Oncorhynchus kisutch (coho salmon): 109908213
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Entry
109908213 CDS
T09179
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109908213
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109908213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109908213
NCBI-ProteinID:
XP_020362353
Ensembl:
ENSOKIG00005017537
LinkDB
All DBs
Position
LG17:69443889..69452006
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AA seq
678 aa
AA seq
DB search
MDPQDLPATDAPLTVNEQPLGSCTLKYPAKDNQVIVMSGHETIRVLEVEVDQASLPSSVP
DGRTDSGGEDGGNQATEEPEAGMQDSQRPPHNAGGVGEPFVGYRYVLEDQVVSVESADSG
VQTLAQTAVPISVSLSQSQTTMPITVQSLQGLQGCQQVLTQEGLATLMTGMMAQTGSLAQ
PLLIPISMAGSMGGQGGLAVLTFPTSNVATLPGISGASQAGSLLKLPFAGLQGLQGLQGL
QGLQTATVLNSVQPQQTVFQPQTASLQQVQAAMQQAQQTVFQPQTASLQQVQAAMQQAQQ
NSQVTAAQLGQAMPAVSQPSVSVATLQSAGLSINPAIISAASLGAQPQFISALTSTPIFT
SAMSGITSQIITNAQGQVIGTIPLMLNPASLTGGAATQTLNLQGLQGLQGLQVQTVQPQL
VLNTQGQIIATIGNGPATVPTSAAVMPKPSAPVTFSKPSTQAQVTTVTQSPVVIAPQPSA
MKTVTPISSSFPITCGDTPTVSQLVSKPQQGGTDEEGINLEEIREFAKNFKIRRLSLGLT
QTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLERWLAEAELWNQKGQQNLM
EFVGGEPSKKRKRRTSFTPQAIEVLNTYFEKNALPTGQEITEIAKELNYDREVVRVWFCN
RRQTLKNTSKINAFQVQL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcaggatctccctgctactgatgcgcccctcactgtcaatgaacagccatta
ggttcctgcactttgaaataccctgccaaagacaaccaggtgatagtgatgtctggtcat
gagacgatccgagtcctggaagtggaggtagatcaagcctctcttccatcctcagtgcct
gatgggaggactgattcggggggtgaagatgggggtaatcaggccacggaggaacctgag
gcaggcatgcaggacagccagagaccaccccacaacgctgggggagtaggtgagcccttt
gtaggataccgatatgtgctggaggaccaggtggtgtctgtggagtctgcagactctggt
gtccagactctagcacagactgcagttcccatcagcgtctccctgtcgcagtcacagacc
accatgcccatcactgtgcagagcttacagggcttgcagggctgtcaacaggttctgacc
caggagggtctggccactctgatgacggggatgatggcccagacaggctccctggcccag
cccctgctcatccccataagcatggcagggtccatggggggccaaggaggcctggctgtc
ctcaccttccccaccagcaacgtagccacactccctggcatttcaggtgccagccaggcc
ggaagcctcctcaaactaccctttgctggcttgcaaggcttacaaggattgcaaggctta
caagggctgcaaacagccactgtgctaaattctgtccagccccagcagacagtcttccag
cctcagacagcatcactacagcaggtccaggcagctatgcagcaggctcagcagacagtc
ttccagcctcagacagcatcactacagcaggtccaggcagctatgcagcaggctcagcag
aactcacaggtgactgcagcccaactaggccaggccatgccagccgtctctcagcccagc
gtgtctgtggcaacactccagtctgcaggcctctccatcaatcctgccattatcagtgct
gcgtctttaggggctcagcctcagttcatcagcgcccttacttccactcccatcttcacc
agtgccatgtccggaatcaccagccagatcatcaccaacgcacagggacaggtgattgga
accatccccctgatgctgaaccctgcatcactgactggaggggctgctactcagactctg
aatctccagggcctccagggtctgcaaggcctgcaggtgcagacagtccagccacagctg
gttctgaacacccagggccagatcattgccaccataggaaatggacctgctacagtcccc
acatctgcagctgtaatgcctaagcctagtgctcctgtgacattctccaagcccagcact
caggctcaggtaacaacagttacacagtcacctgtggtcatcgccccacaaccttctgca
atgaagacagtcactccaatctcctcctcattccctataacctgtggagacacacccact
gtcagccagctcgtcagcaagccacagcaagggggcacagatgaggagggcattaatctg
gaagagattcgagagtttgccaagaacttcaagatccgccggctatccctggggctgacg
cagacacaagtgggacaggccctcacggctacagagggtccggcctacagtcagtctgct
atctgcaggtttgagaagctggacattacacctaagagtgctcagaagctgaagcctgtg
ctggagcgatggctggccgaagctgagttgtggaaccagaagggtcagcagaatctaatg
gagtttgtgggtggtgagccgtccaagaaacgaaagcgtcgcaccagctttaccccgcag
gctatcgaagtgctcaacacctactttgagaagaatgccctgcccacgggccaggagatt
acggaaattgctaaggagctcaactacgaccgtgaggttgtccgcgtatggttctgtaac
aggcggcagacactgaagaacaccagcaagatcaatgcgtttcaggttcagctgtaa
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