Oncorhynchus kisutch (coho salmon): 109908426
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Entry
109908426 CDS
T09179
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein-like isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109908426
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109908426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
WD40_CDC20-Fz
Patched
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
109908426
NCBI-ProteinID:
XP_020362655
Ensembl:
ENSOKIG00005017738
LinkDB
All DBs
Position
LG2:17792620..17821447
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AA seq
1307 aa
AA seq
DB search
MAMDSIGSSDAFKLGILGSIVRRSLDAPRRSVLAHPRTAPPDGRQLTPPPRMTVRERLRE
KISAAFYRHGLLCASYPVPIILFTSASILACCYPLLRLPLPGTGPVEFTTRVRDYTVPSH
EPQGDLGERPDWYRGPPVAYIQPVLVKAAVSPWDSTLVPVDVFRSPLGRVFSLLEEIRNH
VHNDGSGVRSLEALCLQVTDLLPGLRRMQRVLPEHGCLLVSPGNYWQNQRELFDSDPDLL
KTVHQHEPKGLHTSATLRDLLFGVPVKHTGVSLYSRKRVVTYTITMVLGSYDARFLSSLR
ARLRQLHPSVNCSLREDHMVHVHFKEEIGMAELIPLVTTYIILFAYIYFSTRKIDMVKSK
WGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLVLTKSVVSTP
VDLEVKLRIAQGLSNESWSIMKNMATELCIILIGYFTLVPAIQEFCLFAVVGLVSDFFLQ
MFFFTTVLSIDIRRMELADLNRRLPAEAGMPLPKPGPLRLREAPPPPRPSPHTITLQTPA
FRNLRLPKRLRVVYFLARTRLAQRFIMVGTVIWIGILAYTDPAGLRTYLAAQVSEQSPLG
QGGAGGLPPHLGVAPVFPGPGGAPADTLSVLPAPAEPTPLPENQSQGHHGAPGEGVPLVP
QISWGAEDEEGWRRLSFRHWPSLFSYYNITLAKRYISILPVIPITLHLSPREAIETRHPQ
DTRHPPPPSLKTNDLPTDLTLYKVAALGLAAGVLLVLLLFCLYRVLCSRNYGQNGVAHGR
RRRGDLPCDDYGYSPPISEISPLLLCGHSMDIECLASDGMLLASCCLAGQIRVWDTQTGD
CLTVIPKHGLRRSSSSGCWEQRDGWDAVGVAEPENLGGGTEPGGGVFDEDEGYPLRRRTT
PRPALFENQPDLTPLIDTNFDSQPPSHLLLTPPRDGFDFGGLVEKAYLEHEPPSPGLTAS
YPSSSPLSGPPPQRRRSLGYIQPPAPQGQETPDWESAVWAMELRGNLIAAGRSNGKLELW
DAVEGSLRCSNEDGVSGITALAFLNNRIVAARLDGSLDFFTVDINKPLGLLQYRGPPGRS
NMPPSPCYSSEDVISCQLTRSVQCAHQKPITVLRAAAGRVVTGSQDHTVRVYRLEDSCCL
FTLQGHSGGITAIYIDQTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTTSC
VISSGLDDLICIWDRSTGIKLYSIQQEVGCGASLGVISESLLVTGGQGCVSFWDLNFGDL
LQTVYLGQSSDGQGVRQLVVLNNAAIVCDFGSELSLVYVPAVLEKLD
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggacagtataggatccagtgatgccttcaaactggggattttaggaagcatc
gttaggaggtccctggatgccccgcggcgctcggtcctcgcccacccgcgcacggcgccc
cccgatggccggcagctgaccccgccccccaggatgacggtgagagagcggctgcgggag
aagatctcggcggcgttctaccgccacgggctgctgtgcgcatcctatccggtgcccatc
atcctcttcacctccgccagtatcctcgcctgctgttaccccctgctgcggctgcctctg
ccgggaaccgggccggtggaattcaccacacgggtccgagattacaccgtcccttcccat
gagccccagggagacctcggcgagcggcctgactggtatcggggtcctccggtggcctac
atccagccggtcctggtgaaggcagctgtgtctccctgggacagtacgctggtccctgtg
gacgtgttccgctccccactgggccgcgtattcagcctgctggaggagatccgcaaccat
gtacacaacgacggttctggggtcaggagcttggaggcgctctgcctgcaggtgacggac
ctgttgccggggttacggcgtatgcagagagtgctgccggagcacggttgtctgctggtc
tcccccggcaactactggcagaaccagcgggagctgtttgactctgaccccgacctgctg
aagaccgtccaccagcacgaacccaaaggactgcacacctctgccacacttagagacctg
ctgtttggcgtcccggtgaaacacacaggggtgagtctgtacagcaggaagagggtggtc
acctacacaatcaccatggtcttgggcagctacgacgccaggttcctgtctagcctgcgg
gcgcgtctccgccagctacacccctcggtgaactgcagcctacgtgaggaccacatggtg
cacgtgcacttcaaggaggagataggcatggccgagctcatccctctggtcaccacctac
atcatactgtttgcctacatctacttctccacacgtaagattgacatggtgaagtcaaaa
tggggcttggcgctggctgccgtggtaacagtgctcagctctctgcttatgtctgtgggg
ctctgcaccctgttcggcctgacgcccacactcaatggaggtgagatcttcccctatctg
gtggtggtgatagggctggagaacgtcctggttctcaccaagtctgtggtgtccacccct
gttgacctggaggtcaaactacgcatcgctcagggccttagtaatgagagctggtctatc
atgaagaacatggccacagagctgtgcatcatcctcataggatatttcaccctggtgcct
gctatccaggagttctgtctatttgctgtggtgggactggtgtctgacttcttccttcag
atgtttttcttcaccacagttctttccattgacatccgacgcatggagttggccgatctg
aaccggcgtcttccggccgaggcggggatgccccttcccaaaccgggccccctacgcctt
cgggaggcgcctcctcccccacggccctcgccccacaccatcaccctgcagacgcccgcc
ttcaggaacctgcgcctgcccaagaggctccgtgtggtctacttcctggcccgcacgcgt
ctggcccagcgcttcatcatggtgggtacagtgatctggattggcatcctggcctacacg
gaccccgctggcctccgtacctacctggcagcccaggtgtctgagcagagccccctgggg
cagggcggggccgggggtctgcccccgcacctgggagtagccccggtcttccctggacca
ggaggggcccccgccgacaccctcagtgtcctccccgcccccgctgaacccaccccgctt
ccagagaaccagtcccagggccaccacggggcccccggggaaggagtacccctggtgccc
cagattagctggggggcggaggatgaggagggctggaggaggctgtctttcagacactgg
ccctcgctcttcagctactataatattactctggccaagagatacatcagcatcctgcct
gtcatccccatcacgctccacctgagcccccgggaggccatcgagacacgtcaccctcag
gacacacgccaccccccgccgcccagcctcaaaaccaacgacctgcccacagacctcacg
ctctacaaggtagcagctctgggcctggcggcaggggttctgctggtgctgctgctcttc
tgtctctaccgggtcctctgttcccgcaactacggccagaacggcgtggcccacggacgc
cgtcgtcgcggtgacctgccctgcgacgactacgggtactcgccacccatcagcgagatc
tcccccctgctgctgtgtggacacagcatggatatagagtgtctggcgagtgacggcatg
ctgttggccagttgttgtctggcaggacagatccgtgtgtgggacactcagactggagac
tgcctcaccgtcattcctaaacatgggctgcggcggagtagcagcagtggctgctgggag
cagcgggatggttgggacgctgtgggtgtggccgaacctgaaaatcttgggggcgggaca
gaaccagggggcggggttttcgacgaggacgagggctaccctctcaggcggcggaccacc
ccacgtcctgccctctttgagaaccaacccgacctcacacccctcatcgacaccaacttc
gactcccagcccccctcccacctcctcctcaccccgcccagggatggctttgacttcggg
gggctggtggagaaggcctacctggagcacgagcctccctcgccgggcctcactgcctcc
tacccctcctcctcacccctgtcgggaccccctccccagaggagacgcagcctggggtac
atccagcctcctgctccacagggccaggaaaccccggactgggaaagcgccgtgtgggcc
atggagctccgggggaacctcatcgctgctgggaggagcaacggcaaactagagctgtgg
gacgcagtggagggctcgttacgctgcagtaatgaagacggcgtctcggggatcacggcc
ctggccttcctcaacaacaggatcgtggcggccagactcgacggctctctagacttcttc
actgtcgacatcaacaagcctctgggcttactgcagtacagaggtccccccgggcgtagt
aacatgccgccctcgccctgctacagcagtgaggatgtgatctcatgccagctgacgcgc
tcggtgcagtgtgcccatcagaaacccatcacggtgctgcgagccgctgccggcagagtg
gtcacaggcagccaggaccacactgtcagggtatatcgtctggaggactcatgctgtctc
ttcacgctccagggccactctgggggaatcactgccatctacatagatcagaccatggtt
ctggccagtggggggcaggacggagcaatctgtctgtgggatgtgctgacgggcagccgg
gtgagccacgtgtacggtcaccgtggcgacgtgacctcactggtgtgcaccacatcgtgc
gtgatcagcagcggcctcgacgacctcatctgcatctgggaccgcagcacgggcatcaag
ctctactccatacagcaggaggtgggctgcggggccagtctgggggtgatctctgagtct
ctcctggtgacagggggccagggctgtgtgtccttctgggacctgaacttcggggacctc
ctccagacggtctacctgggccagagcagcgacggccagggggtccgccagctcgtggtg
ctgaacaacgccgccatcgtctgcgactttggctccgagctcagcctggtctatgtaccc
gcggtgctggaaaagctggactga
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