Oncorhynchus kisutch (coho salmon): 109909454
Help
Entry
109909454 CDS
T09179
Name
(RefSeq) interferon-induced GTP-binding protein Mx3-like isoform X1
KO
K14754
interferon-induced GTP-binding protein Mx
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109909454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
AAA_16
URGCP_GTPase
AAA_21
PsbQ
AAA_29
AAA_15
Motif
Other DBs
NCBI-GeneID:
109909454
NCBI-ProteinID:
XP_031652815
Ensembl:
ENSOKIG00005020697
LinkDB
All DBs
Position
LG18:24556276..24576788
Genome browser
AA seq
640 aa
AA seq
DB search
MHRPDAGSEDEERDGMQRGVFYSHLDRHVRPFIELIDFLRSIGIEKDLALPAIAVVGDQS
SGKSSVLEALSGVALPRGSGIVTRCPLELKLRKCFGGKWKAKISYQGVVETFEDPSLVEI
HVKTAQNTLAGDGVGICEDLITLEITSPDVCDLTLIDLPGITRVPVTGQPEDIGDQIRRL
ILKFIKKQETINLVVVPCNVDIATTEALRMAQSVDPEGARTLAILTKPDLVDKGAEPDIL
KIVNGQVVHLNKGYIIVKCRGQNDINQKISLADATRLEMEFFKNHHHFSPLLEQNKVTTQ
CLATKLTQDLVDHIKTSLPYLTDQIREHLETVKTELKKYSTGPPLERKKMGPYLTERLID
FIEKINELCRIGNSSEKNLHTCLRPVFQQWDIYLSNTKGSFLNKVAAMIKNYDKEHRGRE
LITFSDYCVYEHAVQKHILGLQEPALDVLKAIRGMVQAEFRDVCEACFKSYPQLRSMALT
KIDEIQTKQETKVEKRIKEYINMERLVYTQDSIFIKGLKDHKAQFKEAIEEERFYDPEEI
EDITATFNSTTFDSRKLTPDKLGVYYEIVYQRLADYVPMLILQFMLKESAKMLCIQIMDQ
RDGADVVKMLSEDSMEGRRRADLHQRLDRLKKAQEKLSEF
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaccagatgcaggttctgaggatgaggaaagagatggtatgcaaaggggggta
ttctacagccatttggatagacacgtgcgaccattcatcgaactcattgactttctgaga
tcgatcggaatcgagaaggacttggcattgccagccattgctgtggttggagaccagagc
tcagggaagagctcagtgcttgaggctttatctggggtggcactaccaagaggaagtggt
attgtcaccaggtgtccattggaattgaaactaaggaagtgttttggaggaaaatggaag
gcaaagatcagctatcaaggggtagtggagacttttgaggacccatcattggttgagatt
catgtcaaaactgctcaaaatactctagccggagatggtgttgggatctgtgaagacctg
atcacgctggagatcacttctcctgatgtatgtgacctcacacttattgatctacctggg
attaccagagtacctgtcacaggccaaccagaggatattggtgatcagatcagacgtctt
attttgaagtttattaagaaacaagagaccattaacctggttgtagtgccatgcaatgtt
gacatagcaacaactgaagcattgagaatggcacaatcagtggatccagaaggtgcaagg
acactggcaattctgaccaagccagacttggttgacaaaggggcagaaccagacatctta
aaaattgttaatggccaagttgttcacctgaacaagggctacatcatcgtaaaatgccgt
ggccagaatgatatcaaccagaagatctctttggcggacgccactcgactggaaatggaa
ttcttcaaaaaccaccaccactttagtccacttcttgagcaaaacaaagttacaacacaa
tgccttgccactaagctcacacaagacctggtagatcatataaagacatcacttccatac
ttgacagaccaaatcagagagcatcttgagactgttaaaacagaactgaagaagtatagc
actggtcctccactggaacgtaaaaagatggggccctatctgacggagagactaattgat
ttcattgagaagattaatgaactgtgcagaattgggaactcaagtgagaagaatctgcat
acttgcctacgtcctgtattccaacagtgggatatttatctcagtaacaccaaaggatca
ttcctcaacaaagtggcagccatgataaaaaactatgataaagaacatcgtgggagagag
ctgataactttcagtgactattgtgtatatgaacatgcagttcaaaagcacatccttgga
cttcaagagccggccttggatgtcctgaaagccattcgaggtatggtacaagcagagttt
agagatgtgtgtgaagcttgtttcaaaagctatcctcagctcagatccatggctttgact
aagattgacgaaatccagactaaacaggaaaccaaagttgagaagagaatcaaagaatac
atcaatatggagcgattggtgtacactcaggacagtattttcatcaagggcttgaaggat
cataaagctcagttcaaagaagctattgaggaagagcgtttttatgacccagaggaaatt
gaggacatcactgctacattcaacagtacaacatttgatagcaggaagctgaccccagat
aaacttggggtctactatgagattgtctaccagcgcctggcagactacgtgcccatgctg
atcctgcaattcatgcttaaggagtcagccaagatgctttgtatccagattatggatcag
agagacggagctgatgttgtcaaaatgctgagcgaagactctatggaaggccgcaggaga
gcagacctgcatcaacgcctggaccgcctgaaaaaggcccaggaaaaacttagtgagttt
tag
DBGET
integrated database retrieval system
