Oncorhynchus kisutch (coho salmon): 109908714
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Entry
109908714 CDS
T09179
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
oki04517
IgSF CAM signaling
oki04520
Adherens junction
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109908714
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109908714
09144 Cellular community - eukaryotes
04520 Adherens junction
109908714
04530 Tight junction
109908714
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109908714
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109908714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
109908714
NCBI-ProteinID:
XP_031652244
Ensembl:
ENSOKIG00005018879
LinkDB
All DBs
Position
LG18:complement(58429744..58966605)
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AA seq
1451 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGNGTIKVHSLIEQAAMRYKKAIAKDPGYWLQVHRLEHGDGGILD
LDDTLCDVADDKDRLVAVYEEQDPHHGGDGTSASSTGTQSPDPFTAVAELNSSNMSAFQP
YQTSSEIEVTPSALRSNMPLHVRRSSDPSLAGLPLGDPHTAPEEPSRKNPTRWSTTAGFR
KHNHHHSHSHSQNTGTNSLERKDVDAYRSLPRDSAVWATQFQRETARSSLSANHPMVDRW
LDRQDQEEEEEEERVKQEERNGRIEPVGRADSCVEHSPTLSLNDMLKLVEVSNVGGPLGI
HVVPFSATDRRTLGLLVKRLERGGKAEQEGLFQENDCVVKINNGDLRNIRFEQAQNMFRQ
AMRSPVILFHVVPASMKSQYEQLSQEELSPPCPRGERGNRGSFTSSQASDPQAPQPGERG
SLLVHGGVGLDHNPQRMSSRSRPHPIPIPNIKHQNHGPLPPRVPDQRFSTSLPHSGSNNV
SSAPSPSLQRRVSANPTAGYLKKTGRRLNIQLKKGPEGLGFSITSRDVPIGGSAPIYVKN
ILARGAAIQDGRLKAGDQLQEVNGVDLNGRSQEEVVALLRITPMGGTVSLLVLRQEDSYL
PREVKSEEEDLVLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHADLGIFVKSII
NGGAACKDGRLRVNDQLIAVNGESLLGTPNQDAMEMLRLSMSTEGNKRGMIQLIVARRVA
KSNEEVPGSSRVEEQPLTDPLDDHERHISHSMFGTRESMDDQPSMPPRNVMMGPRMMGNY
QLSPTVNMPQDDTVMIEDDRPPVIPAHMSDQSSSSSHDDMGFAADNPVTWAQDVPNQNEC
SLSPDTEDPEDSFQREGFGRQSMSEKRTKQFGDNANQLEIIKTRKSKSMDLVSDEFNPHL
TPSTENMEGSSTGETIGPSLGLKKSSSLESLQTAVAEVTLNGEINLHRPRPRIIRGRGCN
ESFRAAIDKSYDRPGVIVTAMEECDLKGMETLEEDAEGSCRSGRNSISTATDLTLPPGNS
VTMEMQVNGNGNKKRVKSVRDKKKPERDKEKEKEKEREKNKAKKGLLLKGLGDMFRFGKH
RNGDKMERKGSSKSKMEDTQASEEEMLRMKLEQERIQAKTREFRERQALVAREREYAEIL
DINPNLNCTFSSNEDEEHPYAGIGSLDGSSEDSRQEPHQGPQPPQDSGPDQPDLEALYAQ
VNKPRNGHPPSADSNRLAPSNHDRIRRLRVEFQQARGEEDPDDRRRTYSFEQPWANSETY
TLTGHQSVSVESQVQRPRQDKRRDSFTQAQRQYSSLPRQPRKTPSTVSQESCDKAFPPGE
VFQTAKENPRYSSYQGSRNGYLHSGASGFNARVLLETQELLRQEQRRREQSEAKMRLPPP
QEGVPVTNTGYDDIHPAPTPTLPQDPVLTQAPIPVTATPKGPYRQDVPPSPSQLARLNRL
QGSEKGHPFYS
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacagtgtgttttgggagaaccagggtggtggttccttgtggcaatggaact
attaaagtccacagtcttatcgagcaagccgccatgagatataaaaaggctattgcgaag
gatcctggctactggctacaggtgcacaggttggagcatggggacggaggcatactggat
ctggacgacacactgtgcgatgtggccgatgacaaagacaggctggtggcagtgtatgag
gagcaggaccctcaccatggaggcgatggcaccagtgccagctcaacgggcacacagagc
cctgaccccttcactgccgtcgcagagctcaactccagcaacatgtccgccttccagccc
taccagaccagcagcgagatagaggttaccccctccgccctgcgcagcaacatgcctctc
catgttcggcgcagtagcgacccctctctggcgggccttcccctgggtgacccacataca
gcaccggaggaaccatcccgtaagaaccccacacgatggtccaccacggcaggctttcgc
aagcacaaccaccaccacagccacagccacagccaaaacactgggaccaacagcctggaa
cgcaaggatgtagatgcgtaccggagtctccctcgtgattcagcagtttgggccacccag
ttccagagagagactgcccgctcctcactcagcgccaaccaccccatggtggaccgttgg
ctggacagacaggatcaggaggaggaggaggaagaggagagggtgaagcaggaagagagg
aatgggagaatagagccggtggggagagcagactcctgtgtggaacactccccaacgtta
tctctgaatgacatgctaaagctggtagaggtgtccaatgtcggcgggcctctggggatc
cacgttgtgcctttcagtgccacggacagaaggacccttgggttgttagtgaagcgtctg
gagcgcggcggcaaggcggagcaggaaggtctgttccaggagaacgactgtgtcgtcaag
attaataacggggatctgaggaacatccgatttgaacaagcccagaacatgttcaggcag
gccatgcgttctcctgtcattctgttccatgtggtcccagcttccatgaagagccagtat
gagcagctctcccaggaggagcttagccccccatgtccgaggggggagaggggtaaccgg
ggaagcttcacctccagccaggcctcggacccccaggccccgcagcccggggaaaggggt
agtctgctggttcacgggggggtggggttggaccacaacccacagaggatgtcctccagg
tcaagaccacaccccattcccatccccaacatcaaacaccagaaccatggtcctctacca
ccgcgtgtaccagaccagcgcttctccacctcgctacctcacagcggaagcaacaacgtc
tcctcggccccctctccatccctgcagaggagagttagtgccaaccctactgcaggctac
ttaaagaaaaccggccggagactgaacatccagctgaagaaaggtcctgagggtcttgga
ttcagcatcacatcacgtgacgtccccataggaggctccgcccccatctatgtcaagaac
atcctggctcggggtgctgctatccaagatggccgcctgaaggctggcgaccagctgcaa
gaggtgaatggggtagacctgaatgggaggagtcaggaggaggtggtagctctactcagg
atcacccccatgggcggaacagtcagtctgctagtcctacgccaagaggactcctatcta
cctagagaagtgaagtcagaagaagaggacctggtgttgaccccagatggtaccagggag
ttcctgacctttgagatccctctgagtgactcggggtcggcaggtctgggggtcagcgtc
aagggaaaccgctccaaggagaaccacgccgacctgggcatctttgtcaagtccatcatc
aacggaggggccgcctgcaaggatggccgactgagagtcaacgaccagctgattgccgtc
aatggcgagtcgttgctagggacgcccaaccaggatgccatggaaatgcttcgcctgtcc
atgtcgacggagggcaacaaacgagggatgatccaactcatcgttgccaggagggttgcc
aagagcaacgaggaggttccaggaagctcgcgggtggaggagcagcctctgacagaccct
ctggacgaccatgagcgccacatctcccactccatgttcgggaccagagagtccatggac
gaccagccctccatgccgccacgcaatgtcatgatgggaccccgcatgatgggtaactac
cagctgtctccgactgtgaacatgccccaggacgacaccgtcatgatcgaagatgatagg
ccacctgtgatccccgcccacatgtctgaccaatcatcctccagctcccacgatgacatg
ggctttgctgcagataacccagtgacttgggctcaggacgtgccaaaccaaaatgagtgc
tccctcagtccggacacagaagacccagaagattcctttcagagggaggggtttggacgc
cagagcatgtcagagaaacgcaccaaacagtttggcgacaatgccaatcagcttgagatc
atcaagacgcgcaagtccaagagcatggacctagtatcagacgagtttaacccccacctc
acccccagcacagaaaacatggaaggctcttcgacaggagaaacaattggtccctctctg
ggcctgaagaagtccagctccctggagagcctccagactgccgttgccgaggttacactc
aacggggaaattaacctccacaggccacgcccacgaatcatcagggggcggggttgcaac
gagagcttccgggcagccatcgacaaatcgtacgacaggccaggagtaatcgttactgct
atggaagagtgtgacctgaaaggaatggagacattggaggaggacgccgaggggagttgt
cggtcaggccggaactccatatctacggccactgacctgaccctgccacccggcaactct
gtaaccatggagatgcaggtgaatggcaacggcaataaaaagagggtgaagagcgtgagg
gacaagaagaagcctgagagagataaagaaaaggagaaagaaaaagagagagaaaaaaac
aaagccaagaaagggttgctgctgaagggcctgggagatatgttcaggtttgggaagcac
cgcaatggagacaagatggagcgtaaggggtcgagtaaatctaagatggaggacacacag
gcgtctgaggaggagatgctacggatgaaactggagcaggagaggatccaggcgaagacg
agggagttccgtgaacgtcaagcgttggtggcgagggagagggagtacgctgagatcctg
gacatcaaccccaacctgaactgcaccttcagctccaacgaagacgaggagcacccctac
gcaggcatcggctccctggacgggtcatccgaagacagcagacaggagccccaccaaggg
ccccagcccccccaggacagcggtccagaccagcccgacctggaagccctctatgcccag
gtcaacaagcctcgcaacggacaccctccctcagctgacagcaaccgactggcgccaagt
aaccatgaccggatacgacgtctgagggttgagttccagcaggccagaggagaggaggac
cctgatgaccgacggcgcacatacagcttcgagcagccctgggctaactcggagacctat
accctgaccggacaccaatctgtttctgtggagtcacaggtgcagagaccgagacaagac
aagagacgagactcatttacacaggcccaaagacagtacagttccctgccacggcaacct
cgtaagacccccagcacagtgtcccaggagtcgtgtgacaaagccttcccgccgggcgag
gtcttccagacggccaaggagaacccccgctactccagctaccagggctccaggaacggc
tacctgcacagcggggccagtggcttcaacgcccgcgtcctgctggagacccaggagctg
ctgaggcaggagcagagacgcagggagcagtctgaggccaagatgaggctaccgccgcca
caggagggggtccctgtcaccaacaccggctacgatgacattcacccagccccgactcca
acccttccccaggatccagtcctgacccaggccccgatccctgtcacagccacacccaag
ggcccgtaccgccaggatgtgcccccctctccatctcagctggccaggctcaacaggctg
cagggctcagagaaaggacatccattttactcctga
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