Oncorhynchus kisutch (coho salmon): 109908761
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Entry
109908761 CDS
T09179
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109908761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109908761
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109908761
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
HECT type E3
109908761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
109908761
NCBI-ProteinID:
XP_020363030
Ensembl:
ENSOKIG00005022930
LinkDB
All DBs
Position
LG18:51625650..51664319
Genome browser
AA seq
1089 aa
AA seq
DB search
MSFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREDERRRLKNAIIIQSYIRGY
HDRKQQYAIQRGNFDRCVCQAQSEGGPPISDAASLSLLTRQLLFFYRQSEDSQRLIWICQ
NLVKFNGQFVKLLAGPERQTCVFQIKRVLGFCCRLLQTCKDDSLNVAVPMRMLEIYSSER
TYLPVLQDVNCVASLIEQILHYMVQKGYYRSLYILVNHKLPSSLEYSDAPSGVHAIPLAG
TLLEHTLKPLHFTYSSCTTGARQFVFAAFTEEFISAPFTEQIFHFFIPALSDPRLHFPFE
AFLGSLQATVVSSAAAQKQAPWLFYFVLSAGETCLGSLSEEGLQLYLRALQTLLPLLPVS
ESTSRPEVISDSEDEEDTDIQAPSTQHDGYRISVQLITEECVHKLDTKQQTNALLNLVWR
DSASEEVFTMMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWHLIQSMTTKMITGS
MVPLLQVISRGSPMSLEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGYPMEGHGHSNTSM
MPFTLSELVTLSRLLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNTEVQQRIQAE
QKRWVQLFKVITNLVKMVKARDIRRPFCPAGHWLAEEVNIRADKVTQLYVPSARHVWRTR
RMGRIGPLQSTLDVGMEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQ
GDGPFLDGINVTIRRNYIYEDAYDKLSPENEADLKKRIRVHLLNAHGLDEAGIDGGGIFR
EFLNELLKSGFNPNQGFFKTTNEGLLYPSPTAQMLVGDSFARHYYFLGRILGKALYENML
VELPFASFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEDDVEDLGLNFTIVNNDL
GEAQVVELKPGGKDIPVSTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRM
FDQQEIQVLISGAHVPICLDDLKTFTNYSGGYTATHPVITIFWEVVESFTDEEKRKLLKF
VTSCSRPPLLGFKELYPAFCIHNGGNDLERLPTASTCMNLLKLPEFCDQHLMRNKLLYAI
ESSAGFELS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcagttttgagggagatttcaaaacaagacccaaggtgtctcttgggggagcg
agtaaaaaggaggaaaaagcatctctcctacaccggacacaagaggaaaggagaaaaaga
gaggacgaaagacgaagattgaagaatgcaattatcattcaatcctatatacgaggatac
catgaccgaaaacagcaatatgccatccagaggggcaactttgaccgctgtgtctgtcag
gcacagtcagaaggtgggccgccaatctccgacgctgccagtcttagtctcttaacaagg
caactgctatttttctacagacagagtgaggactctcagagattgatatggatttgtcag
aacctagtgaaattcaatgggcagtttgtgaagcttctggcggggcccgaaagacagacg
tgtgtgtttcagatcaagagggtcctgggcttctgctgcagacttctgcaaacctgcaag
gatgacagtttgaatgttgccgttcccatgaggatgctggagatctattcctcagagaga
acctatctccctgtccttcaagacgttaattgtgtggcatcgttaatcgagcagattttg
cactatatggtacagaaaggatactacaggtcgctttatattctagtgaatcacaagctc
ccttccagtctggagtacagtgatgctccctctggagtgcacgcgatccccttggcaggc
acactgctggagcacacgctgaagcccctgcactttacctattcctcctgcacaacaggc
gcaaggcagtttgtgtttgcagccttcacggaggagttcatctcggcgccgttcacggag
cagatctttcacttctttattccggcgctgtctgacccgcgcctccacttcccctttgag
gccttcctgggctccctgcaggccactgtagtctcctccgcagcggcgcagaaacaggcg
ccgtggctcttctactttgtcctctcagccggggagacgtgcctgggttccctatcagag
gagggcctccagctatacctgcgtgctctgcagaccctcctacctctccttcccgtgtca
gagagcaccagcaggccggaggtcatcagtgactctgaggacgaggaggacactgacatc
caggctccgtccacacagcacgacggttatcggatatcggtgcagctgatcacggaggag
tgcgtccacaagctggacaccaagcagcagaccaacgcgctgctcaacctggtgtggagg
gactctgccagcgaagaggtcttcaccatgatggcctccatttgccacacgctcatggtg
cagcaccgcatgatggtgcctaaagtcaggcttctgtacagtttagcgttcaacgcacgt
ttcctgagacatctctggcacctgatacagtccatgactaccaaaatgattacagggtcc
atggttccgctgctgcaggtcatctcccgggggtctcccatgtctctggaagactccaat
cgcatcattcccctcttctatctcttcagttccctcttcagtcactcgctcatctctgtg
cacgacagcgagttctttggctaccccatggaaggtcatggccacagcaatacgtccatg
atgccgttcacattgtccgagctggtcaccctgtctcggttactaagagatgcttgtctg
ggcattatcaagctggcctacccagagaccaagacggagcaccgcgaggagtacatggcc
gccttccgcagcgtgggggtcaagacaaacacagaggtgcagcagcgcatccaggccgag
cagaaacgttgggtccagctcttcaaggtcatcactaacttggtaaagatggtgaaggct
cgtgacatcagacgaccattctgtccagcaggccattggcttgctgaagaggtcaacatc
cgagcagataaggtgacccagttgtacgtcccgtcagccagacacgtgtggaggacgcgg
cggatgggacgcatcgggcccctgcagtccacactggatgttgggatggagcctccacag
ctgtctgtgtctgaggagagacacttggctatcctgactgagctgcccttcgtcgtgccc
tttgaggagcgagtcaagatcttccagagactgatatacgcggacaagcgggacgtccag
ggagacgggccgtttctggacgggatcaacgtcaccatcagacggaactacatctacgag
gacgcctacgacaagctctccccagaaaacgaggcggacctgaagaaacgtatccgggtg
cacctgctcaacgcccacggcctggacgaggcgggcatcgatggagggggcatcttccgt
gaattcctcaacgagctgctcaagtcgggcttcaaccccaaccaggggttcttcaagacc
accaacgagggccttctctaccccagccccaccgcccagatgctggtgggagactccttc
gccagacactactacttcctgggacggatactggggaaggccctgtatgagaacatgctg
gtggagctgccatttgccagtttcttcctgtccaagctgctgggaaccagtgcagacgtg
gacatccaccacctggcctcgctggaccccgagatgtaccgcaacctgctcttcctcaag
agctacgaggacgacgtggaggacctgggactcaacttcaccattgtcaacaacgacctg
ggagaggcacaggtggttgagctgaagccgggagggaaggacatccctgtgtccacggcc
aacaggatagcatacatccatttagtggctgattaccgactcaacaaacagatcaggccc
cactgcctggccttcagacagggcctggccaacgtggtaaacctggagtggctgcgcatg
tttgaccagcaggagatccaggttttgatatctggagctcatgtgcccatttgccttgac
gacctgaagacgtttacaaactactcaggtggttacactgccacccaccctgtcattacc
atcttctgggaggtggtagagagcttcaccgatgaagagaaacgcaagctgctcaagttt
gtcaccagttgctcgcggcctcctctcctgggcttcaaggaactgtacccagctttctgc
atccataacggggggaatgacctagagcgcctgcccacagcttccacctgcatgaacctg
cttaagctgcccgagttctgtgaccagcacctgatgaggaacaagcttctgtacgccatt
gagtcctccgcaggctttgagctcagctga
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