Oncorhynchus kisutch (coho salmon): 109908815
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Entry
109908815 CDS
T09179
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109908815
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
LRR_14
LRR_8
PDZ_6
LRR_4
PDZ_2
LRR_9
LRR_LRWD1
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
109908815
NCBI-ProteinID:
XP_031652043
Ensembl:
ENSOKIG00005038303
LinkDB
All DBs
Position
LG18:complement(47528565..47654177)
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AA seq
1976 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSKL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEHLD
LGSNELDVLPDTLGALPNLRELWLDRNQLSSLPLELGNLQRLVCLDVSENRLEELPSELS
GLLALTDLLLSHNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLGDVPDELGGCASLNVLSLRDNRVAKLPAELADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDESTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWIDSNLNRVSVIQFQEETTKQDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEEKRNEAYISCPDGEPESPGTEEKRLSNLSNQSHDSAASNSTASANSHEERRC
VITTARESLVGGCVEQEEEELDEMEVEYVEPTVHFAEEPIYQGGNEDCEDEEGGDGVPCS
DLEEQRPQFPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDAHLAQHPTSHH
PDPEKEEEEECMVTPQRHNRIEEPKQEERSLLHVNSSLQSVKGVSFDQVNNLLIEPARIE
EEEHTLTILRQTGGLGISIAGGQGSTPYKGADEGIFISRVSEEGPAAQAGVKVGDKLLEV
NGVVLQGAEHHTAVEALRSSGAAVSMSVLREHMVEPENAITTTPLRPEDDYFPRERRASG
LPFCIEAGSPAGFRHRLSACLVRNDKGLGFSIAGGKGSTAYRTGDMGIYISRIAEGGAAH
RDCTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGTPGGSPGLTR
ARAHSPPPPEPSDSPDQEEGNDDSSLLPHGNHLSQPLEDEYPIEEVALVKAGGHLGLSIV
GGSDHASHPFGINEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQEAVKALL
SNKQEIRMLVRRDPSPPGMEEIVIQKQPGEKLGISIRGGAKGHAGNPFDATDEGIFISKV
SSSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRILRAVGDTLVMLVCDGFDPGNAAS
VEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMVRETSQWEREEMEK
VERMRLEREEDTRLLEEETENLGTGPLKLDYRTLAALPTTALQKVNRLSPSVSATAPMEA
PIQAQCSFTLEPLGFDLGQPPTSLFPLPHALPQSGPIMNTEARPLYMSQHSPSPLITASN
QGAARQEALPTGEDEEVVVLVDSQPINFTENPFLVANRRGKGCPTSERILSGPPVGYGSA
GKLQPWLFSKAPSTEPPRTDSPIRDAPYSPTTQPASINFTPTALPAKEEISPLSPYETRP
GAIQPLSRSGGRPITSPATPDGHSSPNPFQHGPSPINSQTFDLFGERNNVHHNQPSPEPE
LNNEVFEDEGDGGMGMGQAAPVSPRPSLSSDCLDNMSLAAVPRLYRASMDMVVKTPSPGG
RDDLAQRSFRDRQKYFEIDMKQQTPDTKPKGRVSLVGADDLKKMREEEERRFEQRAREYL
MDEDDEEEDDLVKQMGVLKATGKVVLDGVEYKVEPVATPRRHCNTPPSYSATLPSYCGSS
GPSSVDGKGDYQRNSSEESFKLEQQRPNSMTGLIPVYPGESGAPIRTAKAERRQQERLRM
QSPELAPAGDKDLSPSEKRALEAEKRAMWRAARMKSLEQDALKAQMVIAKSREGKKRGTL
DQLAESPSPALTPSPTPLEDFSPQGVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSPD
VVDDIQFIDDGSSNPVHAADPRTEVPTATSALEMALYSNTRQLRQGCRSLETAVPT
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgttgtaaccgccacgtcgagtcggtggacaagcga
cattgtaatttgcaaaatgtccccgacgagatatttcgctacagccgcagtctggaggag
cttctcctcgacgctaaccaactccgagaactacccaagcctttcttcagacttctgaac
ttgcggaaactgggtctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagctcgacatctccagaaacgacattcctgagatccctgagagc
attaagttctgcaaggcattggagattgcagacttcagtggaaaccccctttccaaattg
cctgatggtttcactcagctcagagggctcgcccacctggcacttaatgacgtgtcattg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcactctctttcctggtgaaactggagcatctggac
ctgggcagcaatgaactggatgtgttgccggacacacttggtgctctccctaacctacgg
gagctgtggttggaccgcaaccagctctcctctttgccactagagctggggaacctgcag
agactcgtgtgtctagatgtgtcagagaaccgactggaggagttgccctcagagctcagc
ggcctgctggccctcactgacctgctgctctcacacaacctcctggaggtggtccccgac
agcataggctctctgaagcagctgtccatcctgaaagtggaccagaaccgactgacccac
ctgagtgactccataggagagtgtgagaacctgacggaactcgtactgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagttgaagaagctgaccaacttgaatgtggac
cgcaaccggctgggcgacgtgcctgatgagctgggtggttgcgccagcctcaacgtgctc
tccctcagagacaatcgcgtggccaaattgcccgctgagctggctgacgccactgagctt
catgttctggatgtggcagggaacaggttacagaacctgccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaggacgacgagagcaccggggagaaggtgctcacctgctacctgttgccccagcagccc
tcccccagcctggagaacctgctgcagaacagtgtggacgacagctggatagacagcaac
ctgaaccgggtatccgttatccagttccaggaggagaccaccaagcaggatgaggacgat
gaggcggctgcagagcgcaggggtctccagcgccgggcgacgccccaccccagtgagctg
aaggtcatgaagaaggtgattgaggagaagaggaacgaggcctacatatcctgtcctgat
ggagagccagagtctcctggtactgaggagaaacgactgagcaatctgtccaatcagagc
cacgactctgcggcgtccaacagcacagcctctgccaactctcacgaggagagacggtgc
gtgattaccacagcgagggagagtctagtgggtgggtgtgtggaacaggaggaggaggag
ctagacgagatggaggtggagtatgtggagcccacggtgcactttgcagaggagcccata
taccagggtgggaatgaggactgtgaggacgaggagggtggggacggggtcccatgcagc
gacctagaggaacagaggccccagttccctacggagaagcagcgtctgatcaggaaggac
acgccgcactacaagaagcacttcaagattaccaagctgccaaaacccgaggcggtggcc
gcgttactgcagggcttcagccccgacgcacacctggcccaacaccccacctcgcaccac
cctgaccccgagaaggaggaagaggaggagtgtatggttactccacagcgccacaacaga
atagaagagccaaagcaggaggagaggagtctgcttcatgtcaactcttccctgcagtcg
gtcaagggggtgtcatttgatcaagtcaataatctcctgattgagcctgctcgaattgag
gaggaagagcacaccctgaccattctacgtcaaactgggggcctgggcatcagcatagcc
ggaggacagggatccacaccctacaagggggctgatgagggaattttcatctccagggtg
tctgaagagggccctgcagcgcaggctggggtcaaagtgggagacaaactcctagaggtg
aacggtgtggttctccagggggcagagcaccacacggcggtagaggcgctgcgcagctcg
ggcgccgccgtctccatgagcgtcctccgggagcacatggtggagccggagaacgccatc
accaccacaccgctaaggcccgaggacgactacttcccccgggagagacgggccagtggc
cttcccttctgcattgaggcaggctcccccgcaggcttccgacacaggctgtctgcctgc
ctggtccgcaatgacaagggtctgggcttcagcattgccgggggtaaaggctccacagcc
taccgcacgggggacatggggatctacatctcgcggatcgcagagggaggggcggcccac
agagactgcacactccgagtaggggacagggtcatcaccatcaatggcgtagacatgacc
gaggccaggcatgaccaggcagtagcgctgcttaccggcacctctcccaccattgctctt
ctggtggagcgtgaccaggccgagccgggcaccccagggggctccccgggcctgacccgt
gcccgcgcccactcccccccacctccagagccctctgactcacccgaccaggaagagggc
aacgacgactccagcctcttgccccacgggaaccacctgagccagccgctggaggacgaa
taccccattgaggaagtggcgttggtgaaagcgggcggccacctgggactgagcatcgtg
ggaggcagtgatcacgccagtcacccgttcggcatcaacgagcctggcgtcttcatctct
aaggtgatcccccatggcttggcgtgtcagagtgggctgcgggtgggggacaggatactg
gaggtgaacaccatcgacctgcgccacgccacccaccaggaggctgttaaagccctgctc
tccaacaagcaggagatccgcatgctggtgcgcagggacccctcgcctcccgggatggag
gagatagtgatccagaagcagcctggagaaaagctgggcatcagcatccgcggcggtgcc
aagggccacgctggcaaccccttcgacgccaccgatgagggcattttcatatccaaggtg
agctccagcggtgcggcggccagggatggccgtctgcttgtgggcatgcggatcttggag
gtgagtaaccacagcctgctgggtatgacccacacggaggctgtacgcattctccgcgcc
gtgggagacaccctggtcatgctggtgtgtgacggcttcgaccctggcaacgctgcctct
gtagaggcgtcaccgggcatcattgccaacccgtttgccgcaggcatcgtgcgtaagaac
agcatggagagcatctcctctatagaccgagacctgagtcccgaggagatggacatccta
cagaaggaggtggagatggtgcgagagacgtcccagtgggagagagaagagatggagaag
gtggagcgcatgcgcttggagcgtgaggaggatactcgcctgctagaagaggagaccgag
aacctgggcactgggcctctgaaactggactaccggacgctggccgcactgcccaccacc
gctctccagaaggtcaacaggttatctccttctgtcagtgcaactgcccccatggaggcc
cccattcaggcccaatgttctttcaccttagagcccctgggttttgacctggggcagccc
cccacctccctcttccctcttccccatgctctacctcagtctggccccattatgaacaca
gaggctaggcccctctacatgtcccagcactctcccagtcccttgataaccgcctccaat
caaggagcagctagacaagaagctctgcctactggtgaagacgaggaggtggtggttctg
gtggactcccagccaatcaacttcaccgagaaccccttcctggtggccaatcgcaggggc
aaagggtgccccacctctgagcgcatcctctcagggcctcctgtgggctacgggagtgcg
ggcaaactgcagccctggttattcagcaaggcgccctccactgagccccccaggacagac
agtcccattagagacgccccctactcaccaaccacacaaccggcaagcattaatttcaca
cctactgcactgcctgccaaggaggaaatctcaccactgagtccctatgagacaaggcca
ggtgccatccagcccctctcccgtagtggcgggcggccgatcacctcgccagccactccg
gacgggcacagcagccccaatcccttccagcatggcccctcccccatcaactctcagacc
tttgatctgtttggcgagaggaacaacgtccaccacaatcagccttctccagagcctgag
ctgaacaacgaggtgtttgaggatgagggggacgggggaatgggtatgggtcaggcagcc
cccgtctctccccgaccctccctctcctctgactgtctggacaatatgagtctggcagca
gtgccacgcctctacagagcctccatggacatggttgtaaagactccatcacctggtggc
agagacgacctggcgcagcgctccttcagggacagacagaagtactttgaaatcgacatg
aagcagcagacgcccgacaccaagcccaaaggccgcgtgtccctggttggagcagacgac
ctgaagaagatgagggaggaggaagagaggagattcgagcagcgggcacgggagtacctg
atggatgaagatgacgaggaggaggatgacctggtgaagcagatgggagtgttgaaggcc
acgggcaaagtggtgctggacggggtggagtacaaggtggagcctgtagccaccccccgc
aggcactgtaacacgccccccagctacagcgccacactccctagctactgtggcagctca
gggccctcgtcagtggatggtaaaggagactaccagaggaattcctcagaggagagcttc
aagctggagcagcagaggcccaactccatgactggtctgatcccagtgtaccctggagag
tcgggggctcccatccggacagccaaggcagaacggaggcaacaggagcggctgaggatg
cagagtccagagctggcaccagctggagacaaggacctctccccctccgagaaacgagct
ctggaagccgagaagagagccatgtggagggcagcaaggatgaagtctctggagcaggat
gctttgaaggctcagatggtcatcgctaagtccagggagggaaagaagcgtggcacactg
gaccagctggccgagtcgccctcgcccgccctcacgccatcccccacccctctggaagat
ttcagtccacaaggagtaacgtcaccaggcagactgtccctgtcagaaaagaagtttgac
taccgacagtttgctgccattccttcttccaaacccgtatacgacatccagtctcctgac
gtggtcgatgacattcaattcattgacgatggctccagtaacccagtgcatgctgcggat
cccaggactgaggtgcccactgccacctcagcactggagatggccctctacagcaacacg
cgccagctgaggcagggctgccgcagcctggagaccgccgtgcccacataa
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