaattcaag
ctactatcggagaaggtggaggagattgtcgcaaggaactctcagtccgaaatggactac
agtgacgcacctgatgagtttaaagatcctctgatggacaccctaatgacagaccctgtg
atattgccctctgggaacatcatggaccgagccatcatcctccgccaccttctcaactcc
cccactgaccccttcaacagacagccgctcaacgaaagcatgctggagtcactccctgaa
ctgaaggagaggatccaggcatggatgagagagaagcaaggccagggacgtttcctctaa
DBGET
integrated database retrieval system
