Oncorhynchus kisutch (coho salmon): 109908445
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Entry
109908445 CDS
T09179
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109908445
03029 Mitochondrial biogenesis [BR:
oki03029
]
109908445
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
109908445
Mitochondrial biogenesis [BR:
oki03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
109908445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
ANK_LRRK2
Ank_KRIT1
Herpes_UL36
Borrelia_P83
GrpE
LMBR1
Motif
Other DBs
NCBI-GeneID:
109908445
NCBI-ProteinID:
XP_020362673
Ensembl:
ENSOKIG00005021834
LinkDB
All DBs
Position
LG2:17849762..17855306
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AA seq
478 aa
AA seq
DB search
MSLVDLGKRLLEAARAGLDDDVRTLMVNGAPFTTDWLGTSPLHLAAQYGHHSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGHSNIVELLVSSGADINAKDMLKMTALHWAAQHGHREVA
ELLLKYGADVHSLSKFDKTPFDIAMDTSNTELMILLQDGMQNQVNMNPEPQFIISSAGVV
NLSDLVNTTAKSGMGNWSTGYRESVSTTSVLATLAALAEASGPMGKNAGKSEDAIAADSV
DSAIQHVVGDGGQRVITIVTDQHGNLQPAGLGQQFFVTMQGQQMVAVPAGQITEEVVEQE
PYPSPARKRRIEPAAILTRPKDKKAKSGDSSREQLQKQLQEANRKAQEYRTQLLQKEQEA
EQYRLRLEEAIEQQQNNNTSNATGSTCTGVQEAEEEVVQMEKQHETEERVVEEDKVEGEE
DVPFPEDTILVKVEEELDSGEGEQITVDDTEETEKASTKVTTTPKRGRGRGRGRGRRR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggtggacctgggaaagcggctgctggaggctgcacgggcagggctggatgat
gatgtcaggaccctcatggtcaatggagctcccttcaccactgattggctggggacttcc
ccgctccatctagctgctcagtatggacaccactccacggctgaggtgcttctccgagca
ggcgttagcagggatgcccgaaccaaagtggacaggacccccctccacatggcggccaca
gagggccactctaatatagtggagctgctagtcagtagcggagcggacatcaacgctaag
gacatgctgaagatgacagccctgcattgggcggcccagcacggtcacagagaggtggca
gagctgctgctcaaatatggagcagacgtccactccctcagcaagtttgacaagacgccc
tttgacatcgccatggataccagcaacactgagctcatgatactgttacaggatggtatg
cagaaccaagtgaacatgaaccccgagccccagttcatcatctcctctgctggggtcgtg
aacctctctgacctcgtcaacaccaccgccaagtcaggtatgggcaactggagcacaggt
tacagagaatctgtctctaccacctcagtcctggcaacactggcagccctggcagaagcc
tcaggtcccatgggtaaaaatgcaggcaaatctgaggatgcaatcgctgcagattctgtg
gattcggccattcagcatgtagtgggcgatggaggtcagagggtcatcaccatagtgacg
gaccaacacggcaacttgcagccagcgggacttgggcagcagttttttgtcactatgcag
gggcagcaaatggtggcagtcccggctggtcagatcacagaggaggttgtggaacaggag
ccttatccctctcctgcacgcaagaggagaatagagcctgcagccatcctaaccagaccc
aaagacaagaaagcgaagtcgggggacagcagtcgggagcagctccagaagcagttgcag
gaggccaaccggaaggcccaggagtaccgcacacagctcctacagaaggagcaggaggct
gagcagtaccgcctccgactagaggaggccatagagcaacaacagaacaacaataccagc
aatgctactggttctacctgcacaggtgtccaggaggcagaagaggaggtggtccaaatg
gaaaaacaacacgagaccgaggagagagttgtggaggaggacaaagtggaaggggaggag
gacgtcccatttccggaagacaccattctggttaaagtggaggaggagctggattcaggg
gagggagaacagataacagtggatgatacagaggaaacggagaaggcttcaactaaggtc
acaacaacccccaaacggggaagagggaggggacgaggacgtggaaggaggcggtag
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