Oncorhynchus kisutch (coho salmon): 109909219
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Entry
109909219 CDS
T09179
Name
(RefSeq) tsukushin isoform X1
KO
K08130
tsukushi
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oki00535
]
109909219
Proteoglycans [BR:
oki00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
109909219
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_LRWD1
LRR_EndoS
LRRNT
LRR_RPS2
LRR_9
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
109909219
NCBI-ProteinID:
XP_020363859
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Position
LG18:23023702..23047431
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AA seq
356 aa
AA seq
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MVKSMMAFVLCVSLWMLLAVHGQAGAVKNCHPGCHCEVESFGLFDSFSLTRVDCRGVGPS
TNPISIPLDTAHLDLSSNSMSLLTDTMLSGPGYTTLVSLDLSNNLISMVSPKALSRLRYL
ESLDLSHNSLEGLNEGCFSGLPLAEVDLSHNHFREFDMDMFITKDHGEPISVDLSHNLLT
VVSWSSSRSPLLHVQSLTLAANQLRAVPKLKGILLRDLNLDGNSISRIEEGAFEDLKDLV
YLSLSGLPELFNIQPNCFRGLQNLQVLDLSNNAKLKTLSPAVFSGLVSLQELNLSNSGVT
SLPNNMLSHLPIIKSITLGQNIHCWRAQKQGQFHRQLGQEQKHDEVLTCDVEGVIS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagagcatgatggcgtttgtcctgtgtgttagcctgtggatgctcctggctgtc
catggccaagctggagcagtgaagaactgccacccgggttgccactgtgaggtggagagc
ttcggcctgttcgacagcttcagcctgaccagggtggactgcaggggagtgggccctagc
accaacccaatctccatccccctggacactgcccacctggacctctcctccaactctatg
tccctgctgaccgacaccatgctctctgggcctggctataccaccttggtcagcctggac
ctcagcaacaacctcatctccatggtcagccctaaggccctgtccaggctgcgctacctg
gagtctctggacctcagccacaactcgttggagggcctgaacgagggctgcttctctggc
ctccccctggccgaggtggacctcagccacaaccacttccgagagtttgatatggacatg
ttcatcactaaagatcacggagagccaatcagcgtggatctgtcccacaacctgctgaca
gtggtctcctggagttcttctaggagccccttgctacatgtccagagcctgactctagca
gccaaccagctgagggccgtgcccaagctaaaaggcatcctgctgagggacctaaacctg
gatgggaacagtatctcccgcattgaggagggtgcttttgaggacctcaaggaccttgtt
tacctgtccctcagtgggcttcctgagctctttaacatccagcccaactgtttcagaggc
ctacagaaccttcaggtcttggacctctccaacaatgccaagctaaaaacactgagccca
gctgtgttcagtggacttgtgtctctacaggagctcaatctgtcaaactctggagtaacg
tcattgccaaataacatgctaagtcacttgccaatcatcaagagtatcaccctgggccag
aatatccattgttggagggctcaaaagcagggccagtttcacaggcagctcggacaggaa
cagaaacatgacgaggtgctaacctgtgacgttgaaggggttatctcatga
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