Oncorhynchus kisutch (coho salmon): 109909033
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Entry
109909033 CDS
T09179
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109909033
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oki03310
]
109909033
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109909033
Nuclear receptors [BR:
oki03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
109909033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
109909033
NCBI-ProteinID:
XP_020363497
Ensembl:
ENSOKIG00005027858
LinkDB
All DBs
Position
LG2:20277521..20296880
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AA seq
453 aa
AA seq
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MFDYMDFLAVGPGETLDFYTASPCMLQEPSQTACFTGLTETDWQVHRVAQSAVETQSSSS
EDLFASPLSPLPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKNMVYTCHRDS
NCIINKITRNRCQYCRLQRCFAAGMSRECVAHKGNHTRAVRNDRSKRKEKKETPKMTIIE
TYELTAELGCIVEKICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCI
IRVVEFAKRVPGFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQ
IHNAGFGPLTDQVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLL
EALKIYSRKRRPSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEE
MENLEKQKHSEEEQRADKNITPTHTHSPCPHST
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggattttctcgcagttggtccaggagaaacgctggacttctatact
gcaagtccttgtatgctccaggaaccatctcaaaccgcatgcttcactggactaacagaa
acggattggcaagttcatcgggtcgcgcaatcagctgtggaaacccagagctccagctca
gaggacctgttcgccagtcctctctcacctctgccccctcctcgcacctacaaaccctgc
ttcgtgtgccaagacaagtcctcaggctaccactatggcgtcagtgcttgtgagggctgt
aagggtttcttccgtagaagtgtccagaagaacatggtttacacgtgccaccgggacagt
aactgcatcatcaataaaatcaccaggaaccgctgtcagtactgtcggctacagaggtgc
ttcgccgcgggcatgtccagggagtgtgttgcccacaagggaaatcacaccagagctgtc
aggaatgaccggagtaagaggaaggagaagaaggagactcccaagatgaccatcatcgag
acatatgagctgacagcagaactgggctgtatagtggagaaaatctgtagggcccataga
gagaccttcccttccctctgccagttgggcaaatacactacaaactcaagctcagacact
aggatccagttggacctggggctgtgggataagttcagtgagctggccaccaaatgtatc
atcagggttgtggagtttgccaaacgggttcctggtttcaccggcctgactataactgac
cagatcaccctcctcaaagcggcctgtctggacattctgattctgcggatctgtacaagg
tacactcctgaccaggacactatgaccttctcagacgggctgaccttgacccgtacacag
atccacaacgctggctttggcccgctcacagaccaggtgttcaccttcgctggccagctg
ctgcccttggagatggatgacacagaaagtggcctcctcagcgccatctgcctggtgtct
ggagatcgccaggacctggaggagccgtctaaggtggaggtcctgcaagagcccttactg
gaggccttgaagatctactcccgtaaacgccggcccagcatgcccctcatgttccccaag
gtcctcatgaagataaccgacctgcgcagcatcagcgccaaaggagctgagcgagtggtg
acgttgaagatggagatcccaggttccatgcctcctcttatccaggagatgctggaggag
atggagaacctggagaagcagaagcattctgaggaggagcagagagcagacaagaacatc
acacccacacacacacactctccatgtccacacagtacatag
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