KEGG   Oncorhynchus kisutch (coho salmon): 109908052
Entry
109908052         CDS       T09179                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109908052 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109908052 (bcas2)
   03400 DNA repair and recombination proteins [BR:oki03400]
    109908052 (bcas2)
Spliceosome [BR:oki03041]
 Complex B
  Other components
   Prp19 complex
    109908052 (bcas2)
 Complex C
   Prp19-CDC5 complex
    109908052 (bcas2)
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    109908052 (bcas2)
SSDB
Motif
Pfam: BCAS2 THOC7 RRP36 Rv0250c
Other DBs
NCBI-GeneID: 109908052
NCBI-ProteinID: XP_020362045
Ensembl: ENSOKIG00005024913
UniProt: A0A8C7HHA2
LinkDB
Position
LG17:complement(61668458..61674115)
AA seq 225 aa
MAGTSSVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYMPTPDFTT
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQESVNNSMAQLEHQAVR
IENLELMAHYGTNAWKVYNDNLAFMIELAQKELQKCRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVGQLKQQHGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggctggaacttcatcagtagctggtgaagtatttgtcgatgccctaccgtattttgac
cagggttatgatgcagcgggcgttagagaggcggctgcagccttggtagaggaggagact
cgccgatacagacccaccaagaactacctcagttatatgccaacacctgatttcactaca
tttgaaactgaaatcatgaggaacgagtttgagagactagcagcccggcagcccctggaa
cttctcagcatgaagagatatgagcttccagctccatcatcagggcagaagaatgacatc
actgcatggcaggagagtgtgaacaactccatggctcagctggagcatcaagcagtgcgc
attgagaacctggaacttatggcacactacggtaccaatgcatggaaggtctacaatgat
aacctggcctttatgattgaattggctcaaaaagaactacagaaatgtagaaagcagatt
caggacttgaactggcaacggaagaatgatcagcttgcaggcggggccaagctgagagag
ctggagtcaaattgggtgtccctcgtaagtaagaactatgagattgaacgtgccatcgtc
cagttggagaatgaagttggacagctcaaacagcagcatggtgacgagaacaaggaaaac
attcgacaggacttctag

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