Oncorhynchus kisutch (coho salmon): 109908804
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Entry
109908804 CDS
T09179
Name
(RefSeq) transcriptional repressor NF-X1
KO
K12236
transcriptional repressor NF-X1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109908804
04121 Ubiquitin system [BR:
oki04121
]
109908804
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109908804
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
109908804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
CTD
Motif
Other DBs
NCBI-GeneID:
109908804
NCBI-ProteinID:
XP_020363096
Ensembl:
ENSOKIG00005041130
UniProt:
A0A8C7N3K1
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All DBs
Position
LG18:complement(48042412..48074324)
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AA seq
1121 aa
AA seq
DB search
MAECSVTDSLDLNPDGPSSRQKQNQHQSRRGRARVDHNRTWSSPNNYVPLPQQQQDHFHH
GVKSSHDNVLVNFHAPPHHREDVQRGRGRGGNGSCGGGGRGSRGRNPRWNRPGVEIGTGP
LGLPGGHHGLVGGGYRPGTLHMERGPPIDGPSWRRDPGGRGGEVGPAHEDHQDTRPKKPR
RFSQEPRRGERRSKGPPHSLDKQENQENHATGGGGGGWDPVEPREETRSLEIGTRNRKGS
RTEDRNPHVDPRKKFQEPKRSQGPIKEYPQERKEPERGASGRDILPAHHDKLGPSTEEEP
NWRGQGKCTPLQDRGQRRTPKYDYRPGQKRGDNMPNNSKESQTGCLIEQLSEEKYECMVC
CEVIRVMAPVWSCLSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQPPNTYK
CFCGKVTNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPHCPAFVTKACICG
RTSQPMRCGQATAIHCDKQCDLILNCTEHTCTQACHSGLCQPCQLQVQQVCFCGVVYREV
LCGTDKDCFDGSGHFSCQKACGKMLDCEAHRCKQVCHRGPCQPCPRSPRLVRNCPCGQTA
LAKLLELGYPERRSCSDPIPSCGKTCNKPLPCGSNETIHICEKLCHEGCCGPCTLTSTIK
CRCGSKINDVPCATIQNEDGLIFTCEKRCLKKRSCGRHKCGELCCVGVEHTCSLVCGYKL
NCGLHRCQELCHRGNCQPCWQTSFDELACHCGGTVLFPPIACGTKPLECKNLCTRRHKCD
HQVFHNCHSEEKCPPCTYLTQKWCMGKHEQRSNIPCHLQDISCGLTCNKVLLCDLHLCRR
ICHRGECLAKGACRQPCVLPRADCGHPCNAPCHRGTSCPRNTCAAKVALQCDCGRRKETV
VCTEAASAHQRYAAIAMASKLSDMQLGDSVDIGLITKKEMKQAKLECDEGCAALERNRRL
AVALQSYPSVDPFNIRTSSSTYSDSLRGDARKDLKFVSEVEEEIKNLVELASKGKLSKRS
HCFPPMNREHRKIVHELAEVYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLIERDT
GVSRAPPPIAHIKQHSKTDGVSSWSKAVKEEPAIDYFDVQD
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgctcagtcacagactctctggatttgaatccagatgggccttcatcacga
cagaaacaaaaccaacaccagtccaggaggggccgagccagagtggaccacaaccgtacc
tggagtagtcctaataattatgtcccactgccgcagcagcagcaagaccattttcaccat
ggggtcaaatcatctcatgacaatgtcctagtaaacttccatgctcctccccaccacaga
gaggatgtacagaggggtcgaggaagagggggtaatggaagttgtgggggaggtggccgg
ggctcaaggggccggaatccgaggtggaataggcctggggttgaaattggcactgggccc
cttggcttacctgggggtcaccatggactggttggtggaggctacaggcctggaacactc
cacatggagaggggaccccccattgacgggcctagctggcgtcgagaccctgggggccgg
gggggagaggtggggcctgcccacgaagaccaccaggacacccggcctaaaaagccccgg
cggttcagccaggagccacggagaggagagaggagatctaaaggacctcctcactctctg
gacaagcaggagaaccaggaaaaccatgctacaggaggagggggaggaggctgggatccg
gttgagcccagagaagaaacccgatcattagaaattggaaccagaaaccgtaaaggcagt
aggaccgaggacaggaacccccatgttgaccctcgaaagaaattccaagagccaaagcga
agccaggggccgatcaaagaatatccccaggagaggaaggagcctgaaaggggagccagc
ggcagagacatcctccctgcccatcatgacaaactgggccccagcactgaagaagagccc
aactggaggggtcaggggaaatgcacccccctgcaggacagaggccagaggagaacaccc
aaatatgactacaggcctgggcagaagaggggggacaacatgcccaacaatagcaaggag
tcacagacaggttgcctgattgagcagctgtctgaggagaagtatgagtgcatggtgtgc
tgtgaggtgatcagggtgatggcacctgtctggagctgtctcagctgcttccatgtcttc
catctaaactgcatcaagaagtgggcccgctccccagcctcacaggcagacgaaacaaat
gatgggtggaggtgtccagcttgtcagaatgttgtcttccaacccccaaacacctacaag
tgcttctgtggcaaagtgaccaacccggagttccagcgtagcgagatcccacacagctgt
ggagatatgtgtgggaagaaaaggagcggcgcagactgcaagcacccctgtaacattttg
tgtcaccccgggccttgtccacattgtcctgcctttgtcaccaaagcctgcatctgtgga
agaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgacaagcagtgt
gacttgatcctcaactgtaccgaacacacctgtacccaggcgtgccacagcggactgtgc
cagccgtgccaactacaggtccagcaggtgtgcttctgtggcgttgtctatcgggaggtg
ctgtgtgggacggataaagactgctttgacggctcaggacacttctcctgtcagaaagca
tgtggcaagatgttggactgtgaggcccaccgatgcaagcaggtgtgccaccgtgggccg
tgccagccgtgcccacgctcccccaggctggtgaggaattgcccctgtgggcagacggcc
ttggccaagctcctggagctgggctaccctgagcgccgcagctgctctgaccccatccct
tcctgtggcaagacctgcaacaagcccctgccctgtggatccaacgagacaatccacatc
tgtgagaagctgtgccacgagggctgctgtggcccctgcacactcacctccaccatcaaa
tgcagatgtggttcgaagatcaatgatgttccctgtgcaaccatccagaatgaagatgga
ctgatttttacctgtgagaagcgctgcctcaagaagcgctcctgtggccgacacaaatgt
ggcgagctgtgctgtgtgggtgtggaacacacatgctcgctggtctgtggctacaagctc
aactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgccaaccctgctgg
caaaccagttttgatgagctggcttgccactgtggggggactgtcctgttccccccaatc
gcctgtggcaccaagcccttagagtgtaagaacctgtgtaccaggaggcacaagtgtgac
caccaagtgttccataattgccacagtgaggagaagtgcccaccctgtacttacctcact
cagaagtggtgcatgggaaagcatgagcaaaggagcaacattccgtgccacctgcaggac
atctcctgtggtctgacctgcaacaaggtgctgctgtgtgacctccacctctgccgccgc
atctgccaccggggagaatgtcttgccaagggcgcctgccgccagccctgtgtgctgccc
cgtgccgactgtggccacccctgcaacgccccttgccacaggggcaccagttgcccacgc
aacacctgcgctgccaaggtggcgctacagtgtgactgcggccggagaaaggaaacggta
gtgtgcacggaggcagccagtgcccatcagaggtatgcagccattgccatggccagtaag
ctgtctgacatgcagctgggtgactcggtagacatcggtctcatcactaagaaggagatg
aaacaggccaagttggagtgtgacgaagggtgtgctgcactggaaaggaacaggcgattg
gctgtggccctgcagagttacccttcagtggaccccttcaacatccgcacctcctcctcc
acttatagtgacagcctccgaggagatgccagaaaagatttgaagtttgtcagcgaggtt
gaagaggagatcaagaatctggttgagttggccagcaagggtaaactgtccaagaggagc
cactgcttccccccaatgaacagagagcacaggaagatagtccacgagctggctgaggtc
tacaacgtagagagcgtgagctacgacagcgagcccaaacgcaacgtggttatcaccgcc
atcagggggaagtctgcctgtcctaactcaacactgacgtccctgatagagagagataca
ggggtctcaagggctcccccacccattgcccatatcaaacaacatagcaagactgatggt
gtgagcagctggtccaaggcagtcaaagaagagccggcaatcgactacttcgatgtccag
gattaa
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integrated database retrieval system