Oncorhynchus kisutch (coho salmon): 109908443
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Entry
109908443 CDS
T09179
Name
(RefSeq) thrombospondin-3b
KO
K04659
thrombospondin 2/3/4/5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04145
Phagosome
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109908443
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109908443
09144 Cellular community - eukaryotes
04510 Focal adhesion
109908443
09142 Cell motility
04820 Cytoskeleton in muscle cells
109908443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109908443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109908443
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109908443
Membrane trafficking [BR:
oki04131
]
Endocytosis
Phagocytosis
Opsonins
109908443
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109908443
Exosomal proteins of colorectal cancer cells
109908443
Exosomal proteins of bladder cancer cells
109908443
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109908443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
cEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
109908443
NCBI-ProteinID:
XP_020362668
Ensembl:
ENSOKIG00005018833
UniProt:
A0A8C7MET7
LinkDB
All DBs
Position
LG17:complement(29656014..29687434)
Genome browser
AA seq
955 aa
AA seq
DB search
MDMGRLMQNVLLVSASLLLGFSRSSEMQVIDMLELHDAKQSASAVGKMSGALGFVSDLYL
VSTLRLPPKLGGVLLGVYNKDDNRKYLEVALMGKVNKVLVRYVREDGKLHTVNLQNPGLS
DGRTQSLILHVGGLRRNHLHMELYVNCRLADSAQVLPSFVQLPSEAESVEIRNGQKAYAR
LQGSVDSLKMALGGSIAKAGILTDCPFQGDTYFQNSAGADVNAILGDHTKALIGQLIIFN
QILGELREDIREQVKEMSLIRNTILECQACGFHEPHSRCEPNLCYKGVPCTETREYPGYR
CGACPEGMTGNGTHCQDIDECAVARPCFSPEGCVNTAKGFTCESCPVGFSGSLLSGVGVE
FAKSHKQECTDVDECADLSNTCVPNSVCINTEGSFRCGLCKESFVGNQTVGCFLRRSCAT
LGFNPCDVNGHCVIKGAAKVSCKCNVGWAGNGYTCGPDTDSDGYPDQPLPCIDNDYHCRA
DNCVNTPNSGQEDADGDGIGDQCDEDADGDGIQNVEDNCRLVPNKDQQNSDTDSYGDACD
NCPNVPNGSQKDTDGNGAGDTCDNDIDGDGIPNVLDNCPKMPNPMQTDRDGDGVGDACDS
CPEVNDPLQSDMDNDLVGDVCDTNQDMDGDGHQDSRDNCPDVPNSSQLDSDNDGIGDECD
DDDDNDGIPDTGPPGPDNCRLIPNPSQTDTDRNGIGDMCENDFDNDSVIDLIDVCPESAE
VTMTDFRAYQTVILDQEGEAQIDPNWIVLNRGMEIVQTMNSDPGLAIGVTAFNGVDFEGT
FHINTATDDDYVGFIFSYQDSSSFYVVMWKQMEQTYWQSLPFRAMAQPGLQLKAVKSRTG
PGEYLRNALWHTGDTPGEVTLLWKDARNVGWRDKTSYRWHLSHRPQVGYIRVRLYEGMTL
VADSGVVVDTSMRGGRLGVFCFSQEQIIWSNLGYRCNDTVPEDYEFYRKQMHIRV
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggatatggggaggcttatgcaaaatgttctacttgtgagcgcgtcgcttctcttgggc
ttcagcaggtcttcagaaatgcaagtgattgacatgctggagctgcacgacgccaagcag
agtgcgtccgcggtggggaagatgtcgggggctctgggcttcgtgtcggatttgtacctg
gtgtccactctgcgactgccgcccaaactgggaggagtgctgctgggcgtctacaacaaa
gacgacaacaggaagtacctggaggtggccctcatgggcaaggtcaacaaagttctggtg
cgctatgtacgtgaggatggtaaactccacacagtgaacctccagaaccccggcctctcc
gacggacgcacccagtcactcatcctccacgtgggtgggctccgacgaaaccacctccac
atggaactctatgttaactgccgattggccgactcagcacaggtcctgccgtcatttgtc
cagcttccatcagaggcggagtctgtggagatacgaaatgggcagaaggcctatgccagg
ctacagggctcagtggactctctgaaaatggctctgggtggctccatagccaaagcagga
atcttgaccgattgtccatttcagggtgatacatattttcaaaattcagctggtgccgat
gtcaatgccattctgggtgaccataccaaggctttgattggccagctgatcatcttcaac
cagatcctgggtgaactccgagaggacatcagggaacaggtgaaggagatgtctctgatt
aggaacaccattctggagtgccaagcgtgtggcttccacgagccccactctcgctgcgag
cccaacctctgctataagggcgttccctgtacagagacccgggagtacccaggctaccgt
tgtggtgcctgcccagaaggcatgacggggaatggcacccactgccaggacattgacgag
tgtgccgtagcccggccctgtttctcgcccgaggggtgcgtaaacacggccaagggcttc
acctgtgaatcctgtcccgtcggcttctcaggatccctcctcagtggggttggggtggag
tttgccaagagccacaagcaggagtgcacagatgtggatgagtgtgctgacctctccaac
acctgcgtccccaactcagtctgcatcaacacagagggctcgttcaggtgtggtctgtgt
aaggagagctttgtgggcaaccagacggtgggctgtttcctgcggaggtcctgcgccaca
ctgggcttcaacccctgcgacgtcaacggccactgtgtcataaagggtgctgccaaggtc
tcctgcaagtgtaatgtgggctgggcaggaaatgggtatacgtgtggtccagacacagac
agcgatggctaccccgaccagcctctcccctgcatagacaatgactatcactgtcgagct
gacaattgtgtgaacacacccaactctggccaggaagacgcagacggagacggtataggt
gaccagtgtgacgaagatgcggacggagatggaatccagaacgtggaggacaactgccgt
ctggtccccaacaaggaccaacagaactctgatacagactcatatggggatgcgtgtgac
aactgccccaatgttcccaatggcagccagaaggacaccgacggaaacggggctggagac
acctgtgacaatgacattgatggggatggtatcccaaacgtgctggacaactgtcccaag
atgcccaaccctatgcagacggaccgtgacggggatggagtgggagacgcatgtgacagc
tgcccagaagtcaacgaccccttgcagtctgacatggacaatgacctggtgggagatgtg
tgtgacaccaaccaggatatggatggggacggccaccaggactccagggacaactgtcca
gacgtccctaacagctctcagctggactcagacaacgacggcatcggcgacgaatgcgac
gatgacgacgacaacgatggcattccagatactggacctcccgggccggataactgccgg
ctcatccccaaccccagccagacagacactgacagaaatggcattggtgacatgtgcgag
aatgactttgataatgactcagtgatagacttgattgacgtgtgtccagagagcgctgag
gtcacaatgaccgacttcagagcctatcagacggtcatcctggaccaggagggcgaagcc
caaatcgaccccaactggatagtgctcaatcggggtatggaaattgttcaaaccatgaac
agcgaccctggtttggccataggcgtcacagcctttaacggggtagactttgaggggacg
ttccacatcaacacggccacggacgatgactatgtgggcttcatcttcagctaccaggac
tcgtccagcttctacgtggtcatgtggaaacagatggagcagacctactggcagtcactg
ccttttagggccatggcccagccaggcctgcaactgaaggcagttaagtcacgtacgggt
cccggtgaatacctccgcaatgccctgtggcacacgggcgacaccccgggtgaagtcaca
ctgctgtggaaggacgccaggaatgtgggctggagggacaagacatcttaccgttggcac
ctcagccaccgcccgcaggtgggctacatcagggtgaggctgtatgaaggcatgacattg
gtggcagactctggcgtggtggtggacacctcaatgaggggcgggaggctgggcgtcttc
tgcttctcccaggagcaaatcatctggtccaacctgggctatcgctgcaacgatactgta
ccagaggactatgagttctaccgcaagcagatgcacatcagggtgtga
DBGET
integrated database retrieval system