Oncorhynchus kisutch (coho salmon): 109908734
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Entry
109908734 CDS
T09179
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109908734 (zeb1)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
109908734 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-met
zf-C2H2_6
Zn_SUZ12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
109908734
NCBI-ProteinID:
XP_020362982
Ensembl:
ENSOKIG00005038206
UniProt:
A0A8C7MYF9
LinkDB
All DBs
Position
LG18:56806434..56871783
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AA seq
1221 aa
AA seq
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MADGPRCKRRKQANPRRNNVTNYSNVVKTPGSDSDDEDKLHIVEEDGSLADGADCDSNVP
SEDHNGDRSDEAREECGSDGEDDGRTDALVEEMLQQGDTAVIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMTAHKAGRDQRHVTQSGGNRKFNCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCISVISAVNGRPRPSAKASQCPSPAMPASPSSTTRTQIWDKPVQE
QLPLNQIKSEPVDYEYKAMVLSPATPGGNGHGGGVLNGGAAGPLQGAVQAVMLPTMGLVS
PISINLADLQNILKVAVDGNMIRQMLENNAKAAGTGTGATGVPHQQLISAISLPIIGQDG
NATKIIINYSLDPSQTQLTAQNLKKEPQTLATMPGQPQAQPLAEVAIEPCSKAQQRLPED
LTLSRPPRSKEEKMEEENEKEEGEETTKTCLLCGDCPGGLDVLHALEHCKKASGLRINGD
KSESAIASLLSEGVGNQPKNLLSLLKAYFALNAEPTKEELSKISDSVSLPTDVVKKWFDK
MQSSQVSLGAPTPPSEEEGPLSESPGATVVSPKVRPEQDTEGPTMMQSGPAEATPAEVNG
SMRSPASPTPLNLTAGGPVPAKPSSSDSTDGPLDLSLPKPTREEAAAAATYHASVYSHQD
EPLNLTKTCTTKKELPLAGAAGHHVTSQPVSLYTASPQSANPISIMTTQLPSGTIYAITD
QGRAGMPCLRAVTTSNNQTILIPQLAYTYTTTATANSPAGTETQEKTTLQVNGIKEERQD
TSSEGVSTMEELNDSDSAPSRKKMRKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPH
ECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEALE
GSQGGIGEEVLEEEMESPVGLALGLGGEQQEQSDSRPTSSHLDSDERGSSTREDEEESEE
EGEEEDMETAAGEEVEGDPDRVLDMDDIQVVRIGDEGGDEEEEAEGEKEEDTGREEGESE
EEQGVERVVVGGEGEEEEEGVVGVEVKEEQEEVEVTGKKADTRQEEVQENREKEEVQENR
EKEEEHGGEKEQAEEQVEEELSEKEETMDTEKGLTSEDKEESGSRAAEESEVMKENKGET
NRNTVSEDKNQTPTGEKGDPN
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaatccgaggaggaataacgta
accaactacagtaatgtggtgaagacccctggctcagactcagatgatgaggacaagctt
cacatcgtggaggaggacgggagtctggcagacggggcagactgtgacagtaatgtgccc
agtgaagatcacaacggagaccgctcagatgaagcgagggaggagtgtggttcagacggg
gaggacgatggcaggacggacgctctggtggaagagatgctgcagcagggagacacagcc
gtcatttacccagaagccccggaggacgagccacgccaagggacccccgaggccagcgga
catgacgagaacggcactccggatgcgttctcccagctcctcacctgtccctactgctcc
cgcggctacaagcgttacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacacttttgcctaccgcacacagctggag
agacacatgacggcccacaaagctggtagagaccagaggcacgtgacgcagtcggggggc
aaccgcaaattcaactgcaccgaatgtgaaaaagcatttaagtacaagcaccacctgaag
gagcacctacgcatccacagcggagagaagccgtacgagtgctccaactgcaagaagcgt
ttctcccactcgggctcctacagttcccacatcagcagtaagaagtgcatcagcgtgatc
tcggcagtcaacggccgcccccggcccagcgccaaggcgtcccagtgcccgtccccagcc
atgcccgcctcgccctcctccaccacacgcacacagatctgggataaacctgtacaggag
caactacccctcaatcagatcaagagcgagccagtggactatgagtacaaggccatggtg
ttgtctccagcaacgccgggaggaaacggtcatggaggaggggtgttaaacgggggtgcc
gcgggccccctgcagggtgcggtgcaggctgtgatgctccccaccatgggtctggtttct
cccatcagcatcaacctggcagacctgcagaacatcttgaaggtggcggtggacggtaac
atgatcagacagatgttggagaacaatgccaaggcagcggggaccggcacaggggcgacg
ggtgttcctcaccagcagctcatctcagccatcagtctccccatcatcggtcaggacggc
aacgccaccaagatcatcatcaactacagcctcgatcccagccagacccagctcactgcc
cagaacctgaagaaggaacctcagactctggctacaatgccaggccagccccaggctcag
cccctggccgaggttgccatagagccctgcagcaaggcccagcagagactcccagaggac
ctgacactcagcaggccccccaggagcaaagaggagaagatggaagaggaaaacgagaag
gaggagggggaggagaccactaagacctgtctgctctgtggcgactgccccgggggtctg
gacgtgctccacgcactcgagcactgtaagaaggcctcaggcctcaggatcaatggggac
aaatcagagtcggccatcgcctcgttactgtccgagggggtcgggaaccagcccaagaac
ctcctgtccctcctcaaggcctacttcgccctaaatgctgagccaaccaaggaggagctc
agcaagatctcagattcagtcagcctgcccaccgacgtggtcaagaagtggttcgacaag
atgcagagcagtcaggtctcactaggagctccgacacctccgtctgaggaagagggaccc
ttgtctgagagtcctggggccacagttgtgtcccctaaggtaagaccagagcaggacaca
gagggtcccaccatgatgcagtccggcccagccgaggccactccggctgaggttaacggc
tccatgcggtccccagcctcccccacaccactaaacctgactgctggggggcccgtccca
gccaaaccctcctcctcggacagcactgatggccctctggacctgtcgctaccaaagccc
acccgagaggaggccgcagccgccgccacttaccacgcctctgtttactcccatcaggac
gaacccctgaacttgacgaagacttgcacaacaaagaaagaacttccgctcgccggcgcc
gctggccaccacgtgactagtcaacctgtgtccctgtacaccgccagcccacaaagtgcc
aaccccatcagtatcatgaccactcagctgcccagcgggaccatttatgccatcactgac
cagggccgtgcaggcatgccctgcctccgggcagttaccactagtaacaaccagactatc
ctcatcccacagctggcctatacctataccactacagctacagccaacagccctgcaggg
acagagacacaggagaagaccacactgcaagtcaacggcatcaaggaggagcgtcaggac
accagctcagagggcgtgtccaccatggaagagctgaacgactcagactccgccccttcc
aggaagaaaatgaggaaaacggagagtgggatgtacgcctgcgacctgtgtgacaagatc
ttccagaagagcagttctctgctccgacataaatacgaacacacaggcaagcgaccccac
gagtgcggtatctgcaggaaggccttcaaacacaagcaccacttgatagaacacatgcgt
ctccactctggggagaaaccctaccagtgcgacaagtgtggcaagcgcttctctcactcg
ggctcctactcccagcacatgaaccaccgctactcctattgcaagaaagaggcgctggaa
ggaagtcaaggaggtataggggaggaggtgctggaggaggagatggagagccctgtgggg
ttggccctgggcctcggaggggagcagcaggagcagtcagacagcaggcccacctcctcc
cacctggactctgacgagcgagggagcagcaccagggaggacgaggaggagagcgaggag
gagggggaggaggaggacatggagacagcggcaggggaggaggtggagggggatccggac
agagttctggatatggatgatatacaggtggtgcggataggagacgagggaggggacgag
gaggaagaggcggagggggagaaggaagaagacactggtcgagaggagggagagagtgag
gaagagcagggagtggagagagtagtggtcgggggtgaaggagaagaagaagaggagggg
gtagtgggggttgaagtaaaggaggagcaggaggaagtagaggttacagggaaaaaagca
gacacgaggcaagaggaggtacaggagaacagggagaaagaggaggtacaggagaacagg
gagaaagaggaggaacatggaggtgagaaggaacaggctgaggagcaggtggaggaggag
ctgtctgagaaggaagagacaatggacacagagaaaggattgacctcggaggacaaggaa
gagtcagggtcgagggcggcggaggaaagtgaggtcatgaaagagaataaaggtgaaaca
aacaggaacactgtttcagaagacaagaaccagacaccgacaggagagaaaggagatccg
aattaa
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integrated database retrieval system
