Oncorhynchus kisutch (coho salmon): 109908905
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Entry
109908905 CDS
T09179
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109908905
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
109908905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
EGF_Teneurin
GerE
Motif
Other DBs
NCBI-GeneID:
109908905
NCBI-ProteinID:
XP_020363277
Ensembl:
ENSOKIG00005047243
LinkDB
All DBs
Position
LG18:complement(40379716..40452334)
Genome browser
AA seq
2192 aa
AA seq
DB search
MSSRRYANLFVLGVAFIFFLTFSKLYGTLVRRSTHKRAHETQRRTASRYHHTTVNYHVYH
TQRKMQTTSKPTLKQKQFHFNGKKHWKYATNVTLQLNGPNVCGNRCCHGWTVSLKTQKCT
KPRCLPRCHNGAVCRQPNICECRTGFYGARCEFASVTYGLVGLPWALLRPTSPMVSTTTS
GLSITLSPTTSLSPTITLPPTTVIPTTTTPVSAETTAAWRTAGTPASTTNPETKKYYAVR
WQPLTLQEAQLLLLKKALARGGRGDKMTTILMKHIEKERKKLQSASQSDLQDTQTTSVKS
FHTQKGQYTVHAGPPAASNQTAGHRGGTAAGAGRRGAERIKVLFTPTICKVRCTQGRCTN
FCEQGNVTTLYNSEQGGRAALGPGFRVFLCPMLCQNGGVCIQKDRCLCPPTFTGKFCHIP
VATPSTNDIEKPPRIPSVLASQQLLTQSEYILPLQSHSQPSGASGSSMVKVRVQHPPEAS
VKIHQVLKVGYGPGTVREQSETVTWSAGLSGARTSVLPGERAEAPPPKPRVQAQTLHGDS
TYTESSGFKYCFREVRNGQCSSPLPGLRSQDTCCRGIGLAWGINECVLCPPNTGNGVDGS
CPAGFERINGTQCVDVNECLQPGFCENGNCVNTRGSYSCVCRQGYILDASHGICISRKVI
SEDKGQCYRILNSGSGRGSCSVPILRNITKQICCCSRVGKAWGKNCERCPYFGSVAFKEI
CPAGPGYHYSASAIKFNQRVVEQHGTGGPPVISQSTPQTRPQQPASSGAQTPQTSPQQPS
SSGFFTPQTRPQQPDGRALIPQTRPQQPSSGGSLSPQGRPHIPAISVTAGPTRVVTARTP
TQTKRPPVDQRPISPVRPAQPLPSPVTPRPPIPRPVRGVCETMPQVCGQGRCVDQPGGRH
TCICYEGYQHNAQQTHCQDIDECRASPPPCSSGRCQNTEGGYRCSCPSGYQPGPRGTSCI
DVNECIQAPSPCSVGECENTPGRYRCVCPAGFRANFQQTQCQDIDECRQVPNPCNNGRCE
NSPGSFKCVCRTGYKLEGNTCKDVDECEDPLKCPGQACVNSPGSYKCVSCPPGFGLLNEQ
CRDVDECRQTPSLCTNGRCENTPGSYRCVCHTGYKLQGKACTDVDECEDPLRCPGQACVN
SQGSYNCVSCKPGFSMINGQCSDIDECRQSPGPCTNGHCENTQGSYSCACLTGYRLYGDT
CTDADECADPSQCPGQECVNSQGSYKCVSCKPGFGLVDRRCTDVDECLHSPTRCANGRCE
NTAGSYKCACRSGFRLQGNTCTDVNECENALQCPGQECINSEGSFICVACSPGFVAGNGQ
CTDIDECRQTSNLCANGLCENTLGSYRCVCRTGFKLQGSVCIDVDECADSSQCPGQRCVN
SEGSYKCIACKAGHRMQDGLCADVDECQSPDTCGAARLCVNTDGSYRCDCQPGYRTTGLG
RQCRDVNECLEGEYCFPRGECVNTEGSYRCVCSQGYTTSSDGSSCLDVDECARSGPGVCQ
DGRCVNTEGSYQCQCQVGFTTNPEKTACLDVDECSEGAVCRTQRCENTIGSYRCITSCEP
GYRVTRTGECVDINECANETVCGEHAFCQNLIGTYQCMCDQGYTATSDGKGCVDENECET
MQGVCGAARCENVDGSFMCECPGEGEEFDTRSGQCLSTPRPGLPVFSGGSSSSSSTTGLG
PQRRPDASQLPPARPGELRECYYNTEEQSSCSVLARNTTQQECCCTVGQGWGMGCQFDPC
PQLGTAEHQALCPSGRGYVTGPGAFSYKDVDECKLFHPEVCKSGVCVNNIPGYSCYCTSG
YYYDNVFLECIDVDECEAGEDSCPGGICVNTLGSHFCTCVPPLVLDDTQRSCVNSTGLAV
DEKLSFCWQYVTPDLVCQSPLLGGQVTFTECCCLYGEGWGLQCALCPARDSEDYEARCNV
FLRPPEFPPPFPDRYGPDPGPVRGGGGGYRVPYGPDSFPDPIPRRPEYPRPDYDDYTPPG
GSRSGFRGRTPSTFRVPESPYRRPSGYIPERYYDEDDYGPPDAPPRPPFRTLPDPRSELS
FGARPPLPIPEGLPLSLAPLPDSDPYSEEEEEGPEPWRVGPPFPDRRGPGGAPRRVYERQ
YEPYAGLSTEDCGILHGCENGRCIRVVEGYTCDCYEGYELDMTSMACIDINECEVPDSVC
VSGRCINTDGSYRCVCHRGYVMSRRPNHCVAA
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaggagatatgctaacttattcgttcttggggtggcatttattttctttctt
acgttttcgaaattatatgggacactagtgaggcgttcaacccataaaagagcgcacgag
acgcagcggagaactgcgagcaggtaccaccatacgaccgttaattatcacgtttatcac
actcagcggaagatgcaaacgacttcaaaacctacattaaaacagaaacagttccatttt
aatggaaagaaacactggaaatacgcaactaatgtgacactacagttaaacgggcctaat
gtatgtggaaacaggtgctgccacggatggaccgtttcactcaagactcagaaatgcacc
aaaccaaggtgccttccgcgctgccacaacggagccgtgtgcagacagcccaacatctgt
gaatgcagaacgggcttctacggggcccgctgtgagtttgcaagcgtgacctatggcctc
gtaggccttccctgggccttactgcgccccaccagccccatggtcagcaccaccacctca
ggactaagcatcaccctctcacctaccactagcctctcaccaaccatcaccctcccacca
accaccgtcatccccaccaccaccaccccagtttccgcagagaccacagctgcatggagg
acagcggggacaccagccagcaccaccaacccagagaccaagaaatattacgctgtgcgc
tggcaacctcttactctgcaggaggcccagttactgctactaaagaaggcattggcccgt
ggcggtcgaggcgacaagatgaccaccatcctgatgaaacacatcgagaaagagaggaag
aagctccaatcagcctcacagtcagacctacaggacacccagaccacaagtgtcaagagc
ttccacacccagaagggccagtacactgtccacgcgggcccacctgcagccagcaaccag
actgccggccaccgaggaggaacggcagcaggggcaggaaggagaggagctgagcgcatc
aaggtgctcttcaccccgaccatctgcaaggtgcgctgcacccagggacgctgcaccaac
ttctgtgagcagggcaatgtgaccaccctctacaacagtgaacagggggggcgggctgcg
ctgggaccgggcttcagagtcttcctgtgccccatgttgtgtcaaaacggaggggtctgc
atccagaaggatcgctgcctctgcccgccaaccttcactggcaagttctgccacatcccc
gtggccacgccctccaccaatgacattgagaagcctccgcgcatcccctctgtgctggcc
agtcagcagctgctgacccagtcggaatacattctccccctgcagagccacagtcagccc
agcggtgcgtctggctcatccatggtcaaggtgcgggtgcagcaccccccagaggccagc
gtgaagatccaccaggtgctgaaggtggggtatgggccaggcacagttagggagcagtcg
gagacggtcacctggtcagcaggcctctcgggggccaggaccagtgttctgccaggggag
cgggccgaagccccaccacccaaacccagagtgcaggcccagaccctccacggtgactcc
acctacacagaatcctccggattcaagtactgcttcagggaggtccgcaacggccagtgc
agctcacctctcccaggactcaggagtcaggacacctgctgccgagggattggactggcc
tggggcatcaacgagtgtgtcctatgtcctcctaacacaggaaatggagtcgatgggagc
tgtccggctggatttgagaggatcaacggcacccagtgtgttgatgttaatgagtgtttg
cagccaggcttctgtgagaacggcaactgtgtgaacactcgggggagctacagttgtgtc
tgcaggcaaggatacatactggacgcctctcacgggatctgtatctcccgtaaggtgatc
tcggaggataagggccagtgctatcgtatcttaaactctggctctggccgtggtagctgc
tccgtgcccatcctcaggaacatcaccaagcagatctgctgctgcagccgcgtgggcaag
gcctggggcaagaactgtgagaggtgtccctactttggatcagttgctttcaaggagatc
tgcccagcagggcctggctaccactactctgcctctgccatcaagttcaaccagagggtg
gtggagcagcacgggactggaggtccccctgtcatatcccagagcaccccacagaccagg
ccacaacaaccagccagtagtggtgcacagactccccaaactagtccccaacaaccttca
agctcaggctttttcactccccaaactagaccccaacagccagatggtagagctctcata
cctcagaccaggccccagcagccatcgagtggaggctccctgtccccccagggcagacca
cacatcccagccatctctgttacagcaggacccacccgggtggtgacagctcgaaccccc
actcagaccaaacggcctccagttgaccaacggccaatatctccagtgagacccgcacag
cccctcccatctccggtcacgccccgcccacccatccccaggccagtgcggggtgtgtgt
gagaccatgccccaagtgtgtggacagggccgctgtgtggatcagcccggagggagacat
acctgcatctgttacgagggataccaacacaacgctcagcagactcattgtcaagacata
gacgagtgcagggcgtctcccccgccctgcagcagcggccgctgccagaacacagaaggg
ggctacaggtgcagctgcccctctggataccagccgggaccccggggcaccagctgtata
gatgtcaatgagtgcatccaggctcccagtccctgttctgttggggagtgtgagaataca
ccaggccgctacagatgtgtgtgtcctgctggcttcagagccaacttccaacagacgcag
tgtcaagatattgacgagtgtcgtcaggttccgaacccctgtaacaacggccgctgtgag
aatagccctggtagcttcaagtgtgtctgccgcactgggtacaagctagagggcaacacg
tgtaaagatgtggatgagtgtgaggaccccttgaagtgtcctggtcaggcctgtgtcaac
tctccaggatcatacaagtgtgtgtcttgcccaccagggtttgggctgctcaacgaacaa
tgccgagatgttgacgagtgtcgtcagacccccagcctttgcaccaatggtcgttgtgag
aacactcccgggagctacaggtgtgtttgccatacgggatacaaactacaaggcaaggcc
tgcacagatgtggatgagtgtgaggaccctttgaggtgtcctggtcaggcctgtgtcaac
tctcagggttcttacaactgtgtgtcttgcaagccaggcttcagcatgatcaatggacaa
tgctcagatatagatgagtgtcgtcaatcccccggcccatgcaccaacggtcactgcgag
aacacccagggtagctacagctgtgcgtgtctcactggctacagactatacggtgatacc
tgtacagacgcggatgaatgtgcagacccgtcccagtgccctggccaggagtgtgtcaac
tcccagggctcatacaagtgtgtgtcctgcaagccaggctttgggctggtcgacagacgc
tgcacagatgttgacgagtgcctccacagccccactcgttgtgctaacggtcgttgtgag
aacacggctggaagctacaagtgtgcgtgccgatctggcttcaggctacagggcaacacc
tgcacagatgtcaatgaatgtgagaacgctctacagtgtcctggtcaggagtgtatcaac
tctgagggctccttcatatgtgtggcctgtagcccaggctttgtggctggaaatggacag
tgtacagatatcgatgagtgtcggcagacctccaacctatgtgccaacggcctctgtgaa
aacactctcggtagctaccggtgcgtttgtcgcaccgggttcaaactgcagggcagcgtc
tgtattgacgttgatgaatgtgcagactcctcacagtgtcctggccaacggtgtgtgaat
tctgaaggctcctacaagtgtatcgcctgcaaagctggccacagaatgcaagatgggtta
tgcgcagatgtggatgaatgccagagccctgacacctgtggtgcagcgaggctgtgtgtg
aacacggacggctcctaccgctgtgactgtcaaccaggctaccgaaccactggccttgga
cgccaatgtcgagacgtcaacgagtgtctagagggggagtactgcttccccaggggagag
tgtgtgaacacagagggctcctaccgctgtgtgtgttcccagggttataccaccagcagc
gacgggagctcctgcctagatgtggatgagtgtgccaggtcaggcccgggggtgtgccag
gatgggcgctgtgtcaacacagagggctcctaccagtgccagtgccaagtgggattcacc
accaacccagagaagacagcctgtctggatgtagatgagtgctcagagggagcagtgtgt
cggacacagcgttgtgagaacaccattggctcctaccgctgtatcacctcctgtgagccg
ggctaccgggtcacccgcaccggagagtgtgtcgatatcaacgagtgtgccaatgagacc
gtatgcggggagcatgcgttctgccagaacctaattggaacataccagtgcatgtgtgac
cagggctacacagccaccagcgatgggaagggatgtgtggatgaaaacgagtgtgagacg
atgcagggcgtgtgtggcgcggcgcgctgtgagaatgtggatggctccttcatgtgtgag
tgtccaggagagggggaagagtttgatacgcgctcaggacagtgcctcagcacgccccga
ccaggtcttccagtgttctctggcggctcctcctcgtcttcctccaccaccggcctcggt
ccccagcgtcggcccgatgcgtcccagctgccccctgcccggcctggcgagttgagggag
tgttactacaacaccgaggagcagagctcgtgcagcgtcctggcccgcaacaccacccag
caggagtgctgctgcaccgtgggccagggctggggaatgggctgccagttcgacccctgt
cctcagctaggcacagccgagcaccaggccttgtgccccagcggacgaggatatgtgact
gggccaggagcgtttagctacaaagatgtggatgagtgtaaactgttccaccctgaggtg
tgtaagagcggtgtatgtgtcaacaacatccctggctactcctgctactgcaccagtggc
tactactatgacaacgtgtttctggagtgcatcgatgttgatgagtgtgaggcaggggag
gacagctgtccagggggaatctgcgtcaacacattaggctcacacttctgtacctgcgtg
cctcctcttgtgttggacgacactcagcgcagctgtgtcaattccactggcctcgccgtg
gatgagaagctgtccttctgctggcagtatgtcacaccagacctggtgtgtcagagcccc
ctgctgggtggacaggtcaccttcactgagtgctgctgtctgtatggagagggctgggga
ctgcagtgtgctctgtgtcctgccagagactcagaggactatgaggctcggtgtaacgtc
ttcctgaggcccccagagtttcctccccccttccctgaccgctacggtccggacccaggg
ccagttagaggaggaggaggggggtatcgcgtgccctatggaccggactccttcccagac
cccatcccccgcaggcctgagtacccccggcctgactatgatgactacacaccaccaggg
ggcagcaggtcaggcttcagaggcagaacacccagcaccttcagggtcccagagagccca
tacagacggccctcaggatacattcctgagcggtactatgacgaggacgactacggcccg
cctgatgctcctccgagacctcccttccgcaccctcccagaccctcgttctgagctctcc
tttggggcgcggcctcctctccccatccccgagggcctccctctgagtctggcccccctc
ccggacagtgacccctacagtgaggaggaggaggaggggccagaaccctggcgtgttgga
ccccctttccctgacagacgggggccaggcggagccccaaggagagtctatgagagacaa
tatgagccgtatgcaggcctgagcacagaggactgtgggatactgcacggctgtgagaac
ggcaggtgtatccgtgtggtggagggatacacgtgtgactgctacgagggatacgagctg
gacatgacctccatggcctgcatagacatcaatgaatgtgaggttcctgacagcgtgtgt
gtgagcggccgatgcatcaacacagacggctcctatcgctgtgtgtgtcaccggggctac
gtcatgtcccgccggcccaaccactgtgtggcagcataa
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