Oncorhynchus kisutch (coho salmon): 109909359
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Entry
109909359 CDS
T09179
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04517
IgSF CAM signaling
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109909359
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109909359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109909359
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109909359
Intermediate filaments
Intermediate filament-binding proteins
109909359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
109909359
NCBI-ProteinID:
XP_031651918
Ensembl:
ENSOKIG00005047055
LinkDB
All DBs
Position
LG18:40281560..40348950
Genome browser
AA seq
2716 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLAGSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTVILRFQIQVIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVHIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAIE
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITAQAERVQTLNSAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LVTQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVCEAVDKHRMHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSDHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEHFEGISVEWEELKHTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVH
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPTT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELSQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADLLVQSYTSLDHRLHQLEGQLCYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASIPQQGQVMETVGERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQHLMKKNQTLQRELQGHRASVENVLERANVIASIRSPEAD
CVRAGLEQLSGLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKCQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFTDCREILAQIDDKQRRLPEVRACQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPRDVSSVEVLMNYHQSLKSEVEARSKSVLQCIEMGKTLLA
ARNPAAEEIKEKLDKVVAKQYELSEKWDKHWEVLQHMLEVHQFAQEAVVAEAWLTAQEPF
INSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKMKAEQSKLPPTPLLG
RKVFLDPQETSPARSQGSPLMRRIIYEQAEHRAERPSQEPLPSSVARRLGSTVANYTPIM
NGSSGYRSSLEAWAMPVMGGVVGGVVGVAAGLGTTAMEARGVAAGLGTAASEARGLAVGL
VTPAVEAKGIAASLVTGAATAVEVKASQYLRQPKIKHMDDMVTPMLVACRLEKVREKEVR
EREQRERERDIVLIEPAPVMPVMAEVVLQEMGREGMGRERLNSEPSSRDHRAGSSRSEPQ
QRDRDRDSRDSRDSHREARLERQHSSEVLMIQARRDELPQEVWRERAERKERKLERQTSS
EQEGHGHEGRRKDRHRTERQESSEHDTAKEQSDRRSTEKRSGGQTLFDIVEQLKDREAAT
ARGEVPKVPNGVPEKSSGRPDRPRARDRPKPRRRPRPKDHSAGEATTRRSRSAPEPGMAQ
SVSPSVLQPPSHTAHHEGFLFRKLDIETMKKSSNSRSWVNLYCVLNKGEIGFYKDAKNTA
TPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKTKDGSEFLFHAKDESQDDLKAWTTNINK
SIAEHVEIAKWGQPQPTTSSTDEGTRRDGSKADNKSERGEKSDRGERPERAERSERSDKG
ETKSDTKRSEKSSKKK
NT seq
8151 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccaacgccagctcaacaacaac
aacacccgtctggccggcagctcgggacactgggaaactgaggtcaccagctccaagctg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggcaagagtgtcctgtcgaatcgctgacctctat
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcgtatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgtctcacccttggcctcatctggaccgtcattcttcgcttccagatc
caggtgattaagattgagtgtgacgacaacagggagacgcggtcggcaaaggatgccctt
ctcctctggtgccagatgaaaactgctgggtactctgaggtccacatccagaacttcacc
acctgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtcaaatgccacacacaacctccagcaagccttcaac
atagctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacagag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgag
ggtcagaagatgatcgatcgatatgaggccctggcctcggagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaagtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaacaaggcgtgggagaggctg
gagaaggcggagcatgagagaggtgtggccctacgtcaggagctgattcgccaggagaag
ctggagctgctggctcagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagctgtggaggcc
gccatgaagaagcacgaggccattgaggcagacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactatgacatccggcgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggttggagaagaacctggctctgcagaagaccttccaggacatggtctat
atgatcgactggatggaggacatgcaggtccagctcctgtccaaagacttcggcaagcat
ctgctggaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcacagcg
caggcagagagggtgcagacccttaactcagccgctctcaaattcaccaccattgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccatgtcagcacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaggagtctcagcacctc
tgggccttcttccaggaggtggaggagtctgaggcctggatccgcgagaagagctccatc
ctggtcacccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagaccatgaagaag
ggtaagcagatcctgatggagaagagtttcggcacggggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcggcgcagagactgggccacctg
caggaggcactcaatttcttccagttcagcacagagacggacgacctgctggcctggctg
caggacgcctaccgcctggtttccagcgaggactttggccacgatgagtactccacccag
tcactgctcaagaagcaccggggtgtgtgcgaggccgtggacaagcaccggatgcacgtg
gtaactctgcgcaaacacatggtggcgctgccactgcattaccgggagctggacgaggtg
cagtcgaggatgggcgaggcggagcagctgtacgccgaggtggccgaggtggccgtcctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtagaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtgatcac
cccagctcgacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaaaaaggatcacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagatcaagtctcagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggccatctcgcacccggccaaggccatggaggtcctggagcacttcgagggcatc
agtgtggagtgggaggagctgaagcacacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcac
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccgccacgcggcgctgaaggaggagatcgggaggtacgaggaggactacgagcgg
ctacaggcggtcaacgagctgctggaggccgaggaggctccgctgccatacgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggcccacgttgagctccccaccacg
gtggagacggtggaggctgccatcaagaagcacaaggacttcaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgtatcagggagcgtgtggacaccctcgctaacagaggcaaccagaac
cgggaattggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctgtcccagaacaaggagtggctggagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggacctggagagcaccacccaggccaaggcccgccagctgtttgaagccaac
cgggccgacctgctggtgcagagttacaccagcctggaccatcggctgcaccagctggaa
ggacaactgtgctacgtggaccagggtcaggacctgacgagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctccatcccccagcagggccaggtcatggagacggtcggcgagcgccag
gccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcgactgcctgccgccacgtctcaggagcacggctccagtctccaggctgtg
cagcacctcatgaagaaaaaccagactctgcagagggagctgcagggccatcgggcgagc
gtggagaacgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcagcgggctgtggggtctgctgtgggccgagaca
gagagaagacagctggtgctggatgccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagtgaacaggagctgcacatgatgaacgaggaaaagggc
aaggatgagcccagcaccctgcagctactgaagaagcacctggtactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgagcagatcagtaagtgtcagtctcagatggaccggctgtacgtg
tctctgaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccatgaggtggatgagctggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagttcaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggatgagctgatcgactacggccacgccgaggccgccaccatcgccgagtggaaggac
ggcgtgaacgaggcctgggctgacctcctggagctcatggagacccgggcacagatgctg
gccgcctcgcaccagctccacaagttcttcaccgactgccgcgagatcttggcccagatc
gatgataagcaacggaggctgcccgaggtgcgggcgtgccagggtggcactgccaacacc
agcaccctgcagaggctcatgcacagcttcgagcacgacattcagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggcgattgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacgtcc
tgtgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagggatgtgtcctcagtggaggtactgatgaactaccaccagagcttgaagagcgag
gtggaggcgcgcagtaagagtgtgctgcagtgcatcgagatgggcaagacgctgctggcc
gcgcgcaaccccgctgctgaggagatcaaggagaagctggataaggtggtggccaagcag
tacgagctgtctgagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtg
caccagtttgcccaggaagcggtggtggccgaggcctggctcacggcccaggagcccttc
atcaatagcaaggagctgggtgccagtgtggacgaggtggagcagctcatccgccgccac
gaggccttccgcaaggccgccgccacctgggaggagcgcttcagctcactacgacgcctc
accacggtggagaagatgaaagcagagcagagtaagctccctcccacccccctgctgggt
cgaaaggtgttcctggacccccaggagacgtcccctgcccggagccagggctccccactg
atgagacggatcatttacgagcaggccgagcacagagctgaaaggccctcccaggaaccc
ttgccctcctccgtggcccgccgcttgggatccaccgtggccaactacacccccatcatg
aacggctccagtggctaccgcagcagcctggaggcctgggccatgcctgtgatgggggga
gtggttggaggtgtagtgggggtggcagctggcctgggaacaaccgccatggaggccaga
ggggtagcagcagggttggggactgccgcctcggaagccagagggttggcagtaggattg
gtcacccccgcggtcgaggccaaagggatagctgcaagcttggtgactggtgcagccacg
gcagtggaggtgaaagcctcacagtacctccggcagcctaagatcaaacacatggacgac
atggtgacgcccatgctggtggcgtgtaggctggagaaggtgagagagaaggaggtgaga
gagagggagcagagagagagggagagagatattgtgttaatagagccagcgccggtgatg
ccggtgatggccgaggtggtgctccaggagatggggagggaggggatgggcagggagagg
ttgaacagtgagcccagcagcagagaccaccgggcggggagcagccggtcggagccccag
cagagagacagggacagagacagtagggacagtagggacagtcacagggaagccaggctg
gagcgccagcactctagtgaggtgctgatgattcaggcacggcgggatgagctgccccag
gaggtgtggcgggaacgggccgagcgcaaagagaggaagctggagaggcagacgtccagc
gagcaggaaggccacggacacgaaggccggaggaaagaccgccaccggacggagagacaa
gagtccagtgaacacgacacagccaaggagcagtcagacagacgttctacggagaaaagg
tcaggcggccagaccttgtttgacatagtggagcagctaaaagacagagaggcagcaacg
gcccgaggggaggtccctaaagtgccgaatggcgtgccagagaagtcttccggacgtcca
gaccggccgcgagcacgggaccgccccaagccccggcggagacccaggcccaaggaccac
tctgcaggagaggccaccacccggcggtcacgctcggcgccagagccagggatggcccag
agcgtgagcccctcagtcctccagccgccgagccacactgcccaccacgagggcttcctc
ttccgcaagctggacatcgagaccatgaagaagagctctaacagcagatcctgggtcaac
ctgtactgtgtgctgaacaaaggagagataggcttctataaggacgctaagaacaccgcc
acaccttacaacaacgagcccatgctcaacctcggccactgccactgcgacgtcaccctt
ggatacaagaagaagaaaaacgtctttacacttaaaacgaaagacggaagtgaatttctg
ttccatgcaaaggatgagtcacaggatgatctaaaggcctggaccaccaacatcaacaag
agcatcgcagagcatgtggagattgccaaatggggtcagccccagcctactacctcatcc
acggacgagggcacgcgccgggacggcagcaaggccgataacaagtcagagcggggggaa
aagtcagaccggggggaaaggccggagagggccgagcgctctgagaggtcggataagggt
gagaccaaatcggacaccaagcgttcagaaaagtccagcaagaagaaatga
DBGET
integrated database retrieval system
