Oncorhynchus kisutch (coho salmon): 109908301
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Entry
109908301 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-C1a-like
KO
K09301
homeobox protein HoxA/B/D1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109908301
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
109908301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
Homez
Motif
Other DBs
NCBI-GeneID:
109908301
NCBI-ProteinID:
XP_020362509
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Position
LG17:complement(74011173..74015017)
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AA seq
327 aa
AA seq
DB search
MNLYQELTCDGESSALFAGGHRPGEVRIGDLGQIISPELGAGNEGNSLSEGDPGYSLQHS
YPYFSGANSATDCTVTQLPVYSGSSSSPLTQSQGFSTTPPACIHYSRLPSYLRVQEHDFP
GLGYSSSTHITGTEALAHAEFGSINAHIKIYTHDGSNVHFAVVDSSSHSDPKCKVPELSH
RSKTFDWMNVKKRSQVRTAKMHMACGLSIVAPGVSMDRGGGGNHSIPTDGHHITANGVLR
TNFTTKQLTELEKEFHFNKYLTRARRVEIASALQLSETQVKIWFQNRRMKQKKLMREGLL
PVAFRVLELLRKLTLQQPGHLFLSWTT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtatcaagagttaacgtgcgatggggagagtagcgctctgttcgcaggggga
caccgaccaggggaggtcaggataggtgacttgggccagatcatttctccagaacttgga
gctggcaatgagggtaactctttatcagagggtgacccgggatattcattacaacacagt
tacccgtatttctccggtgccaattctgcgaccgactgcacggtaactcagctaccagtc
tactcaggctcgagcagctctcctctgacacagagtcagggcttttcaaccacgccaccg
gcctgcattcactactctcgtctcccctcctacctccgggtgcaagaacacgacttcccg
ggacttggatactcctcttccacacacatcaccgggactgaggcgctagcgcacgcagaa
ttcgggtctataaatgcgcacattaaaatctacactcacgatgggtctaatgttcacttt
gctgttgtggacagtagctctcactccgaccccaagtgtaaggtacccgaactaagtcac
aggagcaaaacttttgattggatgaacgtgaagaagagaagtcaagtccggacggccaag
atgcacatggcctgtggattaagtatagtcgctccgggcgtcagtatggacagaggaggt
ggaggtaaccacagcattcccaccgatgggcatcatattaccgctaacggggtactaagg
accaatttcaccaccaaacagctcacagagctcgagaaggagttccacttcaacaagtac
ctgacgcgagccagacgcgtggagatcgcgagtgccctgcaactgagcgagacgcaggtg
aagatttggttccagaaccggcgcatgaaacagaagaaattaatgcgcgagggtcttctc
ccggtggccttccgtgtcctcgagctgctcagaaagctcacgctccaacagcctggacac
ttattcctctcctggacaacttga
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