Oncorhynchus kisutch (coho salmon): 109908606
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Entry
109908606 CDS
T09179
Symbol
matn1
Name
(RefSeq) cartilage matrix protein isoform X1
KO
K19467
matrilin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109908606 (matn1)
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
109908606 (matn1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
cEGF
EGF_CA
EGF_3
EGF
Plasmod_Pvs28
hEGF
EGF_LRP2
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
109908606
NCBI-ProteinID:
XP_031649129
Ensembl:
ENSOKIG00005018190
LinkDB
All DBs
Position
LG17:21868368..21881336
Genome browser
AA seq
494 aa
AA seq
DB search
MIPSPPLFLLLLGLMGAHATAPVSVDLRTAAAMAAGLCNTRPTDLVFIVDSSRSVRPSEF
EQVKVFLAKVIEGLDVGPDATRVGVVNYASRVKNELSLKTHKTKAGLVKAVTKIEPLSTG
TMTGLAIQFALNVAFSEAEGARVKSPDISKVAIIVTDGRPQDNVKDVAARARDAGIELYA
IGVGRVDLNTLKQIASEQLDDHVDYVESYSVIEKLTKKFQEAFCVADLCATGDHDCQQVC
ISAPGSFKCACKEGFSLLEDGKSCSACSNAATDVVFLIDGSKSVRPENFELVKKWINQII
DKLDVSETKAHVGLVQYSSSVKQEFPLGRYNNKKDLKDAVKKMAYMERGTMTGQALRYLT
DSSFAPAGGARPGVAKVGIVFTDGRSQDYIGDAAKKAKEQGFRMYAVGVGNAVEDELRVI
ASQPTGEHYFYTADFKAMTAIAKKLQINICQEEDPCECDSVVKFQKKVEEALQALTKKLE
GVSKRIAALENKIV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgataccctctccgccattgttcctgttgctgctcggcctcatgggagcgcatgccacc
gctcccgtgtccgtggacctccgcaccgctgccgccatggcggcaggtctgtgtaacact
cgccccacagacctggtgttcatcgtggacagcagtaggagcgtgcgtccgtcagagttc
gagcaggtcaaggtgttcctggccaaggtcatcgagggactggatgttggacctgacgcc
acacgggtcggagtggtcaactatgccagccgcgtcaagaatgagctgtctctgaagacc
cataaaacaaaggcaggtctggtaaaggctgtgactaagatcgagcccctgtccactggc
accatgaccggccttgctatccagttcgccctcaacgtagctttcagcgaggctgagggc
gcccgcgtcaagtccccagacatcagcaaggtggccatcattgtgacagacggtcgtccc
caggataacgtaaaggatgtggcggcgcgtgcccgggatgcgggtatcgagctatacgcc
attggcgtagggcgtgtagacctgaatacgctgaagcagatcgccagcgagcagctggac
gatcacgtggactacgtagagagctactcagtcatcgagaaactcacaaagaagttccag
gaggctttctgtgtggcggacctgtgtgccactggagatcatgactgtcagcaggtatgc
atcagcgcaccagggtcattcaagtgtgcctgcaaggagggcttcagtctactggaggat
ggcaaaagctgcagcgcctgcagtaatgccgccacagacgtggtgttcctgatcgatggt
tctaagagtgtgcgtccagagaactttgagctggtcaagaagtggatcaaccagatcata
gacaaactggacgtctccgagaccaaggctcatgttggactggtccagtactccagctct
gtcaaacaggagttccctctgggacgttacaacaacaagaaggacctgaaggacgcagtg
aagaagatggcctacatggagagggggaccatgacaggacaggccctgcgctacctgacc
gacagcagctttgcaccagccggtggggcacggcccggggtcgccaaggtcggcattgtg
ttcaccgatggacgcagccaggactacatcggagacgccgccaagaaggccaaggagcaa
ggttttagaatgtatgctgtgggcgtgggtaatgctgtagaggatgagttgagggtgata
gcatcccagccaacaggagaacactacttctacactgcagacttcaaagccatgacagcc
atcgctaagaagctgcagatcaacatctgtcaagaggaggacccatgtgaatgtgactct
gtcgttaagttccagaaaaaagtagaagaagccttacaggcactaacaaaaaaactggag
ggcgtgtcgaagaggatcgctgcactggagaacaagattgtctga
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integrated database retrieval system
