Oncorhynchus kisutch (coho salmon): 109909598
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Entry
109909598 CDS
T09179
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03271
Virion - Rotavirus
oki04145
Phagocytosis
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04514
Cell adhesion molecule (CAM) interaction
oki04517
IgSF CAM signaling
oki04518
Integrin signaling
oki04530
Tight junction
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
oki05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
109909598
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109909598
04514 Cell adhesion molecule (CAM) interaction
109909598
04517 IgSF CAM signaling
109909598
04518 Integrin signaling
109909598
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109909598
09144 Cellular community - eukaryotes
04510 Focal adhesion
109909598
04530 Tight junction
109909598
09142 Cell motility
04820 Cytoskeleton in muscle cells
109909598
04810 Regulation of actin cytoskeleton
109909598
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109909598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109909598
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109909598
04515 Cell adhesion molecules [BR:
oki04515
]
109909598
04090 CD molecules [BR:
oki04090
]
109909598
Membrane trafficking [BR:
oki04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
109909598
Exosome [BR:
oki04147
]
Exosomal proteins
Proteins found in most exosomes
109909598
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin beta subunits
109909598
CD molecules [BR:
oki04090
]
Proteins
109909598
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
109909598
NCBI-ProteinID:
XP_031652240
Ensembl:
ENSOKIG00005041004
LinkDB
All DBs
Position
LG18:complement(58008029..58051244)
Genome browser
AA seq
797 aa
AA seq
DB search
MDLKLLLISTLLGVICYSSAQQEGNECIKANAKSCGECIQVGAKCGWCMDHGFLKQGEAT
STRCDELGSLRKRGCSSTKVENPRGSQRVLKNKAVTNRNKGEGKLRPEDITQVQPQKLTL
SLRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTHLMLEMSKITTDFK
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQEFNTLVGQQHI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAITEEFQPVYKELKNLIPKSAVGILS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIMYQSRCKNGVTGEGEMGRKCSNISIG
DDVSFTISITAKQCPKMGKPETIKIKPLGFNEEVEITLNFICECDCHKDGIENSDICHNG
NGTYECGACRCNEGRIGRQCECSTNEVTSEDLDKSCRKDNGTDICSNNGDCVCGTCECKK
RENPEERYSGMFCECDNFNCDRSNNKLCGGHGHCECRVCICDANWTGSACDCSLDTTTCL
ASNKQICNGRGTCECGTCKCTNPKFQGPSCEICPTCPGVCAEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRDKLPQPGQAFPLMHCKERDANDCWFYYTYAVNKTEKEVHVVETL
DCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENP
IYKSAVTTVVNPKYEGK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaactacttctgatttcaacgttgttaggagtcatttgttacagcagtgct
cagcaagaagggaacgagtgcatcaaggctaatgccaaatcctgtggggagtgtattcaa
gtgggagcgaaatgtggctggtgcatggaccacgggttcctgaagcagggtgaggccaca
tcgacccgctgtgacgagctggggtccctgaggaagagaggttgtagctccaccaaggta
gagaacccccgaggcagccaacgggtcctgaagaacaaggctgttaccaaccgcaacaag
ggagaaggaaaactccgaccagaggacatcacacaggtccagccacagaaactcaccctc
agcctcagatctggtgaaccccagtcttttaacctgaagttcaaacgggccgaggattac
cccattgacctctactacctgatggacctgtcctactccatgaaggacgatctggaaaac
gtcaagaacctgggaacacatctgatgctggagatgtcaaagatcacaactgattttaaa
atcggttttggttcctttgtagaaaagacagtgatgccttacattagcaccaccccagcc
aagctgctgaacccctgtactggggaccagaactgcaccagtcccttcagctacaagaac
gtcctgaagctgaccagcaatggacaggagttcaataccctggtgggacaacagcatatc
tctggaaacctggactcaccagagggaggcttcgatgccatcatgcaagtggctgtgtgt
ggtgagcacattggctggaggaacgtcacccgtctgctggtgttctccactgacgctggc
ttccactttgctggagacgggaaactgggagggatagttttgcccaacgatgggaaatgt
cacctggagaacaacatgtacacaatgagccactactatgactacccctccatcgctcac
ctggttcagaaacttagcgacaacaacatccagacgatctttgccatcacagaggagttc
cagcctgtttacaaggagttaaagaatctcattcctaaatctgcagtggggatactctct
gctaactccagcaatgttatcaacctcattattgatgcctacaattctctttcctcagag
gtgattctggagaacagcaagctaccagagggagtgaccataatgtatcagtcacgctgc
aagaacggagtgactggtgagggagagatgggaagaaaatgctccaatatctcaatcggt
gacgacgtgtctttcaccataagcatcacagctaagcagtgtcctaaaatgggcaaacca
gagaccatcaagatcaaacccctagggttcaatgaggaggtggagatcactctgaacttc
atctgcgagtgtgactgtcacaaagatggcattgagaacagtgacatctgccacaacggc
aacgggacatatgaatgtggagcctgcaggtgcaatgagggccgtattggtagacagtgt
gagtgcagcaccaacgaggtgaccagcgaagacctggataagagctgccgtaaagacaac
ggtacagacatctgcagcaacaacggagactgtgtgtgtggaacctgtgagtgcaagaag
agagagaacccagaggagcgctacagcgggatgttctgcgagtgtgacaacttcaactgt
gaccgctccaacaacaaactctgtggaggacatggtcactgtgagtgcagggtgtgtata
tgtgatgccaactggacaggcagtgcctgtgactgttctctggacaccacgacctgcctg
gcttcaaacaagcagatctgtaacggacgaggcacctgtgagtgtggcacctgcaagtgt
actaacccaaagttccagggccccagctgtgagatctgtcctacctgtccaggggtctgc
gcagaacacaaggagtgtgttcagtgcagggcctttgggacgggggagaagaaggacacg
tgtgagagagactgtagctacttcaacctgatcaaggtgaaggacagagacaagctgcct
cagccaggacaggccttccccctgatgcattgtaaggagagggatgccaacgactgctgg
ttctactacacctacgctgtcaacaagacagagaaggaggtccatgtggtggaaacacta
gactgccctgcgggccctgacatcatccccatcgtggctggcgtggtggcgggcatcgtc
ctgatcggcctggctttgcttctcatctggaagctgctcatgatcatccacgacaggaga
gagttcgccaagtttgagaaggagaagatgaatgctaaatgggacacgggcgaaaaccct
atctacaagagtgctgttacgacagtggtcaaccccaaatatgaaggcaaatga
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integrated database retrieval system