Oncorhynchus kisutch (coho salmon): 109909501
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Entry
109909501 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109909501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109909501
Membrane trafficking [BR:
oki04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
109909501
Endosome - Golgi transport
Arf GTPase associated proteins
109909501
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
109909501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
RA
SAM_1
SAM_2
PH_6
PH_11
SOS1_NGEF_PH
PH_13
PH_8
Motif
Other DBs
NCBI-GeneID:
109909501
NCBI-ProteinID:
XP_031647304
LinkDB
All DBs
Position
LG15:81045601..81116118
Genome browser
AA seq
1529 aa
AA seq
DB search
MSEAEGCVSVWEWLCALHLDQYFPVFQDAGFGTLLECQGLTQDQLETIGIKLPGHRKRIL
VSLQKTHHHTHPEREHDALLTHLAAEGDQREEERAVFRPSPLRRETPLPAQRPVSRGERP
VPKERSVFREKERDGERPRPIPKERTKYRSVPVETLDCGQTSPHPNPTFCPTTPNPNSTS
YSTAPHSTAQDPPLPPIPPRSTPNGPPLRFTPTSPKHSPMAPKPRHKHNNTQSSTNTQTT
PLHQSPHSTPSLASPPIPSLYHSLASPPIPSLYHSLASPPIPTVPLPSLSTNPPTVPLPS
LSTNTPTVPLPSLSTNPPTVPLPSLSTNPRTVPLPSLSTSPVSPARHPQQVGEGGRKPSP
VSPARHPQQVGEGGRKPSPVSPARHPQQVGEGGRKPSPVSPSSSSSSFSVEQYDQSSSSD
QCVPTLPPKVYVVGACPKEPRGPAPIPRRPPVLPPRTTPTHSDVPVNEPHTERTPPPPPR
TRVHNTPVDTQPTLPMRRVPQPPPEIRSDFGDSSDDSEDPDQVYPKPQSVNMADRDVFLP
VPGWGKGRYSSLCSDDELLDDDNEPISNRQSSWQDYGLSTLQESVYLPVTGRVLAQPPRD
GPSPVLKMGWLDKNPPQGSLYYQRRWVKLDVDYLRYFDNDKEVYSKRIIPTAAITGVTNV
GEQKFEVVTTNRTFLFRAESDFERNEWVSVLQNFTRGCQEGSKEITSSVPHSSMTPGSPL
TPEQQGYLELRGLRSKLYTVVSGDKVFLYKNMEDYRLGIGITSIDMNVGNVKDTDRRSFD
LTTPYRIFSFLADSEQHKDQWVEAMREAIGEALSNSEVANKIWAEPSNGCCADCGAAKPE
WAAINLCVVVCKRCAGEHRGLGPSISKVRSLKMDRRVWTEELIQVFLLLGNERLNRFWAA
NVPPSEALSPTSCSEDRRRFVSSKYRQGKYRKYHPLYGNQEELNNYLSPPVSSPSSIQPL
QYLSPSNLMSVFCGADVNCSTGQADCPSPLSLALAHNQKLQAQFLSHNLNTELPRSEVTG
VMEPQHYSPQHPVTHNGFLFKTASMARPITERKAREESVCVCFRSDIEGIYRKSGVNSRV
AALCEAFRRDARSVRLKEGEHQVDDVSNHTERFFRESGEGLFTILAASAWLSTPVIPEES
RKICQYQLLLSQLPRVNKATLRALVNHLYCVQRFAELNQMNLHNLAIVFGPTLFQSDGKD
YTAGLVVEELIEHYTDVFEVDELQLKRQLDEITAIIKVREKLNHNSSVPASGSAGDFICT
VYLEEKKETTEQHVKIPGSMTAAELTCEILDRRKIQVRDKDYWSCWEVSQKEETERPLHH
LERVLPIIHSLGTDSHLLVKKHLAMEAIRIYLASKVDVSKHGMVKFREERSILGLGLNTG
SFHDRYFILSTASLRMYKEVRSNRPEREWQVKNLRVYLGIKKKLRPPTCWGLTLINGSEK
QEKPERQQWYLCCDTQTEMREWFSTFLTIQYDGNVWPADAVQTRVTRALPADTRHGNVAL
IPLRGSENEMRNSVAAFTADPLGGIDHQP
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggaggggtgtgtgtcggtgtgggagtggctgtgtgctctgcatctggac
cagtatttcccagtgttccaggacgcggggtttggaacgttgttggaatgccaagggctg
acccaggatcagctggagacgattggaatcaaactgcctgggcaccgcaaacgcatccta
gtcagcctgcaaaaaacacaccaccacacacaccccgagagagagcacgatgccctactc
acacatctggctgcagagggagaccagagagaggaagagagagctgtgttcagacccagt
cctttgaggagagagacaccactacctgcacagagaccagtatccagaggagagagacca
gtccctaaggagagatcagtgttcagggaaaaagagagggatggagagagaccgagacca
atccccaaggagaggactaagtaccggtctgtccctgtagagacattggactgtggccag
acttccccccatcccaaccctaccttctgccctaccacccccaatcccaactctacctcc
tactctaccgccccccattctactgcccaagacccccccttaccccccatcccccctcgc
agcaccccaaacggccccccactacgcttcacccccacctcccctaaacactcccccatg
gcacccaaacccagacataaacataacaatacacagtcctctacaaacactcagaccaca
cctctccaccaatccccccacagtaccccctccctagcctctccaccaatcccctcactg
taccactccctagcctctccaccaatcccctcactgtaccactccctagcctctccacca
atccccacagtacctctccctagcctctccaccaatccccccacagtacctctccctagc
ctctccaccaatacccccacagtacctctccctagcctctccaccaatccccccacagta
cctctccctagcctctccaccaatccccgcacagtacctctccctagcctctctacctct
cctgtttcaccagccagacacccccagcaggtgggggagggagggagaaagccctctcct
gtttcaccagccagacacccccagcaggtgggggagggggggagaaagccctctcctgtt
tcaccagccagacacccccagcaggtgggggagggagggagaaagccctctcctgtttcg
ccctcttcctcctcctcttccttctcagttgaacaatatgaccagtcttcctcttctgat
caatgcgtgcccaccctcccccctaaagtctacgtggtgggggcgtgccctaaagagcct
cgcggccctgctccaatcccacgtcgacctcctgttttgccccccagaaccacacccaca
catagcgatgttccagtcaatgagccgcacacagagcgaactccaccccccccgcctcgg
accagggtacacaacacaccagtcgacacgcagcctactctgccaatgagaagagtcccc
cagccaccgcctgaaatcaggtcagattttggtgacagttcagatgactctgaggatcca
gaccaagtttaccccaagccccagtctgtgaacatggcagacagggatgtgttcctgccg
gtgccggggtgggggaaggggcggtacagctctctctgcagtgacgatgaactattggac
gatgacaacgagccaatcagcaaccgtcagagctcatggcaggactatggtctgagtacg
ctacaggagagtgtctacctgccggtcacaggcagggtcctagcccagccccctagagat
ggcccctcccctgttctaaagatgggctggctggataagaacccaccgcaggggtctctg
tactaccagaggagatgggtgaagctggatgttgactacctgagatactttgacaacgac
aaggaggtatactctaagaggatcataccaacggctgccattacgggggtgaccaacgtg
ggggagcagaaatttgaggtggtcacaaccaaccggacctttctcttcagagccgagagc
gactttgagaggaatgagtgggtgtcagttctgcagaacttcactagggggtgccaggag
ggcagcaaggagattacttcatcggtcccacactcctcgatgacccctggttcacccctg
acccctgaacagcagggctacttggagctgaggggcctgcgctccaaactctacacagtc
gtctccggagacaaggtcttcctctacaagaacatggaggactaccgtcttggcatcggc
atcacgtctatcgacatgaacgtaggaaacgtgaaagacactgaccgccgcagctttgat
ctgacaacaccctaccgcatcttcagttttctagcggattcagaacaacataaagaccag
tgggtagaagcgatgcgtgaagcgattggagaggctctgtccaatagcgaggtggctaat
aaaatctgggcggagcctagcaatggttgctgtgccgactgtggcgccgccaaacctgag
tgggctgccatcaacctgtgtgtggtggtctgcaaacgctgtgcaggagagcaccgcggt
ttgggccccagcatctctaaggtgcgcagtctgaagatggacaggagggtgtggacagag
gagcttatacaggtgttcctgttgctaggtaatgagcgtctgaacagattttgggcggcg
aacgtccctcccagcgaggcgctgagtccgaccagttgtagcgaagaccgccgacgattc
gtcagctccaaatacagacagggaaaataccgcaaataccaccccctctacggcaaccag
gaagagcttaacaactatctatcccctccagtatccagcccctccagtatccagcccctc
cagtatctatccccctccaaccttatgtctgtgttctgtggagctgatgtgaactgttct
actggccaggctgactgtccctcccctctctccctggcactcgcccacaaccagaaacta
caggcccagttcctctcacacaacctcaacacagagctgcctcggtcggaggtgactggg
gtcatggagcctcaacactattcaccacagcaccccgtcactcacaatggcttccttttc
aagaccgcctccatggcccggcctatcacggagcgtaaggccagggaggaatctgtgtgt
gtgtgttttaggtctgacatcgagggtatctaccgtaagagcggtgtgaacagtcgcgtg
gcggcgctgtgcgaggcatttcgacgtgatgcccgtagcgtgcgtctgaaggagggtgag
caccaggtggacgacgtgtctaaccacactgaacgcttcttcagagagtctggagaggga
ctgttcaccatactggctgctagcgcatggctcagcacacctgtgatcccagaggagagc
agaaagatctgtcagtaccagctgctgctgagccagctgcccagagtcaacaaggccacg
ctacgagccctggtcaaccacctctactgtgtgcagcggtttgcagagctgaaccagatg
aatctccataacctggctatagtatttggcccaacactgttccagagcgacgggaaggac
tacaccgctggcctcgtcgtagaggaactcatagagcactacacggacgtctttgaggtg
gatgagctgcagctgaaaagacagctggatgagatcacggccatcattaaagtcagagag
aagttgaaccacaactccagcgtccctgcgtcggggtcagcaggtgacttcatctgtaca
gtgtacctggaggagaagaaggagacgacagagcagcatgtcaagatccctggttctatg
acggcagcagagctgacctgtgagattctggaccggcggaagatccaggtcagagacaaa
gactactggagctgctgggaggtcagccagaaggaggagaccgagcgtccattgcatcat
ctggagcgtgtgttacccatcatccattctctgggtaccgactcccacttgctggtcaaa
aaacatctcgccatggaggccatacgcatctacctggccagtaaagtggatgtgtccaag
cacgggatggtgaagttccgggaggagaggagcattctgggattgggactgaataccggc
agcttccacgaccgctacttcatcctgagcactgcctccctcaggatgtacaaggaagtg
cggagtaatcgtccagagagggaatggcaggtgaagaacctgagggtctatctaggcatc
aagaagaaactacgaccacccacctgttggggtctgactctgatcaatggaagtgaaaaa
caggagaagccagagaggcagcaatggtatctgtgttgtgacactcagacagagatgagg
gagtggttctccaccttcctcactatccagtatgatgggaacgtgtggccagcggatgca
gtacaaacacgtgtgacccgtgcgttgccggcggatactcgtcatggtaatgtggcgttg
attccgttgcgcggcagcgaaaatgagatgcggaacagcgttgcagctttcaccgccgac
ccgcttggtgggatagaccaccagccgtag
DBGET
integrated database retrieval system
