KEGG   Oncorhynchus kisutch (coho salmon): 109908443
Entry
109908443         CDS       T09179                                 
Name
(RefSeq) thrombospondin-3b
  KO
K04659  thrombospondin 2/3/4/5
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04145  Phagosome
oki04510  Focal adhesion
oki04512  ECM-receptor interaction
oki04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109908443
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109908443
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109908443
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109908443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109908443
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109908443
   00536 Glycosaminoglycan binding proteins [BR:oki00536]
    109908443
Membrane trafficking [BR:oki04131]
 Endocytosis
  Phagocytosis
   Opsonins
    109908443
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109908443
  Exosomal proteins of colorectal cancer cells
   109908443
  Exosomal proteins of bladder cancer cells
   109908443
Glycosaminoglycan binding proteins [BR:oki00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109908443
SSDB
Motif
Pfam: TSP_C TSP_3 COMP EGF_CA cEGF EGF_3
Other DBs
NCBI-GeneID: 109908443
NCBI-ProteinID: XP_020362668
Ensembl: ENSOKIG00005018833
UniProt: A0A8C7MET7
LinkDB
Position
LG17:complement(29656014..29687434)
AA seq 955 aa
MDMGRLMQNVLLVSASLLLGFSRSSEMQVIDMLELHDAKQSASAVGKMSGALGFVSDLYL
VSTLRLPPKLGGVLLGVYNKDDNRKYLEVALMGKVNKVLVRYVREDGKLHTVNLQNPGLS
DGRTQSLILHVGGLRRNHLHMELYVNCRLADSAQVLPSFVQLPSEAESVEIRNGQKAYAR
LQGSVDSLKMALGGSIAKAGILTDCPFQGDTYFQNSAGADVNAILGDHTKALIGQLIIFN
QILGELREDIREQVKEMSLIRNTILECQACGFHEPHSRCEPNLCYKGVPCTETREYPGYR
CGACPEGMTGNGTHCQDIDECAVARPCFSPEGCVNTAKGFTCESCPVGFSGSLLSGVGVE
FAKSHKQECTDVDECADLSNTCVPNSVCINTEGSFRCGLCKESFVGNQTVGCFLRRSCAT
LGFNPCDVNGHCVIKGAAKVSCKCNVGWAGNGYTCGPDTDSDGYPDQPLPCIDNDYHCRA
DNCVNTPNSGQEDADGDGIGDQCDEDADGDGIQNVEDNCRLVPNKDQQNSDTDSYGDACD
NCPNVPNGSQKDTDGNGAGDTCDNDIDGDGIPNVLDNCPKMPNPMQTDRDGDGVGDACDS
CPEVNDPLQSDMDNDLVGDVCDTNQDMDGDGHQDSRDNCPDVPNSSQLDSDNDGIGDECD
DDDDNDGIPDTGPPGPDNCRLIPNPSQTDTDRNGIGDMCENDFDNDSVIDLIDVCPESAE
VTMTDFRAYQTVILDQEGEAQIDPNWIVLNRGMEIVQTMNSDPGLAIGVTAFNGVDFEGT
FHINTATDDDYVGFIFSYQDSSSFYVVMWKQMEQTYWQSLPFRAMAQPGLQLKAVKSRTG
PGEYLRNALWHTGDTPGEVTLLWKDARNVGWRDKTSYRWHLSHRPQVGYIRVRLYEGMTL
VADSGVVVDTSMRGGRLGVFCFSQEQIIWSNLGYRCNDTVPEDYEFYRKQMHIRV
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggatatggggaggcttatgcaaaatgttctacttgtgagcgcgtcgcttctcttgggc
ttcagcaggtcttcagaaatgcaagtgattgacatgctggagctgcacgacgccaagcag
agtgcgtccgcggtggggaagatgtcgggggctctgggcttcgtgtcggatttgtacctg
gtgtccactctgcgactgccgcccaaactgggaggagtgctgctgggcgtctacaacaaa
gacgacaacaggaagtacctggaggtggccctcatgggcaaggtcaacaaagttctggtg
cgctatgtacgtgaggatggtaaactccacacagtgaacctccagaaccccggcctctcc
gacggacgcacccagtcactcatcctccacgtgggtgggctccgacgaaaccacctccac
atggaactctatgttaactgccgattggccgactcagcacaggtcctgccgtcatttgtc
cagcttccatcagaggcggagtctgtggagatacgaaatgggcagaaggcctatgccagg
ctacagggctcagtggactctctgaaaatggctctgggtggctccatagccaaagcagga
atcttgaccgattgtccatttcagggtgatacatattttcaaaattcagctggtgccgat
gtcaatgccattctgggtgaccataccaaggctttgattggccagctgatcatcttcaac
cagatcctgggtgaactccgagaggacatcagggaacaggtgaaggagatgtctctgatt
aggaacaccattctggagtgccaagcgtgtggcttccacgagccccactctcgctgcgag
cccaacctctgctataagggcgttccctgtacagagacccgggagtacccaggctaccgt
tgtggtgcctgcccagaaggcatgacggggaatggcacccactgccaggacattgacgag
tgtgccgtagcccggccctgtttctcgcccgaggggtgcgtaaacacggccaagggcttc
acctgtgaatcctgtcccgtcggcttctcaggatccctcctcagtggggttggggtggag
tttgccaagagccacaagcaggagtgcacagatgtggatgagtgtgctgacctctccaac
acctgcgtccccaactcagtctgcatcaacacagagggctcgttcaggtgtggtctgtgt
aaggagagctttgtgggcaaccagacggtgggctgtttcctgcggaggtcctgcgccaca
ctgggcttcaacccctgcgacgtcaacggccactgtgtcataaagggtgctgccaaggtc
tcctgcaagtgtaatgtgggctgggcaggaaatgggtatacgtgtggtccagacacagac
agcgatggctaccccgaccagcctctcccctgcatagacaatgactatcactgtcgagct
gacaattgtgtgaacacacccaactctggccaggaagacgcagacggagacggtataggt
gaccagtgtgacgaagatgcggacggagatggaatccagaacgtggaggacaactgccgt
ctggtccccaacaaggaccaacagaactctgatacagactcatatggggatgcgtgtgac
aactgccccaatgttcccaatggcagccagaaggacaccgacggaaacggggctggagac
acctgtgacaatgacattgatggggatggtatcccaaacgtgctggacaactgtcccaag
atgcccaaccctatgcagacggaccgtgacggggatggagtgggagacgcatgtgacagc
tgcccagaagtcaacgaccccttgcagtctgacatggacaatgacctggtgggagatgtg
tgtgacaccaaccaggatatggatggggacggccaccaggactccagggacaactgtcca
gacgtccctaacagctctcagctggactcagacaacgacggcatcggcgacgaatgcgac
gatgacgacgacaacgatggcattccagatactggacctcccgggccggataactgccgg
ctcatccccaaccccagccagacagacactgacagaaatggcattggtgacatgtgcgag
aatgactttgataatgactcagtgatagacttgattgacgtgtgtccagagagcgctgag
gtcacaatgaccgacttcagagcctatcagacggtcatcctggaccaggagggcgaagcc
caaatcgaccccaactggatagtgctcaatcggggtatggaaattgttcaaaccatgaac
agcgaccctggtttggccataggcgtcacagcctttaacggggtagactttgaggggacg
ttccacatcaacacggccacggacgatgactatgtgggcttcatcttcagctaccaggac
tcgtccagcttctacgtggtcatgtggaaacagatggagcagacctactggcagtcactg
ccttttagggccatggcccagccaggcctgcaactgaaggcagttaagtcacgtacgggt
cccggtgaatacctccgcaatgccctgtggcacacgggcgacaccccgggtgaagtcaca
ctgctgtggaaggacgccaggaatgtgggctggagggacaagacatcttaccgttggcac
ctcagccaccgcccgcaggtgggctacatcagggtgaggctgtatgaaggcatgacattg
gtggcagactctggcgtggtggtggacacctcaatgaggggcgggaggctgggcgtcttc
tgcttctcccaggagcaaatcatctggtccaacctgggctatcgctgcaacgatactgta
ccagaggactatgagttctaccgcaagcagatgcacatcagggtgtga

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