KEGG   Oncorhynchus kisutch (coho salmon): 109909378
Entry
109909378         CDS       T09179                                 
Name
(RefSeq) alpha-actinin-4 isoform X4
  KO
K05699  actinin alpha 1/4
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04510  Focal adhesion
oki04517  IgSF CAM signaling
oki04518  Integrin signaling
oki04519  Cadherin signaling
oki04520  Adherens junction
oki04530  Tight junction
oki04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    109909378
   04518 Integrin signaling
    109909378
   04519 Cadherin signaling
    109909378
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109909378
   04520 Adherens junction
    109909378
   04530 Tight junction
    109909378
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    109909378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109909378
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oki04812]
    109909378
   04147 Exosome [BR:oki04147]
    109909378
Membrane trafficking [BR:oki04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    109909378
Cytoskeleton proteins [BR:oki04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     109909378
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109909378
  Exosomal proteins of colorectal cancer cells
   109909378
  Exosomal proteins of bladder cancer cells
   109909378
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8
Other DBs
NCBI-GeneID: 109909378
NCBI-ProteinID: XP_020364027
Ensembl: ENSOKIG00005017796
LinkDB
Position
LG18:36463417..36510265
AA seq 902 aa
MVDYHSSNNQASSGGPAVYMDPREQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGT
QIENIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDYIASKGVKLVSI
GAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFH
ISWKDGLAFNALIHRHRPELIDYDKLRKDDPLTNLNNAFEVAEKYLDIPKMMDAEDIVGT
LRPDEKAIMTYVSCFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWI
RRTIPWLENRAPEKTMAEMQQKLEDFRGYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNR
PAFMPSEGRMVSDINGSWHNLEGAEKGYEEWMLNEIRRLERLDHLAEKFRQKATIHESWT
DGKEAMLTQKDYETASLSEVKALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSP
SVNARCQKICEQWDALGSLTQSRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAME
DLQDMFIVHNIEEIQGLITAHEQFKSTLPEANKEREAIQAIQAEVQKIAQYNGIKLSGGN
PYTTITPKSIDDKWHKVEQLVPQRDRALQEELAKQQSNDHLRRKFATQANIVGPWIQTKM
EEIGRISIEMNGTLEDQLVNLREYEQSIIEYKPNIDQLEGDHQLIQEALIFDNKYTAYTM
EHLRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRTSFNHFDKDHSGALMAEE
FKACLISLGYDVENNKAGDAEFARIMGIVDPNNSGAVTFQAFIDFMSRETTDTDTADQVI
ASFKILAADKNFITAEELRRELPPDQAEYCIARMAPYSGPDAKPGALDYMSFSTALYGES
DL
NT seq 2709 nt   +upstreamnt  +downstreamnt
atggtagattatcactcttctaataatcaagcatcgtctggaggaccagccgtttacatg
gacccaagagaacaagaaaatgattgggaccgggacctgctgctggacccggcctgggag
aaacagcaaagaaagacgttcacggcctggtgcaactcccacctgaggaaagcaggcacg
cagatcgagaacatcgaggaggacttcagggatggcctcaaactcatgctcctgctggag
gtcatctcaggggagcggttacctaagcccgagagaggcaagatgagggtccacaagatc
aacaacgttaacaaagcgctggactacatcgccagcaagggggtcaagctggtgtccatt
ggcgcagaggaaattgtggatggcaacgccaagatgaccctgggcatgatctggacaatc
atcctccgcttcgccatccaggacatctccgtggaagagacctctgccaaggagggcctg
ctcctgtggtgccagaggaagactgcgccctacaaaaacgtcaacgtgcagaacttccac
atcagctggaaggatggccttgccttcaacgctctgatccacagacacaggccagagctc
attgactacgacaagctaaggaaggatgaccccttgaccaacctgaacaatgcctttgag
gtggctgagaagtacctggacatccccaagatgatggatgctgaagacatcgtgggcacg
ctgaggcctgacgagaaggccatcatgacctatgtctcctgcttctatcacgccttctct
ggcgcccagaaggctgagactgcagccaataggatttgcaaggtgctggctgtcaaccag
gagaatgagcacctgatggaggactacgagaagctggccagtgacctgttggagtggatc
cgccggaccatcccgtggctggagaaccgggctccagagaagaccatggccgagatgcag
cagaagctggaggacttccggggctaccgccgcgtccacaagccccccaaggtgcaggag
aagtgtcagctggagattaacttcaacaccctgcagaccaagctgaggctgagcaacagg
cccgccttcatgccctccgagggacgcatggtgtcggatatcaacgggtcgtggcacaac
ctggagggggcggagaagggctatgaggagtggatgctcaacgagatccgtcgcctggag
agactggaccacctggctgagaagttccgtcagaaagccaccatccacgagtcctggacc
gatggtaaggaggccatgctgacccagaaggactatgagacagccagcctgtcggaggtc
aaggctctgctgaggaaacatgaggcgtttgagtctgacctggccgcccaccaagaccgc
gtggagcagatcgctgccatcgcacaggaactcaatgagctggactactacgactcccct
agtgtgaacgcccgttgtcagaagatctgtgagcagtgggatgctctggggtctctcacc
cagagccgcagggagtctctggagaggacagagaagcagctggagtccattgacgagctg
tacctggagtacgccaagagggcggcacccttcaacaactggatggagggggccatggag
gacctgcaggacatgttcatcgttcacaacatcgaagagatccagggcctaatcacagcc
catgagcagttcaagtctaccctcccagaggccaacaaggagcgggaggccatccaggcc
attcaggccgaggtgcagaagattgcccagtacaacggcatcaagctgagcgggggcaac
ccctacaccaccatcacacccaagagtatcgacgacaagtggcacaaggtggaacagctg
gtgccccagcgtgaccgggccctgcaggaggagctggccaagcagcagtctaacgaccac
ctgcgccgcaagtttgccacccaggccaacatcgtcgggccctggatacagaccaaaatg
gaggagattgggcggatatccattgagatgaatggaactctggaggaccagctggtgaac
ctgagagagtatgagcagagcatcatagagtacaagcccaacatcgaccagctggaggga
gaccatcagctcatccaggaggccctcatcttcgacaacaaatacaccgcctacaccatg
gagcacctgcgggtgggctgggagcagctcctcaccaccatcgcccgcaccatcaacgag
atcgagaaccagatcctgacccgcgacgccaagggcatcagccaggagcagctgcatgag
taccgcacttccttcaaccactttgacaaggaccacagcggggccctgatggctgaggag
ttcaaggcgtgcctgatcagcctgggctacgatgtggagaataacaaagcgggcgatgcc
gagtttgcccgcatcatgggcatagtggaccccaacaacagcggagctgtcaccttccag
gccttcatagacttcatgtcccgggagaccacggacaccgacacagccgaccaggtcatc
gcctccttcaagatcttggctgcagacaagaacttcatcacggctgaggagctgaggcgt
gagctgcctccagatcaggcagagtactgcatcgcccgcatggcgccctactcgggccct
gacgcgaagcccggtgctctcgactacatgtccttctctaccgccctctacggggagagt
gacctctag

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