KEGG   Oncorhynchus kisutch (coho salmon): 109909625
Entry
109909625         CDS       T09179                                 
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03030  DNA replication
oki03410  Base excision repair
oki03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109909625 (fen1)
   03410 Base excision repair
    109909625 (fen1)
   03450 Non-homologous end-joining
    109909625 (fen1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oki03032]
    109909625 (fen1)
   03400 DNA repair and recombination proteins [BR:oki03400]
    109909625 (fen1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109909625 (fen1)
DNA replication proteins [BR:oki03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109909625 (fen1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     109909625 (fen1)
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109909625 (fen1)
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109909625 (fen1)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 109909625
NCBI-ProteinID: XP_031652666
Ensembl: ENSOKIG00005024619
LinkDB
Position
LG18:75829117..75834317
AA seq 380 aa
MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTGVLLRHLTASEAKKLPIQEFLFSRLLQDINLTHEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIRQHGSIEEILENIDPSKHPAPEDWLYKEARGLFLQPDVVDCSTVDLKWSE
PNEDALIQFMCAEKQFSEDRIKNGCKKILKSRQGSTQGRLDTFFTITGSLSSKRKEPETK
GSNKKKQKTGATPGKFKKGK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcacgggcttgcaaagttgattgcagaccaggcaccatctgctataaaagaa
caagacatcaagaactactttgggcggaagatcgcaatagacgcctccatgtgtatgtat
cagttccttgtcgctgtcagacaggatggtaatgtgctacaaaacgaggatggagagacc
acaagccatctcatgggcatgttctaccgaactatccgcatgctggagcacggcatcaag
cctgtctatgtgtttgatggcaagcccccacagctgaagtcaggagagctggagaagaga
ggagagaggagggctgaggctgagaaactgctggcccaggcacaggaagcaggggagcag
gagaacattgataagttcagtaaacgtctggtgaaagtcacccggcaacacaacgacgaa
tgcaagaagctgctcaccctgatgggggtgccatacattgaggctccgtgtgaggctgag
gcgagctgcgctgctctggttaaggctgggaaggtgtttgccactgcaacagaggatatg
gacggtctgacttttggaacaggggtcctactaaggcacctcactgccagcgaagccaaa
aagcttcctatccaggagttcctgttcagtcgccttctgcaggacattaatctgacccat
gagcagttcatagacctgtgcatactgctgggctgtgactactgtggtactatcaaggga
atcgggcccaagagagccattgacttgatcagacaacacggctccatcgaggagattctg
gagaacatcgacccatctaagcaccctgccccagaggactggctgtataaggaagccaga
gggctgttcctgcagcctgacgtggtggactgctccaccgtagacctcaagtggagcgag
cctaacgaggatgccctcatccagttcatgtgtgcagagaaacagttcagtgaggaccgc
atcaagaacggctgtaagaagattctgaagagccgacagggcagcacacagggacgactg
gacaccttcttcaccatcaccgggtctctgtcatcaaaacgcaaggaacctgagacaaag
ggatccaacaagaagaaacagaagaccggtgcaaccccaggcaaatttaagaagggcaaa
tag

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