Oncorhynchus kisutch (coho salmon): 109909591
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Entry
109909591 CDS
T09179
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109909591
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109909591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
109909591
NCBI-ProteinID:
XP_031651910
Ensembl:
ENSOKIG00005046948
LinkDB
All DBs
Position
LG18:40060590..40134384
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AA seq
523 aa
AA seq
DB search
MMAGGAVQQNGIFLNPHHHNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGVAFLQPLF
ETEGIVFPHQESHSEAHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS
KDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSTQKSEPVSVMQPQTTVNPDRIK
QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK
AVEIIVQKIQEDPQSSSCLNISYSNISGPVANSNPTGSPYANSAEVNPAAAAAAAATASS
LLGQATMQSMGGFPTTMGPSFSGNDLLTITSALNTLASYGYNTNSLGLGLNPAAASGVLA
AVAASANPAAAAAANLLASYASDASTSAGHQAASLGGFTLGSLAAATGATNGYLSASSPL
MAQSLMATEKQMQEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFI
PGTRNRKVTITGSPASTQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggcggggcagtacaacaaaacgggattttcttgaatcctcaccatcacaat
caacagccgcacatggagtcggatccccctgattcgcgtaaaaggccactggagacccca
accgaggctagcagcactaaacgcacaaacacgggagtggccttcctgcaaccccttttt
gaaactgaaggcattgtattccctcaccaggaatcacactctgaggcacatgaggaaggt
gagtacttcctgaaggtgctgatccccagctatgcggccggctccatcattggcaaggga
ggacagaccatcgtccagctgcagaaagagaccggcgccaccatcaaactgtccaaatcc
aaagacttctaccctggcacgacagagcgggtgtgtctgatccaggggacagtggaggct
ctgaatggagtccataacttcatcgctgagaaggtgcgggagatgccacaaagcacccag
aaatccgaaccggtcagcgtaatgcagccacagaccaccgtcaaccctgaccgcatcaaa
caggccaagctgatagtaccaaacagcacagcaggtctgatcattggtaaaggtggagcc
acagtcaaggccgtcatggagcagtcaggcgcctgggtgcagctctcccaaaaaccagag
ggcatcaacctgcaggagcgcgtggtcaccattagcggagagcccgagcagaaccgtaaa
gccgtggagatcattgttcagaagatccaggaggacccccagagcagcagctgcctcaac
atcagctactccaacatctctggccctgtggccaactccaaccccaccggctccccctac
gccaactcagccgaggtgaaccccgctgctgctgctgccgccgctgccacagcctccagc
ctcctgggtcaggccaccatgcagagtatgggcggcttccccaccaccatgggtcccagc
ttctcaggcaacgacctcctgaccatcacctcggccctcaacacgttagccagctacggc
tacaacaccaactccctgggcctggggctcaaccccgcggcagcctcaggagtcctggcc
gccgtagcggctagcgctaaccccgccgcggctgccgctgcaaacctcctggcatcctac
gccagcgatgcctccaccagcgcaggccaccaggccgcctccctgggaggcttcaccctg
ggctcgctggccgcggccactggggccaccaacggctacctgagcgcctcatccccgctg
atggcacaatccctgatggccactgagaagcagatgcaggagggggccaaggaagtggtg
gagatcgctgttcccgaaaacctggtaggagccatcttggggaaaggagggaaaacgcta
gtggagtaccaggagctgactggagcccggatccagatctccaaaaagggagagttcatt
cccggcacccggaaccgtaaagttaccataaccggctctccggcgtcaacgcaggcagct
cagtatctgatcagccaacggatcacgtatgagcagggtgtgcgcgccaccaacccacag
aaggtgggctag
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