Oncorhynchus kisutch (coho salmon): 109908108
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Entry
109908108 CDS
T09179
Name
(RefSeq) UHRF1-binding protein 1 isoform X1
KO
K28453
bridge-like lipid transfer protein family member 3A
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109908108
Membrane trafficking [BR:
oki04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
109908108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLTP3A_B
VPS13_N
Motif
Other DBs
NCBI-GeneID:
109908108
NCBI-ProteinID:
XP_020362168
Ensembl:
ENSOKIG00005038520
ENSOKIG00005038575
LinkDB
All DBs
Position
LG17:complement(65302988..65363313)
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AA seq
1354 aa
AA seq
DB search
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLSNLELDEEVLQNMLDLPTWLAVTR
VYCNKAAIRIQWTKLKTSPICLFLDKVEVEMRTCEEPRAPNGPSPIAITAGQSEYGFAEK
VVEGMSVIINSITIKVQSRAFHASFELWQLQGNSLNPKWQKTDLRYTRITDPKRGEVLTF
KEINWQSLRIEADAIESEDQDLGSIPLRLITNQGRIRIALKRRVKDCNVLASKLLFILDD
LLWVLTDSQLKAVIHYAKSLSEAMEKSAQQRKNMAAESLQTAPPSPGIHNLWTDPSPPPS
VGVPSTLDQYFDQHDVKESSYHTFISRLDLHICNDSSSTDPDEPPPPGSQGAMQLTFRKL
GFDYYPIHRPADGCQHWERHCGAMEARAQWACRLLQEFQRRVEASGIPGPHSEIPNQAKD
SPAKRAHDGQPSPPDRDQRSRRNSIAPPPPGNPLKRLRSSCVVVRMDDLDIHQVSTGGRH
SKKTQSLISCNRKALNLADNIPAIHLQFTEYYFPDNPGLPVPNTNLYAQLNGLQLCLDPA
SLLWVNLFSRGLLRTLEQVKAFYQLQDGSKAEEHVDIRMDAAQIKLIIPLESSIMDHQDR
PQSLNITVPQMVLSNTCHSPHGTRADLNATYSSFSTCHFFQSAPPCSFPRDQSAFLPLPS
AFLQHSLEMEPLPFSEMRPLRAKDVWSLSLSRLSVSFEGARKSNKGRAHPFVEPFTMSVW
ICCPCAFKGCSLVSSPIEPAPVDPNHGSLEQENQLPSNPDHHNQDSKKEAPVASIHFLAQ
AITPVKVWLNHYQYVALLRMKDTLARLGGELGRDTRDAKQARGQESEPPTMCLALLMDSV
ELGLLLPPAAMEPEEEEAHTPGSESPSLTDSDLSPTHQASSPGPLEDSGIGNGTATVNSS
PPIEQEVDGVVEEASEAVEVMEGETTQEDGPVPSPPFSPEHHPSLLSRDPSTFSLEEELS
NALTATKDVTKDAFSASLDLTKGAFSITKDAFSFMSRGSGMSKLFTTQAKEQRPEEGCPM
ASLRLQSMKLSLSQYSFDSAILDGSLPDDHLSVDSDSSDNILMDESGVESMMRPNSTLGP
MDSGGSAAPGTEGGLSADLSSSPSQSIEDITQDTASVLLLVLSGIACVADLKGEDLVVAV
EVQHLTSRQMGNVRVSDLLARQMSGGSTLGQRQGCRSAPVVGMRIEMGPSAARHGPLSAL
VGHLELGVQGCRAELLASTLATLGPFLEDELSADVQPMKIRLDNVTITLKDDGPKIYPTA
PQPQPATFTIDQVVLERSDDGLFRIKGGAGPDSAGGAVVCLEKPDSSCSVQPQQSMSPSL
GSQLLEAQLALSQALTDRERLLLEVRKYDPMFDL
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaataataaaaaaacaaatattgaaacatttgtccaggttcaccaagaacctg
tctccagacaagataaacctgagcacactgaagggcgagggtcagctgtccaacctggag
ctggatgaggaggtgctgcagaacatgctggacttgcctacctggttggctgtcacccgg
gtctactgcaacaaggctgcaatcaggatacaatggacaaagttgaagaccagccccatc
tgcctgttcctggacaaggtggaggtggagatgagaacgtgtgaggagccccgtgcacca
aatggcccctcccctattgccatcactgctggccagagtgagtatggcttcgctgagaag
gtggtggagggtatgtctgtcatcatcaactccatcaccatcaaggtgcagtcccgtgcc
ttccacgcctccttcgagctctggcagctccagggtaacagtctcaaccccaaatggcag
aagactgacctccgctacacccgcatcacagaccccaagagaggagaggttttgacgttt
aaggagatcaactggcagagtctgcgtatagaggctgatgccatagagagtgaagaccag
gacctgggcagtatcccactacgcctcattaccaaccagggacgcatccgcatcgccctg
aagcgcagggtgaaggactgtaatgttctggcctcgaagctgctcttcattttggacgac
ctgctgtgggtgctgacggactctcagctcaaagctgtcatccactacgccaagtccctg
agtgaggccatggagaagtctgcccagcagaggaagaatatggctgcagagtctctacag
actgcacccccatcccctggtatccacaatctatggacagacccttcaccccctcccagc
gttggtgtacccagtaccctggaccagtactttgatcaacacgacgtcaaagagtcctcc
taccacaccttcatctctcgtctagacctgcacatatgcaacgacagctcctcaacagac
cccgatgagcctccacctccaggctctcagggtgcaatgcagttgaccttccgcaagctg
ggttttgactactaccccatccaccggcccgctgatggctgtcagcactgggagcgtcac
tgtggagcaatggaggcccgagcccagtgggcttgcagactgctgcaggagttccagagg
agggtggaggcgtcaggtatccctggtccacattctgagatccccaaccaggccaaggac
tcccccgccaagagggctcacgatggacagcccagcccccctgatagggatcagaggtcc
aggaggaactcaatagcacctcctcccccggggaatcctttgaagaggctccgctctagc
tgtgtggtggtacgaatggacgaccttgatatccatcaggtgtctacagggggacgccac
agcaagaagacccagtccttaatatcctgtaaccgcaaggccctgaacctagcagacaat
ataccagccatccacctgcaattcacagagtattacttccctgacaaccctggtttgcct
gtacccaacactaacctgtatgcccagctgaacggcctacagctgtgcctagacccagct
agtctgctgtgggtcaacctgttctcgcggggcctgctgcgtaccctggagcaggtcaaa
gccttctaccaactccaggacggcagcaaggcagaggagcacgtggacatccgcatggac
gcagcacagatcaaattgattattcccctggagtcatccatcatggaccaccaagacagg
ccccagtctctgaacatcactgttccccagatggtcctcagcaacacctgccactcccca
cacggcacccgggccgacctcaacgccacctacagcagcttctccacctgccacttcttc
cagtccgctcccccatgctccttcccccgagaccagagcgcctttctccccctaccctct
gccttcctccagcactccctggagatggagcccctgcccttttctgagatgaggcccctc
cgggccaaggacgtctggtccctaagtctctcccgcctgtctgtgagcttcgagggggca
cggaaaagcaacaagggcagagctcaccccttcgtggagcctttcaccatgtctgtgtgg
atatgttgtccatgtgcgtttaagggctgttccctggtctcctctcccattgaaccagct
cctgtagatcccaaccatggatccttagagcaggagaaccagctcccttccaaccctgac
caccacaaccaggacagtaaaaaggaggctccagtggcctctattcacttcttggcccag
gccatcacaccggtcaaagtgtggctcaaccactaccagtatgtggccctgctgcggatg
aaggacaccctggccaggctggggggcgagctgggccgggacaccagggacgctaagcag
gccaggggccaggagtctgagccccctacgatgtgcctagccctcctaatggactcagtg
gagctggggctcctgctaccacctgcagccatggagccagaggaggaggaggcccacacc
ccaggatctgaaagccccagcctgacagactctgacctctcccccactcaccaggcttca
tcgccaggccctcttgaggacagtgggataggaaacggtactgccaccgtcaacagctct
cctcccattgagcaggaagtggatggtgtggtagaggaggccagcgaggcagtagaggtc
atggagggggagacaacccaggaggatggtcctgtcccctctcctcccttctcccctgaa
caccatccctccctcctgtctagggacccctctaccttcagcctggaggaagagctgtcc
aacgccctcaccgccaccaaggatgtcaccaaagatgcctttagtgcctccctggacctg
actaaaggggcgttctccatcacaaaagatgccttcagcttcatgagtcgcgggtcaggg
atgagcaagctgttcactacacaggccaaggagcagcgccccgaggagggatgccctatg
gccagtctgcggctccagtccatgaagctgtctctctcacagtactcatttgacagcgcc
atcctggacggaagcctgcccgacgaccacctctcagtggacagcgactctagtgacaac
attctcatggatgagtcaggagtagagtccatgatgcgacccaacagcacccttgggccc
atggacagtggaggcagcgctgccccggggacagagggagggttatcagccgacctgagc
agctccccatcccagagcattgaggacatcacacaggacacagcctctgtgttgttgctg
gtgctcagtggtattgcctgtgtggcggacctgaagggagaggacctggtggtggcagtg
gaggtccagcatctcacctccagacagatgggcaacgtaagggtctctgacctgctggcc
agacaaatgtcaggtgggtccaccctgggacagagacagggctgcaggtcagctccagtg
gtgggcatgcgaatagagatgggtccctctgcagcacggcacggtcccctctctgcgttg
gtaggtcacctggagctgggtgtgcagggctgtcgggcggagctcctggcctccaccctg
gctaccctggggcccttcctggaggatgagctcagtgctgatgtccagcccatgaagatc
cgcctggacaatgtcaccatcactctgaaggatgatggtcccaagatctacccgacggcc
ccccagccccaacctgcaacctttaccatagaccaggtggttctggagcgctctgatgat
ggcttgtttagaatcaaaggtggtgcaggcccagactctgcaggtggtgctgtggtatgt
ttggagaaacccgacagttcttgttctgtccaaccacagcagagcatgagtccatccctg
gggtcccagctattggaggctcagttggccctctctcaagcgctcactgaccgagaacgt
ctcctcctggaggtcaggaaatacgaccccatgtttgacctgtga
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