Oncorhynchus kisutch (coho salmon): 109908152
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Entry
109908152 CDS
T09179
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109908152 (apex2)
Enzymes [BR:
oki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109908152 (apex2)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109908152 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
109908152
NCBI-ProteinID:
XP_020362257
Ensembl:
ENSOKIG00005006331
UniProt:
A0A8C7D325
LinkDB
All DBs
Position
LG17:67687196..67690504
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AA seq
594 aa
AA seq
DB search
MKIVSWNINGIRTFKGGIKNALESLDADIVCVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTTNHEGTIGCYGDLSEFSSEELQLLDNEGRA
VLTQHRVMCEDTPETVTVINVYCPRADPEKPERKHFKLQFYKLLQCRAEAILETGSRVII
LGDVNTSHRPIDHCDPDYIDDFEDHPGRKWLNGLLVDDSEGKEYEKNNEESENTSSKPLR
SGKFVDTFRHFHPTRSKAFTCWNTMTGARQTNYGTRIDYIFADHPLVKMGFVAADIMPEV
EGSDHCPVWGKLCCPLLSSAKLPPLCTRNLPEFAGRQQKLSRFLVKMDQQQPAREACRDP
LPGSQETGETRENLNPLGSAGTTSTGMKRKLAVESCVPKSKKIMTLKAATPKPQGNLLAF
FKPKSIPVAPTREDPVSQCERGEERNEVSPSQPHTFKGGHSAGQDVPSIPGTPCTEYPQG
VCMRDKVHVPGSNIQDASVNSQNQEKDAALASEATVDPPCPRKGASLGGFWKTVLRGPPP
PPPCKAHGEPCVLRTVKKAGPNMGKQFFVCNRPQGHASNPEARCNYFSWVDKGK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcagttggaacattaatggcataagaactttcaagggcggaattaaaaat
gcgcttgagtcgctggatgctgacatcgtatgtgtccaagagacaaaagtaacaagagac
ctgctggatgagaggactgctattgttgaaggttataactcatatttcagctttagtcgt
ggacgcagtggctactcaggagttgctacttactgcaaagacagtgccaccccatttgct
gcagaagagggcttgaccggtctgctgaccaccaaccacgagggaaccattggatgctat
ggtgacttgagtgagttctccagtgaggagctgcagctcctggacaacgagggaagggct
gttctcacacagcacagagtcatgtgtgaagacacacctgaaacagttacagttatcaat
gtatactgcccacgagctgacccagaaaagcctgaacgtaaacatttcaaactgcaattc
tacaagctgcttcaatgtcgggctgaagcaattttagaaactgggagccgtgtaatcatc
ttgggagatgtgaatacatcccaccggcccatagatcactgtgacccagattacatagat
gattttgaggatcaccccgggaggaaatggctaaacggtttactggttgatgacagtgaa
ggaaaggagtatgaaaaaaacaatgaggagtctgagaatacctcatcaaaaccgctccgc
agcggcaagtttgtggacaccttccgccattttcacccaacacgctccaaggccttcacc
tgttggaacactatgactggagccaggcagaccaactatggcacacgtatcgactacatc
ttcgcagaccatcccttggttaaaatggggtttgtggcagcagacatcatgccagaggtg
gaggggtctgatcactgccctgtctgggggaaactgtgctgccccctcctgtccagcgcc
aagctgcctcccctctgtacccgcaacctaccagagttcgctggcaggcagcagaaactc
tcacgcttcctcgtcaagatggaccaacaacaacctgccagagaggcttgcagggaccca
ctaccaggatctcaggagactggggagacccgagagaacctgaatccactgggatcagca
gggaccacctctactggaatgaaacggaagttggcagtggaatcttgtgtcccaaagagc
aaaaagattatgacactgaaggctgctaccccaaagccccagggcaacctcctagcattt
ttcaagcccaaatccatacctgtggccccaaccagggaagaccctgtgagtcagtgtgag
aggggagaagagagaaatgaagtgagcccatcacaaccacataccttcaagggaggacat
tctgcaggacaagatgttccatcaattccaggcacgccatgcacagaatatccccagggt
gtctgtatgagagacaaagtccatgtaccgggcagcaacatacaggatgccagtgtcaat
agtcaaaaccaggagaaggatgcagccctggcttctgaggctactgtagaccccccatgt
cccaggaagggggcttcactgggtgggttctggaagacggtcctgcgtgggccaccccca
ccgcccccctgtaaggctcatggggaaccctgtgtactccgcacagtcaagaaggcaggt
ccaaacatgggcaagcagttctttgtgtgtaaccgccctcagggccatgcatccaatccc
gaggctcgctgtaactacttttcttgggtggataaaggaaaatag
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