Oncorhynchus kisutch (coho salmon): 109908513
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Entry
109908513 CDS
T09179
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109908513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109908513
03036 Chromosome and associated proteins [BR:
oki03036
]
109908513
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
109908513
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
109908513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
109908513
NCBI-ProteinID:
XP_031649852
Ensembl:
ENSOKIG00005023782
LinkDB
All DBs
Position
LG17:49569929..49580343
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AA seq
820 aa
AA seq
DB search
MSAKVELDFSAKKADPTPLTDSSDSLSNDSLSKKTRPQTTTALILPAPAPAPSTQKVEIS
LGVAETGNGAIAGQVETPTLAPQVGGTCSIVHVLEWKEGMAILPSSNLKFCVSDCGTLEM
ISQGNITSAEPIVVVSGKIPDSENRPMNKTDVARPLSTVGGVAVDQERPIKTVPKTQGGT
GQQESCYPVAQRTYPEQLRREPMTDNRVGGAEKIPGGRVASLDPELLKPMKKRKRKDYLS
PSEEESELDGMDYLKTESGHNRAGTGEVKMELWTWGHYLEETKSVAAPAKLFQKTQRVPQ
CKSSFRQGMKLEGIDPQHPSMYFVLTVAEICGYRLRLHFDGYSDCHDFWVNANCPDIHPA
GWCEGTGHKLYTPKGCKEEEFSWASYLRMSKAQVAPKEVFSSPGRTDTEGDFEVGMKLEA
VDRMNPSLICVATVTDVVDDRFLVHFDNWDDTYDYWCDTSSPYIHPIGWCQERSLPLTPP
QGYPDPGRFSWPRYLDETGSTAVSAEAFKVRPAHGFQAQMKLEAVDKRSPGLIRVATVEE
VDTHRIKVHFDGWSHMYDDWMDSDHPDIHPVGWCESTGHPLKVPPGPRKPATTGQSSFSS
MPCKGISHSRSTKYSFHHRKCPTPGCDGSGHVTGRFTAHHCLSGCPLAERNQGRLKTDLS
DTEGSGAKRSILVFGQRTKKSRYHGRIGRPPKYRKIQQRTYQTMATEGMCPSLFMSALSA
HPDRTLSLCWEQHCKLLPGVQGISATQVAAWTVEEVFGFVQNLTGCEEQACVFKEEMIDG
EAFLLLKQTDIVKIMSIKLGPALKISNAILMFKSTDEGLK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaaagttgagctggatttttcagccaaaaaagcagatcctactcccctgact
gactccagtgattccctctccaatgacagcctgtcgaagaagacacgcccacagaccacc
acagcactcatcctgccagccccagcccctgctcctagtacccagaaggtggagatctct
ctgggtgttgctgagacaggtaatggagccatagctggacaggtggagacccccactcta
gccccccaggttggggggacctgtagtatcgtccatgtgctggagtggaaagaagggatg
gccatcttacccagcagcaacctaaagttctgtgtgagtgactgtggaacactggagatg
atcagccaagggaatatcaccagcgctgaaccaatagtagtggtgtctggaaaaatacct
gactccgaaaacaggccaatgaacaaaacagatgtggcgcgtcctctcagcactgtgggt
ggtgtggctgtggatcaggagaggcccatcaagactgtgcctaagacccagggagggaca
ggccaacaggagagctgttatccagtggcacagagaacctacccggagcaactacgcagg
gaacccatgactgacaatagggtgggaggtgccgagaagattcccgggggcagggtagcg
tctctggaccctgagctgctgaaacccatgaagaagaggaagaggaaggactacctgagt
ccatcggaggaagagtctgagctggatggcatggattatttgaagacagaaagcggacac
aacagagcgggtactggtgaagttaagatggagctgtggacgtggggacattatctggag
gagaccaaatcagtggcagctccagccaaactctttcaaaagactcagcgggtcccacag
tgcaaaagcagcttccgccagggaatgaagttagagggcatcgacccgcagcacccctcc
atgtactttgttctgactgtggctgagatttgtggctacaggctgcgtctccattttgac
ggctactcagactgtcatgacttctgggtaaatgccaattgccccgacatccacccggcg
ggatggtgtgagggcactggacacaaactgtacacccccaaaggctgcaaagaggaggag
ttctcctgggccagctacctgaggatgagtaaagcccaagttgcccccaaagaggtgttt
tccagccctggaagaactgatacggagggtgatttcgaggtgggcatgaagctggaggct
gtcgatcgcatgaacccctctctcatctgtgtggcgaccgtgaccgacgtggtggacgac
cgcttcctggttcactttgataactgggatgacacgtatgactactggtgtgacaccagc
agtccatacatccatcctattggctggtgccaagagaggagcctccccctcacgccacct
caaggttacccagacccgggcaggttctcctggccaaggtacctggacgagactggctct
accgcggtgtctgctgaggcctttaaagtacgtcctgctcatggcttccaggctcagatg
aagctggaggcagtagacaaaaggagccccggcctgattcgggtggccacagtggaggag
gtcgacacacaccgcattaaggtccattttgatggctggagtcatatgtatgatgattgg
atggactcggaccaccctgacatccacccggtcggctggtgtgagagtacgggtcacccg
ctaaaagtgccccccggccccaggaaacctgcaaccacaggccagtccagtttctcctcc
atgccttgcaaaggaatcagccactccagatccaccaagtacagcttccatcacaggaag
tgtccgacacccggatgtgatggctcgggtcatgtgactgggcggttcaccgcacatcac
tgtctgtcaggctgcccactggctgagcgaaaccagggcagactcaagaccgacctatca
gatacagaggggagcggagcaaagcggagcatcttagtctttggccaaaggaccaaaaag
tcccggtaccatggcaggattggccgtccccctaagtacagaaaaatccagcagagaaca
taccagacgatggccacagagggtatgtgcccgtctctgttcatgtctgctttgtcagcc
cacccggaccgaaccctgtctctgtgctgggagcaacactgcaaactgctgcctggcgtc
cagggcatcagcgctacacaggtggcagcgtggactgtggaggaggtctttggatttgtc
cagaatctgaccggttgtgaagagcaagcctgtgtcttcaaagaggaaatgattgacggg
gaggcctttctattactgaaacagacagacatcgtcaaaatcatgagcatcaagctcggt
cccgccctcaaaatctccaacgccattttaatgttcaagagtactgacgaaggcctcaag
tga
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