Oncorhynchus kisutch (coho salmon): 109909378
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Entry
109909378 CDS
T09179
Name
(RefSeq) alpha-actinin-4 isoform X4
KO
K05699
actinin alpha 1/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04517
IgSF CAM signaling
oki04518
Integrin signaling
oki04519
Cadherin signaling
oki04520
Adherens junction
oki04530
Tight junction
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109909378
04518 Integrin signaling
109909378
04519 Cadherin signaling
109909378
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109909378
04520 Adherens junction
109909378
04530 Tight junction
109909378
09142 Cell motility
04810 Regulation of actin cytoskeleton
109909378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109909378
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109909378
04147 Exosome [BR:
oki04147
]
109909378
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109909378
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109909378
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109909378
Exosomal proteins of colorectal cancer cells
109909378
Exosomal proteins of bladder cancer cells
109909378
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
109909378
NCBI-ProteinID:
XP_020364027
Ensembl:
ENSOKIG00005017796
LinkDB
All DBs
Position
LG18:36463417..36510265
Genome browser
AA seq
902 aa
AA seq
DB search
MVDYHSSNNQASSGGPAVYMDPREQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGT
QIENIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDYIASKGVKLVSI
GAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFH
ISWKDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAEKYLDIPKMMDAEDIVGT
LRPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWI
RRTIPWLENRAPEKTMAEMQQKLEDFRGYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNR
PAFMPSEGRMVSDINGSWHNLEGAEKGYEEWMLNEIRRLERLDHLAEKFRQKATIHESWT
DGKEAMLTQKDYETASLSEVKALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSP
SVNARCQKICEQWDALGSLTQSRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAME
DLQDMFIVHNIEEIQGLITAHEQFKSTLPEANKEREAIQAIQAEVQKIAQYNGIKLSGGN
PYTTITPKSIDDKWHKVEQLVPQRDRALQEELAKQQSNDHLRRKFATQANIVGPWIQTKM
EEIGRISIEMNGTLEDQLVNLREYEQSIIEYKPNIDQLEGDHQLIQEALIFDNKYTAYTM
EHLRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRTSFNHFDKDHSGALMAEE
FKACLISLGYDVENNKAGDAEFARIMGIVDPNNSGAVTFQAFIDFMSRETTDTDTADQVI
ASFKILAADKNFITAEELRRELPPDQAEYCIARMAPYSGPDAKPGALDYMSFSTALYGES
DL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcactcttctaataatcaagcatcgtctggaggaccagccgtttacatg
gacccaagagaacaagaaaatgattgggaccgggacctgctgctggacccggcctgggag
aaacagcaaagaaagacgttcacggcctggtgcaactcccacctgaggaaagcaggcacg
cagatcgagaacatcgaggaggacttcagggatggcctcaaactcatgctcctgctggag
gtcatctcaggggagcggttacctaagcccgagagaggcaagatgagggtccacaagatc
aacaacgttaacaaagcgctggactacatcgccagcaagggggtcaagctggtgtccatt
ggcgcagaggaaattgtggatggcaacgccaagatgaccctgggcatgatctggacaatc
atcctccgcttcgccatccaggacatctccgtggaagagacctctgccaaggagggcctg
ctcctgtggtgccagaggaagactgcgccctacaaaaacgtcaacgtgcagaacttccac
atcagctggaaggatggccttgccttcaacgctctgatccacagacacaggccagagctc
attgactacgacaagctaaggaaggatgaccccttgaccaacctgaacaatgcctttgag
gtggctgagaagtacctggacatccccaagatgatggatgctgaagacatcgtgggcacg
ctgaggcctgacgagaaggccatcatgacctatgtctcctgcttctatcacgccttctct
ggcgcccagaaggctgagactgcagccaataggatttgcaaggtgctggctgtcaaccag
gagaatgagcacctgatggaggactacgagaagctggccagtgacctgttggagtggatc
cgccggaccatcccgtggctggagaaccgggctccagagaagaccatggccgagatgcag
cagaagctggaggacttccggggctaccgccgcgtccacaagccccccaaggtgcaggag
aagtgtcagctggagattaacttcaacaccctgcagaccaagctgaggctgagcaacagg
cccgccttcatgccctccgagggacgcatggtgtcggatatcaacgggtcgtggcacaac
ctggagggggcggagaagggctatgaggagtggatgctcaacgagatccgtcgcctggag
agactggaccacctggctgagaagttccgtcagaaagccaccatccacgagtcctggacc
gatggtaaggaggccatgctgacccagaaggactatgagacagccagcctgtcggaggtc
aaggctctgctgaggaaacatgaggcgtttgagtctgacctggccgcccaccaagaccgc
gtggagcagatcgctgccatcgcacaggaactcaatgagctggactactacgactcccct
agtgtgaacgcccgttgtcagaagatctgtgagcagtgggatgctctggggtctctcacc
cagagccgcagggagtctctggagaggacagagaagcagctggagtccattgacgagctg
tacctggagtacgccaagagggcggcacccttcaacaactggatggagggggccatggag
gacctgcaggacatgttcatcgttcacaacatcgaagagatccagggcctaatcacagcc
catgagcagttcaagtctaccctcccagaggccaacaaggagcgggaggccatccaggcc
attcaggccgaggtgcagaagattgcccagtacaacggcatcaagctgagcgggggcaac
ccctacaccaccatcacacccaagagtatcgacgacaagtggcacaaggtggaacagctg
gtgccccagcgtgaccgggccctgcaggaggagctggccaagcagcagtctaacgaccac
ctgcgccgcaagtttgccacccaggccaacatcgtcgggccctggatacagaccaaaatg
gaggagattgggcggatatccattgagatgaatggaactctggaggaccagctggtgaac
ctgagagagtatgagcagagcatcatagagtacaagcccaacatcgaccagctggaggga
gaccatcagctcatccaggaggccctcatcttcgacaacaaatacaccgcctacaccatg
gagcacctgcgggtgggctgggagcagctcctcaccaccatcgcccgcaccatcaacgag
atcgagaaccagatcctgacccgcgacgccaagggcatcagccaggagcagctgcatgag
taccgcacttccttcaaccactttgacaaggaccacagcggggccctgatggctgaggag
ttcaaggcgtgcctgatcagcctgggctacgatgtggagaataacaaagcgggcgatgcc
gagtttgcccgcatcatgggcatagtggaccccaacaacagcggagctgtcaccttccag
gccttcatagacttcatgtcccgggagaccacggacaccgacacagccgaccaggtcatc
gcctccttcaagatcttggctgcagacaagaacttcatcacggctgaggagctgaggcgt
gagctgcctccagatcaggcagagtactgcatcgcccgcatggcgccctactcgggccct
gacgcgaagcccggtgctctcgactacatgtccttctctaccgccctctacggggagagt
gacctctag
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integrated database retrieval system