Oncorhynchus kisutch (coho salmon): 109909007
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Entry
109909007 CDS
T09179
Name
(RefSeq) WD repeat-containing protein 20-like
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109909007
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
109909007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Aladin
Tricorn_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
WDR55
PD40
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
109909007
NCBI-ProteinID:
XP_020363440
Ensembl:
ENSOKIG00005017189
LinkDB
All DBs
Position
LG18:complement(36407658..36420051)
Genome browser
AA seq
690 aa
AA seq
DB search
MPVAPIFIVVSIIISRSKFQFPVRLVCRLLKMAGDGGALKDINEIKSQFRTREGFYKLLT
LSDSQQRGGLPRGLSAGTTVGPGGGPGSIPGGGLGLVQGPGAASSSSAAANSSPAGFLPP
VRVSMVKLQPEDPSEESERVCFNIGRELYFYTYTNIKKAVDLSKPIDKRIYKGTQPTCHD
FNQYSATADSVALIVGFSAGQVQYLDPIKKETSKLFNEERMIDKSKVTCLKWLPKSENLF
LASYASGHLYLYNVEHPCGTAAPQYSLLRQGEGFAVYSCKTKTPRNPLLRWAVGDGGLNE
FAFSPDGVHVACVGQDGCLRVFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDL
VTVWSFAESRVVARGHGHKSWVNVVAFDPFTTSLEDEEPMELSGSEEDLQQGPLHFGRVR
TSSTLSRLSRHSSKGGSPSVTYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRALTNTFGPT
IPPSVSSTINNTTGGGVIGGVEGHHHPTTNPHQPPPMPLPLPRSLSRSNSLPHPAVANVS
KGQSTTEGGGGSGGGNATPFSIGRFATLSLQERKSDKSGGSGVGGEKEHKRYHSLGNISK
SNDKINVAPRSSRLDAAKVLGTTLCPRMHEVPLLEPLVCKKIAHERLTVLVFMDDCIITA
CQEGLICTWARPGKVNLTAQNGNSPSGTVV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgctcccattttcattgtagtttcgataattatttccaggtcaaaatttcag
tttcctgtgcggcttgtttgtaggctactaaaaatggccggtgatggaggcgcactgaag
gatatcaatgagattaaatcccagttcaggactagagagggtttttacaaactgctgacc
ctctcggattcacaacaacgaggcggactacctcggggtctgtccgcaggtaccacggtg
ggccccggtggtggaccgggttcgatacccggtggtggtttaggtctggtgcaggggccc
ggagctgcctcctcctccagtgccgcagccaactcctctccggcgggcttcctccctcct
gtcagggtctccatggtgaagcttcaaccggaggacccgagtgaagaatccgagagagtg
tgttttaacatcggaagagagctttatttctacacttacacaaatatcaagaaggctgtg
gaccttagtaaacccatagacaagcgtatctacaagggcacccagcccacctgccatgac
ttcaaccagtactctgccacagcagacagtgtggccctcattgtgggcttctcagcaggc
caggttcaatacctggaccccattaagaaggagacaagcaagctcttcaatgaggagagg
atgatcgacaagtccaaggtgacctgtctgaaatggctgcccaagtccgagaacctgttc
ctggcctcttacgccagtggccacctctacctctacaatgtggagcacccgtgtggcacc
gccgccccacagtactcgctgctccgccagggcgaaggctttgcagtctattcctgcaag
acgaagacgccccgaaacccgctgctgcgctgggccgtgggcgatggaggcctcaacgag
tttgccttctcgccagacggtgtgcatgtggcgtgtgtgggccaggacggctgcctgcgc
gtcttccactttgactccatggagctgcagggcgtgatgaagagctacttcggcggccta
ctgtgcgtctcctggagccccgacggcaaatacctggccacaggtggcgaggacgacctg
gtgacggtgtggtcattcgcagagagccgtgtggtggcccggggacatggccacaagtcc
tgggtgaacgtggtggcctttgaccccttcaccaccagcctggaggacgaggagcccatg
gagctgagcggcagcgaggaggacctacagcaggggccgctgcactttggccgtgtgcgc
acgagcagcacgctgtcacgcctctcccgccacagctccaagggaggctcgccctccgtc
acctaccgcttcggctcggtgggccaggacacccagttctgcctgtgggatctgacggat
gatgtgctgtacccgaggctgcccctgtcccgtgccctcaccaacaccttcggccccacc
atccctccctcggtcagcagcaccatcaacaacactacaggtggaggggtcataggagga
gttgagggccaccaccaccccaccactaacccccaccagccaccccccatgcccttgcca
ctcccccgctccctgtcgcgctccaactccctcccccaccccgccgtggccaacgtctct
aagggccagagcacgacggagggtgggggagggagcggagggggcaatgccacccccttc
agtatcggccgcttcgccacgctctccctgcaggagcgtaaatcagacaagtctggaggg
agcggtgtgggcggggagaaggagcacaagcggtaccatagcctgggaaacatcagcaag
agcaatgacaagatcaacgtagcgccacgcagcagtcgcctggacgccgccaaggtcctg
ggcaccaccctgtgtccgcggatgcacgaggtgcccctgctggagcccctggtgtgtaag
aagatcgcccacgagagactgaccgtgctggtgttcatggacgactgcatcatcaccgcg
tgccaggagggcctcatctgcacctgggcacggccgggtaaagtgaacttgacagcacag
aacgggaactcgcccagtggcacggtggtatag
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