KEGG   Oncorhynchus kisutch (coho salmon): 109908283
Entry
109908283         CDS       T09179                                 
Name
(RefSeq) cyclin-T1-like isoform X1
  KO
K15188  cyclin T
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109908283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109908283
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     109908283
    Brd4/P-TEFb complex
     109908283
    7SK RNP complex
     109908283
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 109908283
NCBI-ProteinID: XP_020362477
Ensembl: ENSOKIG00005041583
LinkDB
Position
LG17:73472526..73484071
AA seq 701 aa
MAASFPSPSGTNNKWYFTREQIENSPSRRVGLDPDKELSYRQQAANLLQDMGQRLNVSQL
TINTAIVYMHRFYMIQSFTRFHRNVIAPATLFLAAKVEEQPRKLEHVIKVTHACLNPQDP
SPDVRSDAYLQQAQDLVILESIILQTLAFEITIDHPHTHVVKCTQLVRVVPASKDLAQTS
YFMATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIPVSTDGKHWWEYVDNTVTLELL
DELTHDFLQILEKTPSRLKRIRNWKAAGQTVKGGKSKVPEDGDQTDCMMSMISMSSSETT
LASLSNPSSSSMAPILLELKSTLGSGSDQPNHVELHAPAKVSLSEYRAKHADVLAAQKRK
LENMEASVKREYASAAQALIGQHQRKEKYHHDQPQSSSHHSSLASSDLSSPSPIILKIPL
EKERGERSSLKMRLPLGTGGGGGHSGGGNRGAGGEQDIKVRIRVPEKVRSAGSGEEGGKS
REGKHRDRSHHHHHHHHHHSSSSLSGASVSSSSSHKHSASAAGAVGGSGSKKTPSDSSRM
SSSSASRKRTHSTESQGSHPSKVSKSSRNSAYQLPALLAASSAHSLGAQTAEILPSLGLP
SLHQGNFSHSKGDKTDTNGHNAGGGSQSNEYQDTFEMLNSLLSAQGVQPAQPPMFDYRSQ
YGEYRYSGGSRGGSRPPPLPAEPPPPLPPFTQMIPDEGVNY
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggcggcttcgttcccttctccttctggaacaaacaacaaatggtacttcacccgagaa
cagatcgagaatagcccatctcgtcgtgtggggcttgatccagacaaggaattatcctac
agacagcaagccgcgaaccttctacaggacatgggacagcgactcaatgtgtcccagcta
acaattaatactgctattgtgtatatgcaccgattctacatgatccagtccttcaccagg
ttccacagaaatgtcatagctccagcgacactgttcctggctgcaaaggttgaggaacag
ccccgcaagttggagcatgttatcaaggtgacccatgcatgcctcaaccctcaggaccct
tcaccagatgtccgcagtgatgcttacctgcaacaagcccaagacctggtcattcttgag
agcattatactccagaccctggcttttgaaatcaccattgaccacccacatactcatgtt
gtcaagtgcacccagctcgtcagagttgtcccagcgagtaaggatttggcccagacctca
tacttcatggctaccaacagcctacacctgaccacattctgcctgcagtacagcccaccc
atagtggcctgcgtctgcatccacctggcttgcaagtggtccaactgggagatccctgtc
tccacagacggcaagcactggtgggagtatgtggacaatactgtcacccttgagctgctg
gatgaactcactcacgacttcctacagatcttggagaagacaccaagccgattaaaacgc
attcgcaactggaaagcggcaggtcagacagtgaagggagggaagtctaaggtgccagag
gacggggaccagacagattgtatgatgagcatgatctccatgtcgtcctcggagaccacg
ctggccagcctctccaacccttcctcttcatccatggctcccatactactggagctcaag
tcgaccctgggcagtggctccgaccagcccaaccacgttgagctacacgccccagccaag
gtgtcactgagtgagtaccgggccaagcacgctgatgtcctggctgctcagaagaggaag
ctggagaacatggaggccagcgtgaagagagagtatgcctcggcagcccaagctctgata
ggccaacatcagaggaaggagaagtaccaccatgatcaaccgcagtccagctcccaccat
tccagcttagcctcctctgacctcagcagcccctcgcccatcatcctcaagatccccctg
gaaaaggagaggggcgagcgcagctccctgaagatgcgcctccctctggggactggggga
ggaggggggcacagtggaggagggaacagaggagctggaggagaacaggacatcaaagtg
agaatccgggtgcctgagaaagtacgcagtgcaggctcgggagaggaggggggcaagagt
agggagggcaagcatcgagatcgctcccaccaccaccatcaccaccatcaccatcattca
tcgtcgtctttgagcggtgcttccgtctcttcgtcctcgtcacataaacactcagccagt
gctgctggagctgtaggaggaagtggtagcaaaaagacccccagtgactcatctagaatg
agctcttcctctgcttctcgaaagaggacacactccactgagtcccagggatcccacccc
tccaaagtctctaagtcctccaggaactcagcctaccagctacctgctctgttagctgcc
tccagtgcacactccctgggggcgcaaactgctgagatcctcccatccctgggtctcccc
tccctccaccagggaaacttctctcactccaagggggacaagactgacactaacggacac
aatgcaggcgggggaagccagtcaaatgagtaccaggacacatttgagatgctgaactct
ttactgagtgctcagggggtccaacctgctcagcctcccatgtttgactaccggtctcag
tacggggagtacagatacagtggagggtcaagggggggctctcgaccgccacccctgcct
gctgaacctccacccccgctacccccctttacccaaatgatccctgatgaaggggtgaat
tactga

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