Oncorhynchus kisutch (coho salmon): 109909359
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Entry
109909359 CDS
T09179
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109909359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109909359
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109909359
Intermediate filaments
Intermediate filament-binding proteins
109909359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
TMP_3
Motif
Other DBs
NCBI-GeneID:
109909359
NCBI-ProteinID:
XP_031651918
Ensembl:
ENSOKIG00005047055
LinkDB
All DBs
Position
LG18:40281560..40348950
Genome browser
AA seq
2716 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNTRLAGSSGHWETEVTSSKLFECSRIKALAEERDAVQKKT
FTKWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEMLPRPTRGRMRIHCLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTVILRFQIQVIKIECDDNRETRSAKDAL
LLWCQMKTAGYSEVHIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLIRSNATHNLQQAFN
IAEQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALRVEGKRVGKVLDNAIE
GQKMIDRYEALASELLEWIEKTIGIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEK
GNLEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRQELIRQEK
LELLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIG
VVVELAGEMETEGYYDIRRISARKENILGQWSLLKELVVGRKARLEKNLALQKTFQDMVY
MIDWMEDMQVQLLSKDFGKHLLEVDDLLQKHSLQEADITAQAERVQTLNSAALKFTTIEG
YQPCDPQVICNRVNHVSTCLEELKQLAAKRRSELEESQHLWAFFQEVEESEAWIREKSSI
LVTQTCGKDLSSVLRLLQKHKTLAGELLAHRSLLQQTMKKGKQILMEKSFGTGGIQERIM
EVKGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLLAWLQDAYRLVSSEDFGHDEYSTQ
SLLKKHRGVCEAVDKHRMHVVTLRKHMVALPLHYRELDEVQSRMGEAEQLYAEVAEVAVL
RQQWLHDALAVYLMFSEVNACEVWIDEKEQWLNKMEVPERLEDVEVIAHRFESLDQEMNS
LMGRILDVNQIVQQLLDSDHPSSTEVRGCQDHLNSRWNRIVEMVEQKKDHLDSVLRLQNY
LLECAEIKSQIQEKRKAIDATQYVGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQQEAE
ELAISHPAKAMEVLEHFEGISVEWEELKHTLQGCEDSLMVAGRLQQFIQDLDSFLTWLVH
TQTAAASDELPNALEEAERLINRHAALKEEIGRYEEDYERLQAVNELLEAEEAPLPYAAL
QQWLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPTT
VETVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERVDTLANRGNQN
RELAQQWLERLNGQWGLQRLLQDCHELGDWVAEKMLMARDTSRDETQKLHKKWLKHQAFM
AELSQNKEWLEKIEREGQQLIQEKPELSPVVRRKLGEIRECWQDLESTTQAKARQLFEAN
RADLLVQSYTSLDHRLHQLEGQLCYVDQGQDLTSVNKQLKKLQTMECQMEEWYKEVGELQ
VAAASIPQQGQVMETVGERQAAVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILW
VQERLPAATSQEHGSSLQAVQHLMKKNQTLQRELQGHRASVENVLERANVIASIRSPEAD
CVRAGLEQLSGLWGLLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKG
KDEPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDSEQISKCQSQMDRLYV
SLKDLVEERKSRLEQQYWLYQLNHEVDELEQWIAEREVVASSPELGQDFEHVTILQEKFT
EFASETGSLGQERVTAVNQMVDELIDYGHAEAATIAEWKDGVNEAWADLLELMETRAQML
AASHQLHKFFTDCREILAQIDDKQRRLPEVRACQGGTANTSTLQRLMHSFEHDIQLLVTQ
VRQLQESAGQLRTIYAGQKAEAIAGREQEVMHCWKELLTSCEECRVQITTATDKLRFFGV
VRDQIMWMDSIISQIGTGDNPRDVSSVEVLMNYHQSLKSEVEARSKSVLQCIEMGKTLLA
ARNPAAEEIKEKLDKVVAKQYELSEKWDKHWEVLQHMLEVHQFAQEAVVAEAWLTAQEPF
INSKELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKMKAEQSKLPPTPLLG
RKVFLDPQETSPARSQGSPLMRRIIYEQAEHRAERPSQEPLPSSVARRLGSTVANYTPIM
NGSSGYRSSLEAWAMPVMGGVVGGVVGVAAGLGTTAMEARGVAAGLGTAASEARGLAVGL
VTPAVEAKGIAASLVTGAATAVEVKASQYLRQPKIKHMDDMVTPMLVACRLEKVREKEVR
EREQRERERDIVLIEPAPVMPVMAEVVLQEMGREGMGRERLNSEPSSRDHRAGSSRSEPQ
QRDRDRDSRDSRDSHREARLERQHSSEVLMIQARRDELPQEVWRERAERKERKLERQTSS
EQEGHGHEGRRKDRHRTERQESSEHDTAKEQSDRRSTEKRSGGQTLFDIVEQLKDREAAT
ARGEVPKVPNGVPEKSSGRPDRPRARDRPKPRRRPRPKDHSAGEATTRRSRSAPEPGMAQ
SVSPSVLQPPSHTAHHEGFLFRKLDIETMKKSSNSRSWVNLYCVLNKGEIGFYKDAKNTA
TPYNNEPMLNLGHCHCDVTLGYKKKKNVFTLKTKDGSEFLFHAKDESQDDLKAWTTNINK
SIAEHVEIAKWGQPQPTTSSTDEGTRRDGSKADNKSERGEKSDRGERPERAERSERSDKG
ETKSDTKRSEKSSKKK
NT seq
8151 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccacagacctggacaacgcggaggcccaacgccagctcaacaacaac
aacacccgtctggccggcagctcgggacactgggaaactgaggtcaccagctccaagctg
tttgagtgttcccgcatcaaggccttggcagaagagagagatgctgtccagaagaagacc
ttcactaagtgggtgaactcccacctggcaagagtgtcctgtcgaatcgctgacctctat
aacgacctccgggacggctacatgctcaccaggctgctggaggtcctgtctggggagatg
ctgccgaggcccacgcggggtcgcatgcgtatccactgcctggagaacgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggagaacgtcggctctcacgacatcgtc
gacggcaaccaccgtctcacccttggcctcatctggaccgtcattcttcgcttccagatc
caggtgattaagattgagtgtgacgacaacagggagacgcggtcggcaaaggatgccctt
ctcctctggtgccagatgaaaactgctgggtactctgaggtccacatccagaacttcacc
acctgctggagagatggtctcgccttcaacgctctcattcaccgacacaggcctgatttg
attgaattccataagctgatccggtcaaatgccacacacaacctccagcaagccttcaac
atagctgagcagaacctggggctcaccaaactcctggaccctgaagacgtgaatacagag
aacccagatgagaagtcgataataacctatgttgtgtcctactaccattacttctccaag
atgaaagcccttcgagtagagggcaagagagtgggaaaggtgttggacaatgccattgag
ggtcagaagatgatcgatcgatatgaggccctggcctcggagctcctggagtggatcgag
aagaccataggcatcatcagcaaccagaagtttgccaactccttaacgggtgtccagcaa
cagcttcaagccttcaccacctactgcaccatcgagaagcccatcaagttccaggagaag
gggaacctggaagtgctcctctttactatccaaagcaagctcagagctaacaaccagaaa
ccatacgtgcctcatgaagggaaactcatctctgatatcaacaaggcgtgggagaggctg
gagaaggcggagcatgagagaggtgtggccctacgtcaggagctgattcgccaggagaag
ctggagctgctggctcagcggtttgaccacaagaccaccatgagacaggcgtggctcaac
gagaaccagcgcctcgtgtctcaggataactttggctacgacctgccagctgtggaggcc
gccatgaagaagcacgaggccattgaggcagacatctcgtcgtacgaggagcgcatcggg
gtggtggtggagctggctggggagatggagacggagggctactatgacatccggcgcatc
tcggcccgcaaggagaacatcctgggccagtggagcctgctgaaggagctggtggtgggg
aggaaggcccggttggagaagaacctggctctgcagaagaccttccaggacatggtctat
atgatcgactggatggaggacatgcaggtccagctcctgtccaaagacttcggcaagcat
ctgctggaggtggacgacctgctgcagaaacacagcctccaggaagctgacatcacagcg
caggcagagagggtgcagacccttaactcagccgctctcaaattcaccaccattgaaggc
taccagccctgtgacccccaggtgatctgcaaccgggtcaaccatgtcagcacctgcctg
gaggagctcaagcagctggcggccaagcggcgctcggagctggaggagtctcagcacctc
tgggccttcttccaggaggtggaggagtctgaggcctggatccgcgagaagagctccatc
ctggtcacccagacctgcggcaaggacctgagcagcgtgctgcggctgctccagaaacac
aagaccctggctggggagctgctggcccaccgctccctcctccaacagaccatgaagaag
ggtaagcagatcctgatggagaagagtttcggcacggggggcatccaggagcgcatcatg
gaggtgaaaggggagtggaagaggctggaggaccaggcggcgcagagactgggccacctg
caggaggcactcaatttcttccagttcagcacagagacggacgacctgctggcctggctg
caggacgcctaccgcctggtttccagcgaggactttggccacgatgagtactccacccag
tcactgctcaagaagcaccggggtgtgtgcgaggccgtggacaagcaccggatgcacgtg
gtaactctgcgcaaacacatggtggcgctgccactgcattaccgggagctggacgaggtg
cagtcgaggatgggcgaggcggagcagctgtacgccgaggtggccgaggtggccgtcctg
aggcagcagtggctgcacgacgcgctggccgtctacctcatgttcagcgaggtcaacgcc
tgcgaggtgtggatcgacgagaaggagcagtggctcaacaagatggaggttccagagagg
ctggaggacgtagaggtcatagcccacaggtttgagagcctggaccaggagatgaacagc
ctgatgggaaggatcctggacgtgaaccagatagtgcagcagctcctggacagtgatcac
cccagctcgacagaggtcagaggctgtcaggaccacctcaacagcagatggaaccgcatc
gtggagatggtggagcagaaaaaggatcacctggactctgtcctccgtctccagaactac
ctgctggagtgtgctgagatcaagtctcagatccaggagaagcgcaaggccatcgacgcc
actcagtacgtgggcagtgacctgggcggggtgctggccctgcagcgccgactctccacc
atggagggggccctggccgtgctggagcccaagctgcttcacctgcagcaggaggcagag
gagctggccatctcgcacccggccaaggccatggaggtcctggagcacttcgagggcatc
agtgtggagtgggaggagctgaagcacacgctgcagggctgcgaggactctctgatggtg
gcggggcggctgcagcagttcatccaggacctggactccttcctgacgtggctggtgcac
acgcagacggcggcagctagcgacgagctgcccaacgcgctggaggaggccgagaggctg
atcaaccgccacgcggcgctgaaggaggagatcgggaggtacgaggaggactacgagcgg
ctacaggcggtcaacgagctgctggaggccgaggaggctccgctgccatacgcggcgctg
cagcagtggctccagaagctggatgtgggctggaacaagctgctggagatgtgggagagc
cggagggaggtgctggtgcaggcgcacatcttccacctcttcctgagggacgtcaagcag
gccgaggccttcctcaacaaccaggagtcagccttggcccacgttgagctccccaccacg
gtggagacggtggaggctgccatcaagaagcacaaggacttcaccaccaccatggagctc
aacctgcatcgcatcaaggctgtcatcgaggccggagagagcctcattagccagagcaac
atctactcggaccgtatcagggagcgtgtggacaccctcgctaacagaggcaaccagaac
cgggaattggcccaacagtggctggagaggctcaacggccagtgggggctccagaggtta
ctacaggactgccacgagcttggagactgggtggcagagaagatgctcatggctcgtgac
acgtcccgcgatgagacgcagaagctgcacaagaagtggctgaagcaccaggccttcatg
gccgagctgtcccagaacaaggagtggctggagaagatcgagagggagggccagcagttg
atccaggagaagcccgagctgagcccggtggtgcggaggaagctgggggagatccgggag
tgttggcaggacctggagagcaccacccaggccaaggcccgccagctgtttgaagccaac
cgggccgacctgctggtgcagagttacaccagcctggaccatcggctgcaccagctggaa
ggacaactgtgctacgtggaccagggtcaggacctgacgagcgtcaacaagcagctcaag
aagctccagacgatggagtgtcagatggaggagtggtataaggaggtgggggagctgcag
gtggcggcggcctccatcccccagcagggccaggtcatggagacggtcggcgagcgccag
gccgccgtggagacgcgcatcgtccgcctcatcgagccgctcaaggagcgccggcgcatc
cttctggcctccaaggaggttcaccaagtgggccgggacctggaggacgagatactgtgg
gtgcaggagcgactgcctgccgccacgtctcaggagcacggctccagtctccaggctgtg
cagcacctcatgaagaaaaaccagactctgcagagggagctgcagggccatcgggcgagc
gtggagaacgtcctggaacgagctaatgtcatcgcctccatccgcagccccgaggctgac
tgtgtgcgggcgggcctggagcagctcagcgggctgtggggtctgctgtgggccgagaca
gagagaagacagctggtgctggatgccatgtaccaggcccagcagtactactttgacacg
gccgaggtggaggcctggctcagtgaacaggagctgcacatgatgaacgaggaaaagggc
aaggatgagcccagcaccctgcagctactgaagaagcacctggtactggagcagacgata
gaggactacgctgagacgataggccttctctcccagcagtgcagacagctactggagatg
ggacatccagacagtgagcagatcagtaagtgtcagtctcagatggaccggctgtacgtg
tctctgaaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctac
cagctcaaccatgaggtggatgagctggagcagtggatcgctgagagggaggtggtggcc
agctcgccagaactgggacaggactttgaacacgtcacgatcctgcaggagaagttcaca
gagtttgcgtcggagacgggcagtctgggtcaggagcgtgtgacggcggttaaccagatg
gtggatgagctgatcgactacggccacgccgaggccgccaccatcgccgagtggaaggac
ggcgtgaacgaggcctgggctgacctcctggagctcatggagacccgggcacagatgctg
gccgcctcgcaccagctccacaagttcttcaccgactgccgcgagatcttggcccagatc
gatgataagcaacggaggctgcccgaggtgcgggcgtgccagggtggcactgccaacacc
agcaccctgcagaggctcatgcacagcttcgagcacgacattcagctgctcgtcactcag
gtgaggcagctccaggagagtgcgggtcagctccggaccatctacgccgggcagaaggct
gaggcgattgccggccgggaacaggaagtgatgcattgctggaaggagctcttgacgtcc
tgtgaggagtgccgagtgcagatcaccacggcaacagacaagctgcggttcttcggggtg
gtgcgagaccagatcatgtggatggacagcatcatctctcagatcggcacaggggacaat
ccaagggatgtgtcctcagtggaggtactgatgaactaccaccagagcttgaagagcgag
gtggaggcgcgcagtaagagtgtgctgcagtgcatcgagatgggcaagacgctgctggcc
gcgcgcaaccccgctgctgaggagatcaaggagaagctggataaggtggtggccaagcag
tacgagctgtctgagaaatgggacaaacactgggaggtcctgcagcacatgctggaggtg
caccagtttgcccaggaagcggtggtggccgaggcctggctcacggcccaggagcccttc
atcaatagcaaggagctgggtgccagtgtggacgaggtggagcagctcatccgccgccac
gaggccttccgcaaggccgccgccacctgggaggagcgcttcagctcactacgacgcctc
accacggtggagaagatgaaagcagagcagagtaagctccctcccacccccctgctgggt
cgaaaggtgttcctggacccccaggagacgtcccctgcccggagccagggctccccactg
atgagacggatcatttacgagcaggccgagcacagagctgaaaggccctcccaggaaccc
ttgccctcctccgtggcccgccgcttgggatccaccgtggccaactacacccccatcatg
aacggctccagtggctaccgcagcagcctggaggcctgggccatgcctgtgatgggggga
gtggttggaggtgtagtgggggtggcagctggcctgggaacaaccgccatggaggccaga
ggggtagcagcagggttggggactgccgcctcggaagccagagggttggcagtaggattg
gtcacccccgcggtcgaggccaaagggatagctgcaagcttggtgactggtgcagccacg
gcagtggaggtgaaagcctcacagtacctccggcagcctaagatcaaacacatggacgac
atggtgacgcccatgctggtggcgtgtaggctggagaaggtgagagagaaggaggtgaga
gagagggagcagagagagagggagagagatattgtgttaatagagccagcgccggtgatg
ccggtgatggccgaggtggtgctccaggagatggggagggaggggatgggcagggagagg
ttgaacagtgagcccagcagcagagaccaccgggcggggagcagccggtcggagccccag
cagagagacagggacagagacagtagggacagtagggacagtcacagggaagccaggctg
gagcgccagcactctagtgaggtgctgatgattcaggcacggcgggatgagctgccccag
gaggtgtggcgggaacgggccgagcgcaaagagaggaagctggagaggcagacgtccagc
gagcaggaaggccacggacacgaaggccggaggaaagaccgccaccggacggagagacaa
gagtccagtgaacacgacacagccaaggagcagtcagacagacgttctacggagaaaagg
tcaggcggccagaccttgtttgacatagtggagcagctaaaagacagagaggcagcaacg
gcccgaggggaggtccctaaagtgccgaatggcgtgccagagaagtcttccggacgtcca
gaccggccgcgagcacgggaccgccccaagccccggcggagacccaggcccaaggaccac
tctgcaggagaggccaccacccggcggtcacgctcggcgccagagccagggatggcccag
agcgtgagcccctcagtcctccagccgccgagccacactgcccaccacgagggcttcctc
ttccgcaagctggacatcgagaccatgaagaagagctctaacagcagatcctgggtcaac
ctgtactgtgtgctgaacaaaggagagataggcttctataaggacgctaagaacaccgcc
acaccttacaacaacgagcccatgctcaacctcggccactgccactgcgacgtcaccctt
ggatacaagaagaagaaaaacgtctttacacttaaaacgaaagacggaagtgaatttctg
ttccatgcaaaggatgagtcacaggatgatctaaaggcctggaccaccaacatcaacaag
agcatcgcagagcatgtggagattgccaaatggggtcagccccagcctactacctcatcc
acggacgagggcacgcgccgggacggcagcaaggccgataacaagtcagagcggggggaa
aagtcagaccggggggaaaggccggagagggccgagcgctctgagaggtcggataagggt
gagaccaaatcggacaccaagcgttcagaaaagtccagcaagaagaaatga
DBGET
integrated database retrieval system
