Oncorhynchus kisutch (coho salmon): 109908646
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Entry
109908646 CDS
T09179
Name
(RefSeq) retinoic acid receptor beta-like
KO
K08528
retinoic acid receptor beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109908646
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109908646
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109908646
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
109908646
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Cornifin
Motif
Other DBs
NCBI-GeneID:
109908646
NCBI-ProteinID:
XP_031649045
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All DBs
Position
LG17:complement(24531710..24626534)
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AA seq
619 aa
AA seq
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MVIVPQLTDVNTPQLPDVNTPQLTDVNTPQLPDVNTPQLPDVNTPQLTDVNTPQLTDVNT
PQLTDVNTPQLPDVNTPQLPDVNTPQLPDVNTPQLPDVNTPQLPDVNTPQIPDVNTPQLT
DVNTPQLTDVNTPQLPDVNTPQLTDVNTPQLPDVNTPQLPDVNTPQIPDVNTPQLTDVNT
PQIPDVNTPQLTDNYYIFFIIFFCCVSVAIETQSTSSEELVPSPPSPLPPPRVYKPCFVC
QDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCNINKVTRNRCQYCRLQKCFGV
GMSKESVRNDRNKKKKESPKPELTENYELSAEQEAIIEKIRKAHQETFPSLCQLGKYTTK
SSAEQRVRLDLGLWDKFSELATKCIIKIVEFAKRVPGFTGLTIADQITLLKAACLDILIL
RICTRYTPDQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFAHQLLPMEMDDTETGLLSA
ICLISGDRQDLEEPSKVDQLQEPLLEALKIYVRKRRPSKPHMFPKALMKITDLRSISAKG
AERVISLKMEIPGSMPPLIQEMLENSEGQDGQSSTQGEDGSSPKKGTPKGGTGGKPSPLS
PDPSDSDGPTVAPEEEEDP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtcattgtgccacagctcactgatgtgaacacgccacagctccctgatgtgaacacg
ccacagctcactgatgtgaacacgccacagctccctgatgtgaacacgccacagctccct
gatgtgaacacgccacagctcactgatgtgaacacgccacagctcactgatgtgaacacg
ccacagctcactgatgtgaacacgccacagctccctgatgtgaacacgccacagctccct
gatgtgaacacgccacagctccctgatgtgaacacgccacagctccctgatgtgaacacg
ccacagctccctgatgtgaacacgccacagatccctgatgtgaacacgccacagctcact
gatgtgaacacgccacagctcactgatgtgaacacgccacagctccctgatgtgaacacg
ccacagctcactgatgtgaacacgccacagctccctgatgtgaacacgccacagctccct
gatgtgaacacgccacagatccctgatgtgaacacgccacagctcactgatgtgaacacg
ccacagatccctgatgtgaacacgccacagctcactgataactactacatcttcttcatc
atcttcttctgttgtgtctctgtagccatcgagacccagagcaccagttctgaggagctg
gtcccaagtcccccgtcccccctgcccccgccccgtgtctacaagccctgcttcgtgtgc
caggacaagtcctcggggtaccactatggtgtcagcgcctgcgagggctgcaagggtttt
ttccgtagatccatccagaagaacatggtgtacacgtgtcaccgggacaagaactgcaac
atcaacaaggtgaccaggaaccgctgtcagtactgccggctccagaagtgctttggcgtg
ggcatgtccaaagagtctgtcaggaacgaccgcaataagaagaagaaggagagtcccaag
ccagagctgacagagaactacgagctgagtgcagaacaagaggccatcatagagaagata
cgcaaggctcatcaggagacgttcccatcgctctgccagttggggaaatacaccacgaag
tcgagtgcggaacaacgcgtgaggctggacctggggctgtgggataagttcagtgagctg
gctactaagtgcattataaagatcgtggagtttgccaaacgagtacctggttttacagga
ctcaccatagctgaccagatcacgctgcttaaagctgcctgcctcgacatactgattctg
cgtatctgtacgcggtacactcctgaccaggacaccatgacgttctcagacgggctgacc
ctgaaccggacccagatgcacaacgcaggcttcggcccgctcaccgacctggtgttcacc
ttcgcccaccagctgctgcctatggagatggacgacacagagacaggcctgctcagtgcc
atctgcctcatctctggagaccggcaggacctggaggagccctctaaggtcgaccagctc
caggagcctctactggaagctctgaagatctacgtgcggaagaggaggcccagcaagcca
cacatgttccccaaggccctgatgaagatcactgacctccgcagcatcagcgccaaaggt
gcggagcgggtcatctcgctgaagatggagatccctggctccatgcctcctctgatccag
gagatgctggagaactcagagggacaagatggccagagcagcacccagggcgaggatggc
agcagccccaagaagggcacccctaaggggggtacggggggtaaaccctcccctctgtcc
cctgacccctcagacagcgatgggcccacagtggcccctgaggaggaagaggacccctag
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