Oncorhynchus kisutch (coho salmon): 109909171
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Entry
109909171 CDS
T09179
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109909171
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109909171
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
109909171
NCBI-ProteinID:
XP_020363753
Ensembl:
ENSOKIG00005013827
LinkDB
All DBs
Position
LG18:25774164..25806355
Genome browser
AA seq
2121 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHHELSSEEDGEWESGLSYECRTLLF
KAVHNLLERCLMNRSFVRIGKWFVKPYEKDEKPVNKSEHLSCAFTFFLHGDSNVCTSVEI
AQHQPVQRLGEEHLSLAQQNASPLQVILSPYGLNGTVTGQSFKMSDHPTQKLIEEWRQFY
PISPSSKDRPEDKMEDADWEDDSLAAVEVLVAGVRMVYPACLVLVPQSDLPALAPQGSAN
PSPVLCEGLGAHRDPAMSSVTLTPPTSPEEAQTDSQAAQRWLKLCSTVDGFSSNSSGIHG
SKIPRRLAAQVVESVWQECTTNRAQNKRKFATLTNGTCEEEEGDKTGVWDFVEFSHRAHC
NCSRHKNQKQRSGSTSGNPPSVGQPSQPLPKHKLGEKLEKGEKQQKRPQTPFHHRSYVFE
EQAMEPQRLCMRTQDEGPYPSLHHVDTAPSKAPMLHTHRSLQDLAGSPQPPPLSPHPCER
GEEDPGAMKSSSTPIHQHFYPPSSEPCLLPQKTSPDEPHLETLPLPFPPAYPDSLEPTVY
VGSAINPNEDSAHNPWKYFNLPRKKTSDFFTPLLPVDKLQDDSGEGGGQENMVSVTELMS
GSGRPLKVSEDLVRTYTQRRNSHLVAAMADEDQEEEPDPYAFVEGDEEFTFTDKKDKPGS
DRETSKRHKGDDCSGTSADDGQGAAGGKPVPSTSLIHETDLAVSINDLDNLFNSDEDELA
QPGSRRAGVHGDKFGSKEHKTSNLDPLSCISSADLHKMFPTPPSLEQHIMGYSPMNTGGK
DYGGLETGVGLTLLDGSQFSSHYKMEVEEGFCSPKPSEIKDFSFVYKSEACKAFTGCSMF
APLKMLPSQCMMPIKLPEDCVYTPSWNMGKLELIPPVPTMGLLTKDGNIPSVEPDYQSYT
PQTHTPFMSNSAPPSNSGTGILPSPATPRFSAPTPRTPRTPRTPRGPASVQGSLKYDNSD
LYSPASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVCNM
NIRGADVGVYLNDNGEAQYPCTCGFSAVVNRRYGSSAGLFLEDELDVVGRGSDAGRDSER
RFQELRAASLHRTGNPTERPPDELILLLQDQCTNPFSRMAGVEYPKALSSGPSHSFLRVE
ERDCYNDCYMALEHGRQFMDNMSGGKVDEVLVKSTCLHNWPKCKAAEVSRLFSQDVLRVL
LSLQPVLQDAIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEY
DFVVLSPFGLPYWEKLLLDPFGSHRDVGYVVICPENEALLRGAKSFFKDLTAAYEACRLG
QHRPICKTHADGILRVGTAEGRNRAEQPLSDWFLKMASSNGNSEAFSKLKLYAQVCRHDL
APYLAGQSLDSSLLNQRGPTVASPQSSSSQSPSSTTPSSGPQSSTSSSTAQPANTNSTPP
SSTGPQAMGGIGGVGMPSAKPSSYTPYGTSGLQGSVSQNGPQSCPQTAGENGPTANQPQA
STEPVETTLERDKVGVPTDGESHAVTFPPSIVVYIVDPFSYEDGERDTHSSVWTLGLLRC
YVEMLQFLPPHIRNCVSVQIIPCQYLLQPVRIEERHLYGQHLKSLAFSVFTQCRRPLPGN
TNIKALTGFGPGLAIDMALRSTERPECLRLYTPPFILAPIKDKQTELGETFGEASQKYNV
LFVGYCLSHDQRWLLASCTDQSGELLETCIISIDVPNRARRKKGSARRLGLQKLWEWCLG
LVQVTSLPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCRMCGISAADTPSI
LSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMV
QVNNGTTEQNLDIAFNPINPDGSDGMGIFDLFDNDMVDPDLINILPNSPTTSPVHSPGGH
YHQGGDGSKGQSTDRMESHEEALNILQQPMALGYFISTAKAGPLPDWFWSACPQAQNQCP
LFLKASLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRR
SCLPVHFVVLNQMYNFIMNML
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatgttttgtaccaaacggggccagtttggaggactgccactccaacctattt
tgcctggctgacctgactgggataaaatggcggcgttttgtgtggcaggggcccacttcc
tcgcccatcctgttccctgtgacggaggaggaccccatcctgtgcagcttcagccggtgc
ctagcggccgatgtgctaagcgtgtggcgaaggcaccacaccccgggtcgccgcgagctc
tggctcttctggtggggggatgaccccagcttcgccgagctcatccaccacgagctgtca
agtgaggaggacggcgagtgggagagtggcttgtcctatgagtgccgtacactcctgttc
aaagctgtccataaccttttggagcgttgcctcatgaaccgcagctttgtccgtattggc
aagtggtttgtcaagccctacgagaaggatgagaagcctgtcaataagagtgagcacttg
tcgtgtgcattcacctttttcctgcacggggacagtaacgtgtgcaccagcgtggagatt
gcccagcaccagcctgtccagaggctaggtgaagaacatctgagcctggcacaacaaaat
gccagccctctacaagtcatcttgagtccatacggtctgaacgggacggtcacgggccag
tccttcaagatgtctgaccaccccacccagaaacttattgaggagtggaggcagttctat
cccatcagccccagctccaaggaccgccccgaggacaagatggaggatgcagactgggag
gacgactcactagcagccgtggaggtccttgttgctggagttaggatggtgtaccctgct
tgtctagtactggtgccccagtcagacctccctgcactggccccacagggatcagccaac
ccctcacccgtcctgtgtgagggcctgggggcccacagagaccctgccatgtcctctgtc
acccttacccctcccacatcaccggaggaggcccaaacagattctcaggcagcacagagg
tggttgaagctctgctcgacagtggatggtttcagctccaacagcagcggtatccacggc
agcaagatcccccgcaggctggctgcccaggtggtggagagcgtgtggcaggagtgcact
accaaccgggcccagaacaagaggaagtttgctacattgaccaatggtacctgtgaggag
gaggagggggacaaaacaggagtgtgggattttgtggagttctcgcatagggcacactgc
aactgctcaaggcataaaaaccagaagcaacgatcaggcagcacctcaggaaaccccccg
tcggtgggccagccctcacagccgctgcccaaacacaagctgggcgagaagctggagaag
ggggagaagcagcagaagaggccccagacacccttccaccaccgcagctatgtgtttgag
gagcaggccatggagccccagaggctgtgtatgagaacccaggacgagggcccctacccc
agcctgcaccacgtggacacggccccttccaaagcccccatgttgcacacccacaggtcc
ctccaagacctggccggctccccccagccccctcctctcagcccccatccctgcgagcgc
ggggaggaagaccctggggccatgaagagctcctccacgcccatccaccaacacttctac
cccccctcctccgagccctgcctgcttccccaaaagacctcgcctgacgagccccacctg
gagaccctacctctgcctttcccacctgcctaccctgattccctggaacccactgtctat
gtgggatcagccatcaaccccaacgaagactcggcccacaacccctggaaatacttcaac
ctgccacggaagaagacctccgacttcttcacaccactgttgcctgtggacaaactacag
gatgactccggggaaggaggagggcaggagaacatggtctctgtcacagaattgatgtct
ggctctggcaggcctctgaaggtgtctgaagacctggtgaggacctacacccagaggagg
aacagccacctagtggctgccatggctgacgaggatcaggaggaggagccagacccctac
gccttcgtggaaggagacgaggagttcactttcactgacaagaaggacaaacctggctcg
gacagagagaccagcaagagacacaagggtgacgattgcagtggaacctcagcagatgat
ggtcagggtgcagctggtggaaagcctgtaccctccaccagccttatccatgagacagac
ctggctgtgtccatcaacgacctggacaacctcttcaactcagacgaagacgagctagcg
cagcctggatccaggagagcaggagttcatggagacaagtttggcagtaaggaacacaaa
acatcaaatctggaccctctgtcctgcataagctcagctgacctgcacaagatgttcccc
acccctccctccctggagcagcacatcatgggctactcccccatgaacactgggggcaag
gactacggtggcctggagaccggggtgggcctcactctgctggatgggagccagtttagc
agccactacaagatggaggtggaggaaggcttctgtagccccaagccctctgagatcaag
gacttctcgtttgtttataagtcagaggcgtgcaaggcattcacgggctgctccatgttt
gctccgctgaagatgctgcccagtcagtgtatgatgcccatcaagctgccagaggactgt
gtttacacacccagctggaacatgggcaaactggagctcataccccctgtgccaaccatg
ggcctcctcaccaaagacggtaacatccccagtgtggagccagactaccagagctacaca
ccacagacccacactcccttcatgtccaacagtgccccacccagcaacagcggcacgggc
atcctgccctccccggccacaccccgcttctccgcccccaccccacgcactccccgtacc
ccacgcaccccaagagggcctgccagtgtccagggatcgctcaaatacgacaactctgac
ctctactcgcctgcctccaccccttctacttgccgacctctcagctcagtcgagccagcc
actgtgccctccatccctgaggcccacagcctctacgtcaccctcatcctctctgagtcc
gtcatgaacctcttcaaggactgtaactttgacagctgctgcgtgtgcgtgtgcaacatg
aacatccgtggcgctgatgtgggcgtgtatcttaacgacaacggcgaggcccagtacccc
tgcacctgtggtttcagcgccgtggtcaaccgtcgctacggcagctcggccggtctcttc
ctggaggatgagctggacgtggtggggcgtggctcggacgccggccgggactctgagagg
cgtttccaggagctgcgcgctgcctcccttcacaggaccggcaaccccaccgagaggccc
ccagacgagctcatcctgttgctgcaggaccagtgcaccaacccattctcccgcatggct
ggtgtggagtaccccaaggcgttgtcctccggcccctctcactcttttctacgggtagag
gagagggactgctataacgactgctacatggctctggagcatggccggcagttcatggac
aacatgtcaggaggcaaggtggacgaggtgctggttaagagcacgtgtctacacaactgg
cctaaatgcaaagctgcagaagtgagcaggctgttctctcaggacgtgctgcgggtgctg
ctctcccttcagcctgtactccaagatgccatccagaagaagagaagcgtacgttcctgg
ggcgttcagggacctctcacctggcagcagtttcacaagatggccggcaggggatcctac
ggcactgacgagtctccagagcccctcccaatccctaccttcctggttgggtatgagtat
gactttgtggtgctgtcgcccttcggcctgccttactgggaaaagctgctgctggacccc
ttcggctcccacagggacgtgggatatgtagtcatctgtcccgagaatgaggctctgctc
cgtggggctaagagcttcttcaaggaccttacggccgcgtacgaggcctgtcgactgggt
cagcacagaccaatctgtaagactcatgcagatggaatattgcgggttggtacagcagag
ggcaggaaccgggcagagcagcctctcagtgactggttcctcaagatggccagcagcaac
ggaaacagcgaagccttcagcaaactcaaactgtatgcccaagtgtgccggcatgacctg
gctccatacctggctggacagtctctggacagctctctgttaaaccagcgtggccccact
gtggcctcccctcagtcctcctcctcccagtcccccagctccaccaccccctcctcaggt
ccccagagctccaccagcagcagcactgcccagcctgccaacaccaacagcaccccaccc
tcctccacaggcccccaggcaatgggagggatagggggagtaggaatgccgtcggccaag
cccagctcctacacaccatacgggacatcaggcctgcagggcagcgtctcccagaatggg
cctcagtcgtgtcctcagactgcaggggagaatggccccactgccaaccagccccaggcc
agcaccgagcccgtagagaccacattggagagagacaaggtgggcgtccctacagacgga
gagtcccatgctgtgacgttcccgccgtccattgtggtttacatcgtggaccccttcagc
tacgaggacggggagagggacacccactccagtgtgtggacactgggtctgctgcgctgc
tatgtggagatgctccagttcctgccgcctcacatcagaaactgtgtgtctgtgcagatc
attccctgtcagtacctgttgcagcctgtgcgcattgaggagcgccatctgtacggtcag
cacctcaagtccctggccttctcagtgttcacgcagtgcagacggcccctccccggcaac
accaacatcaaggctctgacgggcttcggcccaggcctggccattgacatggcactgagg
agcacagagaggccagaatgtctgcgtctgtacacaccaccgttcatcctggcacccatc
aaagacaagcagacagaactaggggagacgtttggcgaggcctctcagaagtacaatgtg
ctgtttgtgggctactgcctgtcgcatgaccagcgctggctcctagcctcctgtactgac
caatcaggagagcttctggagacatgcatcatcagcatcgacgtgcctaacagggctcgg
aggaaaaagggctcagccagaagactgggcctgcagaagctgtgggagtggtgtctaggc
ttggtgcaggtgacatcactgccctggagggtggtgattggccgcctgggcagaatgggc
cacggagagttacgagattggagtattctactgagcagaaggaacctgcagtctctcagc
aagcgcctcaaggagacctgcaggatgtgtggcatctctgccgcagacacacccagcatc
ctcagcgcctgcctggtcgccatggagcctcaaggctcctttgtcatcatgccagactct
gtgtcgacaggctcagtgtttggccgcagcaccactctgaacatgcagacgtcccagctg
agcactcctcaggacacgtcctgcacccacatcctggtgttccccacctcggccatggtg
caggtgaacaacggcaccaccgaacagaacctagacatcgccttcaaccccataaaccct
gatggttcagatgggatgggcatctttgacctgtttgataatgacatggtggaccctgac
ctcatcaacatcctgcctaactcccccaccacctcccctgttcactccccgggtggacac
tatcaccaggggggagacggcagcaagggccaaagcacagaccgtatggagtcccatgag
gaggccctgaacatcctgcagcagcctatggctctgggctacttcatctccactgccaag
gctggccccctacctgactggttctggtcagcctgcccccaggcacagaaccagtgccca
ctgttcctcaaggcctccctgcacctccacgtgtcctcggtccaatcagacgagctcctc
cacagcaaacactcccaccctctggactccaaccacacctcagatgtgctcaggtttgtg
ctggagcagtacaacgccctctcctggctgacgtgtgaccctgccactcaggaccggcgc
tcctgtctgcctgttcactttgtggtgctcaaccagatgtacaactttatcatgaacatg
ctctga
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integrated database retrieval system
