Oncorhynchus kisutch (coho salmon): 109908745
Help
Entry
109908745 CDS
T09179
Symbol
drosha
Name
(RefSeq) ribonuclease 3 isoform X2
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109908745 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109908745 (drosha)
03009 Ribosome biogenesis [BR:
oki03009
]
109908745 (drosha)
03036 Chromosome and associated proteins [BR:
oki03036
]
109908745 (drosha)
Enzymes [BR:
oki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
109908745 (drosha)
Messenger RNA biogenesis [BR:
oki03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
109908745 (drosha)
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
90S particles
RNase
109908745 (drosha)
Prokaryotic type
rRNA processing factors
109908745 (drosha)
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
109908745 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
Motif
Other DBs
NCBI-GeneID:
109908745
NCBI-ProteinID:
XP_020363000
Ensembl:
ENSOKIG00005027191
UniProt:
A0A8C7IN59
LinkDB
All DBs
Position
LG18:53682506..53830635
Genome browser
AA seq
1427 aa
AA seq
DB search
MSFHQGRGGGGCPRGRAPPGQHGSHQNYRPTNLGPPPPQPPMSPYHYDSQAQHSSSHSYG
GQGNSGGGGYITAHSDYMSYPPPVPTQGGMTASPLSQCPVRPPFPNPNTQSHPNFPPPPL
AGNTSGSSISGSPASAQSAYHYMMPSVPPPPFPHPPGMPPTMPPQSMSYHQPPYSMNYSH
PPFPPLPNFSPGNYGSHQGPSSFKPDHGGFRHSPHGGGGQQYKAEKQQQMDDRSQRSPER
GRGGRHDDHRQQKGGYAYGSRGGGGDRHKMDFPMNQRGKDRGRSPDRRRPEGGRHRSEYE
QRGRTPPTRHRSRERSRERHRHRDSRRSQSPDRHRKRPRSRSGSRERKRGRWEEERDRRS
DGPGMSRDRERSYTSARSRDTEPEVSIDRDRDREREMERGERERERERGERERERGERER
ERGERERGEREKGEGDEREEDELLKPAWIRCTHAENYYSSDPMDQVGDSTVVGTSKLRDL
YERFEEELVKRQERAQSARPKWDPPKTKLDEEPGTVLISDSIPKEECHSHSSSESDCESD
GGGSTCSSSSDSDVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAKSRRTGI
RHSIYPGEESVKECRPMNNNSGKLYHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLF
SHMPLTNIPLCRVIRFNIDYTIHFIEEMTPENYCVKGLELFSSYLFQDILELYDWNLTGP
EWDNQSPGCQKFHFMPRFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEE
LKWQKYAEECKGMIVTNPGMKPSSVRIDQLDREQFNPEVITFPIIVHFGIRPAQLSYAGD
PQYQKLWKSYVKLRHLLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGF
WKTGIRSDLCQHAMMLPVLTHHIRYHQCLKHLDDLIGYVFKERCLLQLAMTHPSHHLNFG
MNPDHARNSLSNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNER
LEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHG
PDLCRESDLRHAMANCFEALIGAVYLEGGLEESKQLFGRLLFNGEDLREVWLNYPPHPLQ
VQEPQTDRQLIETSPVLQKLTDFEDTIGVMFTHCRLLARAFTLRTVGFNHLTLGHNQRME
FLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTK
RPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQ
CCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMD
ALEKYNFPQMAHQKRFIERKYRQELKEMRRERDRQEKEGDEPEDSRK
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccatcagggtcgaggaggtggaggctgccccagaggaagagcccccccaggt
caacacggctcccaccaaaactaccggcccaccaacctaggacccccacccccccagccg
ccaatgtccccctaccactacgactcccaggcccagcacagctcctctcacagctatggt
ggccaaggaaacagtggtgggggtggttacatcactgcacactcagactacatgtcatac
ccccctccagtgcccactcaggggggtatgacggccagtcctctcagccagtgccccgta
cgcccccccttccccaaccccaacacccagagccaccccaacttcccccctcctcctctc
gccggcaacacctctggaagctccatatctgggtctccagcgtcagctcagagtgcttac
cactacatgatgccctccgtaccccctccacccttccctcacccccccggcatgcctcct
accatgcctccacagtccatgagctaccatcaacccccctactccatgaactactcccat
cctccattccctcctctgccaaactttagcccagggaactacggctcccaccagggtccc
agctccttcaagccagaccatgggggcttcaggcacagtcctcatggaggaggagggcag
cagtataaggctgagaagcaacagcaaatggacgacaggagtcagaggtcgccggagaga
ggcagagggggtcgccatgacgaccacaggcagcagaagggtggctatgcttacggcagt
cgtggtggtggtggcgacagacacaagatggacttccccatgaaccagagagggaaggac
cgaggcaggagtccggacagacgcaggccggagggagggagacatcggtcagagtacgaa
cagcgtgggaggactcctcctacccgtcaccggagtcgagaacgcagcagggagaggcat
cgccacagagacagtcggaggtctcagtcacctgaccgacacaggaagcgacctagaagt
cggtcaggcagcagagagaggaagcgtggtcgctgggaggaggagagggaccggaggtcc
gatggaccggggatgagcagagacagagagcgcagctatacctccgccaggagccgagac
acagagcctgaagtctccatagatagagacagagaccgggagagagagatggagaggggc
gagagggagagggagagggagaggggcgagagggagagggagaggggcgagagggagagg
gagagaggcgagagggagagaggcgagagggagaaaggggagggagatgagagagaggag
gatgagttgctgaagcctgcgtggatccgctgtacccatgctgagaactactactccagc
gatcccatggatcaagtgggtgattctacggtggtggggaccagtaagctgagggacctg
tacgaacgcttcgaggaagagctggtcaagagacaggagcgtgctcagtcggcccggccc
aaatgggacccccccaagaccaagctagatgaggagcccggtactgtattgatatcagat
agtatccccaaagaggagtgccacagtcacagcagcagtgagtcagactgcgagtctgac
gggggaggcagtacctgctccagcagctctgactctgacgtgtttgacgtgatcgctgag
atcaagaggaagaaggcccatccagaccgtctgcatgacgagctgtggtacaacgaccca
ggacagatgaacgatgggccgttgtgtaagtgcagtgccaagtccagacgcacagggata
cgtcacagcatctaccctggagaggagtcggtgaaggaatgtcgtccgatgaacaacaac
tctgggaagctctaccactacagaatcactgtgtctccacctactaacttcctgacagac
aggcctacggttatcgagtacgatgaccatgagtacctgttcgaaggcttctccctcttc
tcccacatgcctctcactaacattccattgtgcagagtgattcgtttcaacatagattac
accattcactttattgaagagatgacaccagagaactactgtgtgaaaggactggagctg
ttctcttcctacctattccaggatatactggagctctatgactggaacctcacaggtcca
gagtgggacaaccaatctcctggatgtcagaagttccacttcatgcctcgctttgtccgc
ttcttacctgacggtggtaaggaggtgctctccatgcaccaggttctcctctacctcctg
cggagctccaagcctctggtccctgaggaggagatagctgacatgctgcagtgggaggaa
ctgaagtggcagaagtacgcagaggagtgcaagggcatgatcgtcaccaaccctggcatg
aagcctagctctgtgcgtattgaccagctggacagagagcagttcaatccagaggtcatc
accttccccatcatcgtccacttcgggatccggcctgcccagctcagctacgctggagac
ccccagtaccagaagctgtggaagagctatgtgaaactacgccacctgctggctaacagc
cccaaggtcaagcagatagacaagcagaagctaacacagagggaggaagcccttcagaag
atccgccagaagaacaccatgcgccgggaggtgaccgtggagctcagcagccagggcttc
tggaagactggcatccgctctgacctctgtcagcatgctatgatgttgccagtgttgacc
caccacatccgctaccaccagtgtctgaagcacctggacgacctgattggctacgtcttc
aaggagcgctgtctgttacagttggccatgactcaccccagccaccacctgaactttggc
atgaacccggaccacgcccgtaactccctgtccaactgcggcatccgccagcccaagtat
ggggacagaaaggtccaccacatgtacatgaggaagaagggaatcaacaccttgatcaac
atcatgtctcgtcttggacaagatgatccctccccctccaggatcaatcacaacgagcgg
ctggagtttctcggcgatgccgttgtggagtttctcaccagtgttcatctgtactacctg
ttccccagtctggaggaaggagggctcgccacctacagaacggccattgtacagaaccag
cacctggccatgctagcaaagaaactggagttggatcgcttcatgctgtatgcccacggc
ccagacctctgtagggaatcagacctgagacatgccatggccaactgttttgaagcactc
ataggagcggtatatttggagggcggtctggaggagtctaagcagctgtttgggaggctg
cttttcaacggagaggacctccgagaagtgtggctcaactacccgccccatcctctgcag
gtgcaggagccgcagacggacaggcagctgatcgagacgtctccggtgcttcagaagctg
acagactttgaggacaccatcggtgttatgttcacacactgtcgcctgctggccagagct
ttcacactgaggaccgtgggcttcaaccacctcacactgggccacaaccagaggatggag
ttccttggagactccatcatgcagctggtggctacagagtacctcttcatccatttcccc
gaccaccacgaaggacacttaacactgttgcgtagctccttggtcaacaaccgtacccag
gccaaagttgcagaggagctgggcatgcaggagtttgcgatcactaacgacaaaactaaa
cggccagtggccctccggaccaagacccttgctgacctgctggaatctttcatcgcggcg
ctctacatcgataaggatctggagtacgttcacaccttcatgaacgtctgcttcttccct
cgactgaaggagtttatcctaaaccaggattggaacgatcctaaatcccagctccaacag
tgctgcctgaccctgcgcacggagggcaaggagcccgacatacccctctacaagaccctg
cagacagtggggccgtctcacgcgcgaacctacactgtggctgtgtacttcaaaggagag
aggataggctgtggcaagggcccaagtatccaacaggcggagatgggagctgctatggac
gcactcgagaaatataacttccctcagatggctcatcagaagcgcttcatcgagcggaaa
taccgacaggagctgaaagagatgagacgagagagggatcgccaggagaaggagggagac
gagccagaggacagcaggaagtaa
DBGET
integrated database retrieval system
