Oncorhynchus kisutch (coho salmon): 109908480
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Entry
109908480 CDS
T09179
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109908480 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109908480 (exosc7)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109908480 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
109908480 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109908480
NCBI-ProteinID:
XP_020362720
Ensembl:
ENSOKIG00005023678
UniProt:
A0A8C7MI37
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Position
LG17:complement(40179360..40188481)
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AA seq
291 aa
AA seq
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MATVQVSEAEKVYILHGVRDDLRVDGRGCEDYRHMEIETDMVSNTDGSAKVTLGHTDVLV
GVKAEMGKPRPMVPDEGYLEFFVDCSANATPEFEGRGGDELGMELSNTLYKVFNNRYSVD
LKSLCISRGEHCWVLYVDVLLLQCDGNLFDAISVAIKAALFNTKIPKVHISEDEEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCVR
KVGGGSLDPESIFEMTETGKRVGKALHAPLMELLQEEESLGKKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtacaagtcagtgaggctgaaaaggtgtatattttgcatggtgtacgggat
gacttacgggttgatggacgaggatgcgaggactacagacacatggagattgagacagac
atggtgtcaaatacagatggctcagccaaagtgacactggggcatacagacgtgctagtg
ggagtcaaagctgaaatgggaaagccaaggcccatggtcccagatgaaggctacctggag
ttttttgttgattgctctgccaatgccacaccagaatttgagggtcggggtggtgatgag
ctgggcatggagttgagcaacaccctgtacaaagtgttcaacaacagatacagtgtggac
ctgaaaagcctctgcatcagccgaggggagcactgctgggtgctctatgtggacgtgctg
ctcctgcagtgtgatggaaatctttttgatgccatctctgttgcaattaaagcagctctc
ttcaatacaaaaattcccaaagtgcacatctctgaggatgaggaaggagggaaggaaata
gagctgtcagacgacccctacgactgcatgcgactcaatgtggagaacgttccctgtatc
gtgaccttgtgcaaggtgggccataggcacgtggtggacgccacgctgcaggagaaggcg
tgttcagtggccagcctgatcatctccgtcacacacaaggggacggtcacctgtgtcagg
aaggtgggggggggcagcctggacccagagagcatctttgagatgacagagacagggaaa
cgggtagggaaagccctccacgcccccctcatggagcttctgcaggaggaggagagtctg
ggaaagaagagacagaaagtgggctttcttggttag
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integrated database retrieval system