Oncorhynchus kisutch (coho salmon): 109908051
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Entry
109908051 CDS
T09179
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X4
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oki01001
]
109908051 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109908051 (trim33)
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109908051 (trim33)
Protein kinases [BR:
oki01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
109908051 (trim33)
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109908051 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
109908051
NCBI-ProteinID:
XP_020362038
Ensembl:
ENSOKIG00005024124
LinkDB
All DBs
Position
LG17:complement(61634515..61661136)
Genome browser
AA seq
1212 aa
AA seq
DB search
MADNKGEEDMESASKLNSEPRGEDSEDPELKDVNSVIVIEPDSKEGDDLLSQENISQMPT
PANVGGGGDASSNSAGAGGAGSTSSSPVGNTNGGTTESSGAGDIAGTSPTFTTEMSPPPT
VPPANPVTPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPQPERQVTVQVPGPNG
QPDTHIVNVMRCIVCCQDCKQSDIIDNYFVKDTTEASNTSDEKSALMCTSCEDNADTIGF
CAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVSASGQRPVFCPVHKQEPLKLFC
ETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGFIETHMAKLQEKKTYVHYSHAHVTSRL
KEVTETHRKVEHEIKIAVFTLINEINKKGKCLLQQLESVTKERSMKLFSQQTDIANLARQ
ILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANGSVRFFCDPTFWAK
NVVNLVGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKHPGQINLAQLRLQHMQQQAFA
QQKQQQQQHQQPHQQQQQHQQRIQEQMRIASQMSQQHPRQGGPPMVQQQPPRLISMQAQQ
RGPMNGGPLMYPPHHMRLAPGQGRMPSPSAQPRMPNGQQYPPMMQPQLQRQHSNPGHAGP
FPVASLHNVSAANPTSPTSASMASAHAHRGPASPIVGAIELIPSVTNPENLPCLPDIPPI
QLEDAGSSSLDALLSRWISASTYPQLGLWPPVDMNPSPGLSTHSPGSSGLSNSHTPVRPS
STSSTGSRGSCGSAGRPVPASAPMEQQVKVKQEPGIEKGCGFSGTTTSNVKTERVKDGGR
SACMMSSPEISRTPPLPVLGSVASASSVQDALKKLGEHVKTEPQDQEACSGANGPSKAPS
TSPSTKASDAPLTNSKGAGPATLRTPRTAMGTNQSGAGGKDDDPNEDWCAVCNNGGELLC
CDRCPKVFHITCHIPTLKCSPSGEWMCTFCRSLASPEMEYEPDDEPRGEKDTNEQGLSPE
DQRRCERLLLNVFCHELSEGFQEPVPPSIPNYYKIIKKPMDLTLVKQKLQLKHVQHYQSP
IEFVSDVRLVFSNCAKYNEEYARTHSKAMAAVQNSTGRSSQMSRIIQVYDEEKQSNVQAD
SEVAQAGKAVSLYFEERLLELYPDESFPEVPEEPEAPVGEGEEADLTEDSEDEFVQPKRK
RLKTDEKMLHIK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagcgcttccaaattaaattcagaacca
cgaggagaggatagcgaggaccccgaattgaaagatgtgaattcggtgattgtcatagag
cccgattcgaaagaaggagatgatttactatcccaagagaatatttctcagatgcctaca
cccgctaacgttggtggaggaggggacgcaagcagcaacagcgcgggcgcagggggggca
ggcagcacaagcagtagcccagttgggaacaccaatgggggtacaactgagtcctcgggt
gctggggacattgctggaacctcaccaacattcacaaccgaaatgtccccaccgccgacg
gttccaccagccaaccccgtcaccccaataaaccttatggatacgtgcgctgtgtgtaaa
caaagtctccagacccgtgactgtgaacccaaactattaccgtgtcttcactcattttgc
ttgaaatgtatcccccagccagagcgacaagttaccgtacaggtgcccgggccgaacgga
cagccagacacccacatagtgaatgtgatgcggtgcatagtttgttgtcaagactgcaaa
cagagcgacatcattgacaactactttgtcaaggacactaccgaggcctccaacacttca
gatgaaaaatctgcactgatgtgcaccagttgtgaggacaacgcagataccataggcttc
tgtgcagaatgtggagagtggttgtgcaagacctgcatcgaggctcaccagagggtcaaa
atcaccaaggaccacaagatccgcaagaaagaggacgtctctgaggagtctgtaagtgcg
tcgggtcagagacctgtgttctgtcccgtccacaaacaggagcccctgaaactcttttgt
gaaacctgtgacacactcacctgtcgggactgccaacttctggagcacaaggagcacagg
taccaatttctggaggaggccttccagaaccagaaaggcttcattgagacacacatggcc
aaattgcaggagaaaaagacctatgtccactactctcacgctcacgtgacaagcaggcta
aaggaagttactgagacccataggaaggtggagcatgagatcaagatagctgtgtttact
cttatcaatgaaatcaacaagaagggcaagtgtttactgcagcaacttgagagtgtgact
aaggagaggagcatgaagctgttttcccagcagacagacatcgccaacctggccaggcag
atcctccacgtgctcaactttacccactctgccattaacagcggcagcagcaccgccctg
ctttacagcaagaggctgatcatctaccagctgcgcaaggttctgaaggctggactggaa
ccagtgcctcaagctaatggttctgttcgctttttctgtgaccccacattctgggctaag
aatgtggtcaacctagtagggaacctggtgattgagaagatgccccaagctcagcaccct
cccaacattatggtggggcccatctccccgggccatggccacccaggccacggaaaacac
ccagggcagatcaaccttgctcagctccggctgcagcacatgcagcagcaagccttcgcc
cagcagaaacaacagcagcagcagcaccaacaaccacaccagcaacaacagcagcaccaa
cagaggattcaggagcagatgcgtattgcttcccaaatgtcccagcagcaccctaggcag
ggtggacctccgatggtacagcaacagcccccgcgcctcatcagcatgcaggcccagcag
aggggccccatgaacggcggtcccctcatgtaccccccccaccacatgcgcctggccccg
ggacagggccgcatgcccagccccagcgcccagccacgcatgcccaatggccagcagtac
ccccccatgatgcagccccagctgcagagacagcattctaacccaggtcatgctggaccc
ttcccagtggcctctctccacaacgtgagcgctgccaaccccaccagtcccaccagtgcc
agcatggctagtgcccatgcccaccgtggccccgccagccccatagtgggcgccattgag
ctcataccctctgtcaccaacccagagaacctgccctgcctaccagacatccctcccatt
cagctggaagacgcaggctccagcagtctggacgccctcctgagtcgctggatctcagcc
agcacataccctcagctgggcttgtggccccctgtggacatgaacccctccccgggactc
tccacacactcacctggctcctcaggcttatcaaactcccacacgcccgtgcggccatcc
agtacttccagcacaggaagcaggggcagctgtggctctgcggggaggccagtgccagcg
agcgccccaatggaacagcaggtcaaagtcaagcaggagcccggaattgagaagggctgt
ggcttctctggaaccaccacctccaacgtcaaaacggaacgagtgaaggatggggggagg
agcgcgtgcatgatgagtagtccagagatcagccggactccccctctccccgtgctgggc
tctgtggcttccgcctcctctgtccaggacgccctcaagaagttgggggagcacgtcaaa
actgagccccaggaccaggaagcctgcagcggggccaacgggcctagcaaagcccctagc
accagcccatccactaaggcctcagatgccccgctgaccaacagcaagggagccgggcct
gctaccctgcgaactccacgcactgcaatggggaccaaccagagcggggcgggagggaag
gatgatgaccccaacgaggactggtgcgccgtgtgcaacaatgggggagagctgctttgc
tgtgaccgctgccccaaagtcttccacatcacctgtcacatccccaccttgaagtgctcc
ccgagtggagagtggatgtgcacgttctgccggagcctggccagcccggagatggagtac
gagcctgacgacgagcctcgtggcgagaaagacaccaatgagcagggcctgagtcctgag
gaccagaggaggtgtgagcgtctcctgctgaacgttttctgccatgagctcagcgagggg
ttccaggagcctgtccctccctctatccctaattactacaaaatcatcaagaagcccatg
gacttgacgctggtgaaacagaagctacagttgaagcacgtccagcactaccagagcccc
atagagtttgtctcggacgtgcgcctggtcttcagcaactgtgccaaatacaacgaggaa
tacgccaggacccacagcaaggccatggctgctgttcagaattcaacaggcagaagcagc
cagatgtctcgaataatccaggtatatgatgaggagaaacagagtaatgtgcaggcggac
tcggaggtggcgcaggcagggaaagccgtgagtttgtactttgaagagaggctgctggag
ctatacccagacgaaagtttccctgaggtaccagaggagcctgaggcccctgttggagag
ggagaggaggcagatctcacagaagactcagaggatgagtttgtgcagcctaaacgcaag
cggttaaaaacagatgaaaagatgcttcacatcaagtga
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integrated database retrieval system
