Oncorhynchus kisutch (coho salmon): 109909234
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Entry
109909234 CDS
T09179
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109909234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109909234
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109909234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
109909234
NCBI-ProteinID:
XP_031651386
Ensembl:
ENSOKIG00005007783
LinkDB
All DBs
Position
LG18:complement(21192387..21514559)
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AA seq
396 aa
AA seq
DB search
MEGDGSQATSGGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFTKFGEIRECMVMRDPTTK
RSRGFGFVTYVDAASVDNVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKVFVGGLSA
NTVVEDVKLYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEVEDVVEKVCEIHFHEINNKM
VECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSY
QFPGFPATAYGPVAAAAVAAVRGSGFPDYGFYSGAGPSDLRGPPCSFADYGSLGPQAAQM
LQHSEHHATSACNSPLQHHLQHSPDPFKSPGTNQARPGAFPGTNSPGPVADLYGTTSQDS
GVGNYISAASPQPGSGFGHSIAQSISGGPGKTGRSF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgggagccaagccacatctggaggaagccctaatgattcgcaacacgac
ccgggtaaaatgtttatcggtggtctcagctggcaaacttcaccagacagcctgagagac
tattttactaaatttggggaaatcagagaatgtatggtgatgagagatccaacgacaaaa
cgctccaggggctttggattcgttacttacgtagatgctgccagtgtagataacgtctta
gctcagccacatcacgaattagactcaaaaacgatcgatcctaaagttgccttccctaga
cgtgctcaacccaagatggtcacaagaacaaagaaagtattcgtaggaggattatcagcg
aacacagtagttgaagatgtgaagctgtattttgaacagtttggcaaggtagaggacgcc
atgctcatgtttgacaaaacgactaacagacacagaggtttcggctttgtaacttttgag
gttgaggacgttgtggagaaagtatgcgagatccactttcatgaaatcaataataaaatg
gtagaatgcaagaaggcccagcccaaggaggtgatgttccctccaggtacgcgaggcagg
gccaggggcttgccctacaccatggatgccttcatgctggggatgggcatgctgagttac
ccaaacattgtagcaacgtacggccgtggatacactggttttgccccgagttacagctac
caattccctggcttcccagcgacggcgtatggaccggtggcagcggcggcagtggcggca
gtgcgtggctcagggttcccagattatgggttctattccggggccgggcccagtgacctg
cggggccccccctgctcctttgccgactatggctccctggggccccaggctgctcagatg
ctgcagcacagtgagcatcatgccacctccgcctgcaactcccccctccagcaccacctg
cagcacagcccggacccctttaagagcccaggcaccaaccaggcccggcccggagccttc
cctggcaccaacagtcccgggcccgtggctgacctctatggcactacaagccaggactcc
ggcgtgggcaactacattagtgctgctagcccccagcctggctctggcttcggccacagc
attgctcagagtatttcaggaggcccggggaagaccgggcggagtttttaa
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