Oncorhynchus kisutch (coho salmon): 109908359
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Entry
109908359 CDS
T09179
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109908359 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109908359 (dhx36)
03012 Translation factors [BR:
oki03012
]
109908359 (dhx36)
Enzymes [BR:
oki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109908359 (dhx36)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109908359 (dhx36)
Translation factors [BR:
oki03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109908359 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
NB-ARC
ATPase
AAA_16
T2SSE
Motif
Other DBs
NCBI-GeneID:
109908359
NCBI-ProteinID:
XP_020362593
Ensembl:
ENSOKIG00005038734
LinkDB
All DBs
Position
LG15:85970236..86035886
Genome browser
AA seq
1077 aa
AA seq
DB search
MSYGGYGGRGGRRGGRRGGRGFGRDGSRERWDRLAGSSGGGHPRSTETESREDRGERGGR
GGGPNRPPPHLKGREIGLWYAKWGGLKRKENERKSRAVVQMDESREQHITNLLNTVQRGP
TCPASEAHPSTSEHWRSTPSAPDRGSHCYFDGDEPSQDVLKIDLKQEKKEDEERPVQNTP
LTSQRYFPQDVLKAEPQDEREEKERRGKDKDLEYLFQEVVRENALDQQLKRDLERKKADS
KYLDMLKFREKLPSFGKKEELVELIRSSQVLVVSGETGCGKTTQVTQFILDDYIERGMGS
VCRVVCTQPRRISAISVAERVAAERAESVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGII
LQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRQDLKVILMSATLNAEKFS
KYFNNCPMIHIPGMTFPVQEFLLEDVLEMIRYRPQKKEQRPRWKRGFMQGQNSRPEKDQK
EAEYKESWPCYARTLRDKYSDRTIDVLEMMDDDDKIDLELIVQLIRHIVLSQEEGAILVF
LPGWDNISGLNDLLMAQQMFKSDRFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIA
ETSITIDDVVFVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVCPGKCYHL
YNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAVTLAITHL
MDLNALDRSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIP
MGKEKMADFRRRTLSRDSKSDHLTIIYAFTGWEEAKRRGYKFEREFCWDNFLSANTLQML
HNMKGQFAEHLLGAGFTSSKNPKDPESNTNSDNEKLIKAVIVAGLYPKVAMIKPSGSKKR
PVRVYTKTDGKVCIHPKSVNAEETQFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGG
DVTIQMDQDQETIAVDDWIVFQSPARIAHLVKNLKKELDSLLEEKIRSPAPVDWSNRQSK
DCAVITAIIDLITTQERPDVNARNTEPRGRRQYHNNDDGDEYENCCISSQPREKLRP
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggaggttatgggggcagaggcggccgacgaggtggccgaagaggaggtcga
ggattcggacgggatgggagccgggagaggtgggaccgcctagctggatcgagtggtggt
ggacacccgcggagcaccgaaacggagtcgagggaggaccggggagaacgaggagggaga
ggtgggggaccaaaccgtccacccccgcatctaaagggccgggagatcggactgtggtac
gccaaatggggaggcttgaagaggaaagaaaatgagagaaaatcgcgggcagtggttcag
atggatgagtccagggaacagcatatcactaatctgctgaacactgtccagagaggaccg
acatgcccagccagcgaggcccacccctccacatctgagcactggcgttcaaccccgtca
gcaccggacagaggcagccactgttactttgatggtgatgagccctctcaggatgtcctg
aaaattgatctcaaacaagagaagaaggaggatgaggagaggccagtacagaacactcca
ctcacatcacaacgttacttcccacaggatgtccttaaagctgaaccccaagacgagagg
gaggagaaggagaggagagggaaggataaagacctggagtacttgtttcaggaggtggtc
agggagaatgccctggaccagcagttaaagagggatctagagaggaagaaggcagactct
aaatatctagacatgctgaaattcagggaaaagcttccatcctttggaaaaaaagaggag
ttggtggagttgatcaggtccagccaggtgctggtggtcagtggagagactgggtgtggt
aagactacccaggtgacccagtttatcctggatgactacatagagaggggcatgggttca
gtctgccgggtggtctgcacccagccacgtcgcatcagtgccatatctgtagcggagcgg
gtggctgcggagagggctgagagtgtaggggacgggaactcatgtggttatcagatccgc
ctgcagagtcggttaccacggaaacagggctcggtgctgtattgtacaacgggtattatt
ctacagtggcttcgctcttcccctctgttgtccaccatcagccacctggttttggatgaa
attcatgagaggaaccttcactctgatgttctactcatcattgttaaagacctgctccga
gtccgacaggacctcaaggtcatcctcatgagtgccacgctcaacgctgagaagttctcc
aagtactttaataactgtcctatgatccacatcccggggatgaccttcccagtgcaagag
ttcctactggaggatgtgttggagatgattaggtaccgtccccagaagaaggagcagagg
cccaggtggaagagaggtttcatgcagggtcagaactccagaccagagaaggaccagaaa
gaggccgagtacaaggagagctggccctgctacgcccgcacactacgagacaagtactct
gacagaaccatagatgtgttggagatgatggacgatgatgataagattgaccttgagctc
atcgtgcagctgatcagacatatcgtgctaagccaggaagaaggagccatcttggtgttc
ctgccaggttgggacaacatcagtggcctcaatgacctcctcatggctcagcagatgttc
aaatcagatcggtttgtgatcattcctctgcactccctgatgcctactgtcacccagacc
tcggtgttcaaaaggccccctccaggagtcaggaagattgtcattgccaccaatatcgct
gagaccagtattaccatagatgatgtggtgtttgtgatagatgggggaaagattaaggag
actcactttgacactcagaacaacatcagcactatgactgcagagtgggtcagcctggcc
aatgccaaacagagaagaggacgcgctggcagggtgtgtccagggaaatgttatcacctg
tataatggcctgagggccagtcttctggatgcctaccagctacctgagatcatgcgcaca
ccactggaggaactgtgtctgcagatcaagatcctcaagctgggtccaatagcagagttc
ctgaggaaagctctggaccctcccacagaggaggctgtcactctggccatcacacatctg
atggacctcaatgctctggaccgctcagaggctctgaccccgttagggttccacctggcc
aggctgcctgtagagcctcacatcgggaagctgatcctgtttggagctctgctgggctgt
ctggatcctgtcctcactatcgctgcctctctcagcttcaaggaccccttcttcatacca
atgggtaaggagaagatggcagactttaggagaagaactctatccagagactcaaagagt
gaccacctcaccatcatctatgccttcacaggctgggaggaagctaagcgacgcggctac
aagtttgaacgagagttctgctgggacaacttcctgtcagccaatacactccagatgctg
cacaacatgaagggtcagtttgctgagcacctgctgggggctggcttcaccagcagcaag
aacccaaaagaccctgaatctaacactaactcagataatgagaagctgatcaaggcagtg
atagtggcaggtctctaccccaaagtggccatgatcaaacccagcggtagcaagaagaga
ccggtgagggtgtatactaaaactgatgggaaggtgtgtattcaccccaagtcagtgaat
gctgaggagacccagtttaactacacatggctcatctatcacctcaagatgaggaccagc
agtatcttcctgtacgactgtacggaggtgtctccgttctccctgctgttctttggaggt
gacgtcaccatacagatggatcaggaccaggagaccatcgctgtggacgactggatcgtc
ttccagtcccccgcacgcatcgctcacctcgtcaagaatctgaagaaggagctggactct
ctattggaagagaagatccgaagccccgcccctgtggactggagcaaccgccaatccaaa
gactgtgccgtcatcacagccatcatagacctcatcaccacccaggagaggcccgacgtt
aacgcgaggaacactgagcctagaggacgccgccagtatcacaacaacgatgatggtgac
gagtacgagaactgctgcatctcttctcaacccagagaaaagctcaggccatag
DBGET
integrated database retrieval system
