Oncorhynchus kisutch (coho salmon): 109909633
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Entry
109909633 CDS
T09179
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109909633
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109909633
09142 Cell motility
04820 Cytoskeleton in muscle cells
109909633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
ARA70
Motif
Other DBs
NCBI-GeneID:
109909633
NCBI-ProteinID:
XP_031652615
Ensembl:
ENSOKIG00005015023
LinkDB
All DBs
Position
LG18:73848288..73926338
Genome browser
AA seq
3089 aa
AA seq
DB search
MRLLCCAIVLLSASSAECQQRGLFPAIFNLASNAEITTNATCGEPEPEMYCKLVEHVPGR
RIRNSQCRTCNAQSQNPKEQHPITNAIDGTNGWWQSPSIKNGRQFHWVTLTLDLHQIFQV
AYVIIKAANSPRPGNWVLERSMDGVDYTPWQYYAISDTECLTRYNITPRLGPPTYKRDDE
VICTSYYSRLVPLEHGEIHTSLINGRPSADQLTSELLDFTSARYIRLRLQRIRTLNADLM
TLSYRDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVAKKLQCVCEHNTCGE
SCNECCPGYHQEPWQPGTLSDGNTCEKCNCHDKANDCYFNQTVANHKMSMNSHGDFHGGG
VCISCTQNTAGVNCEACADGFYRPNKVSPHNENPCVECSCDMKGSLTPACIRDDNHAKPE
NGLNPGQCLCMEGFAGERCDRCAFGYRDFPLCSRCECSLEGSLNIDPCTECICKENVMGA
DCDLCKQGFFNLEGSDPEGCTECFCFGVSDVCESSPWSMSQTVQSNGWLLTSESVSVYTA
PLIDEDNNLIIPNITMIQSYRFVSTWAAPESFLGKRLTSYGGFLSYSVAYDVSVDNVDRS
LPSQFDLIIEGNGRTLRQMPPRQLLLTPLNEQHVSVELLPQGFVDLHTGQRVDRDELMTA
LADVAGLRIRGHLNASAEGELRLSTVSLDMVDINSTNTVQARDVEQCECPMGYSGTSCES
CSSGFYRLGGILFGGNCLQCECNNHATECDINRVCLDCTHNTTGPHCDQCLHGYYGNPSE
GTPEDCQRCACPLTVATNNFSPTCLLEGPGQVTCDRCQQGYTGTKCERCANGYHGDPTVA
GQECVVCECNGNVDPWEPGHCDTSSGMCLKCHSHTSGDQCERCEDGYYGDAITAKNCQAC
GCHDKGSYSGVCDLLTGQCTCKPNVVGEKCDQCQVGFHGLLSGQGCRECDCIQSGSVSVA
CEEDGRCQCIPGVAGDKCDRCHHSYFNYQGSGCTQCECGHTHGNCNVTTGECICPPHTRG
EKCDLCEEGHWGHETVTGCKSCNCSEMGSYATQCGITNGQCQCRSDFAGQNCDRCAMGYR
GYPECTVCNCNINGTREEFCDEALGVCSCEAPGNCVCKDNVGGGGCDECKTGTLGLSVSN
PAGCSPCFCFGVSLDCEELGGMVRVPITLGSDPELLRVVSQSDLQGSVVGVYYQNRDMLL
DTRDIETPSLAGPYYWRLPKHYQGNKLLSYGGKLSYVVAFYAMDGAGLANYEPQVLMRGG
HLGKQVIYIDMPAPDNGVTTRQDVPLTEHKWKYFNSVSEKAVSHSDFMAVLSHIEYITIK
ASYGTGLQQSRISNITMDTALEVVQGLEDMELASLIEICECPAGYAGLSCQECAPGYYRQ
PVTELNKRGKRPLIQPCVPCRCNNHSQACDLDTGECLGCQHNTAGEHCSVCSSGYYGDVK
GSVRDCSLCACPLKENSFSPTCALEGVVGDFRCNACKPGYEGRYCERCSVGYYGNPSGPG
GKCEACQCSTAGSLHPACDSLTGQCECKAGVRGRLCDQCEARHVLDGDQCVLCDDECTRV
LLDDLDAVECSFLSVNLTGVILSPYSTLVNLENNTQEVKTLMSSYRSPDYHLTRDEEDMT
NLTQDIDGLLQKAMGVSADGEEVARSTENSVTQGAELLEYINTIQTSTQALAEQAGRLNR
TDNVEMNEAKSRRLMKQVAAMLETIRVVDLAQANASISTELWAAEALLQRVQKHLQEPQG
VIESQTLNISSSLTQHQQQLVDAQALLNTARENNNQTHTLLGSINTNLPQYQDLRQNVGR
LNQTAETQLEETQDILADAVNLAEDMSNVTSQLEGAKEQLEQWNPMLRKHVDALVMELRK
QEALELVYKAEDHAQQLSKKAQALQSSLAEVMNTTLKATSAAHANSNIRVNIQPAEEMAN
RAILTAAMALNMTAQQEVSLTDLGSEAVQCSAKILAECLALKNSTGGLLANISDVTDRMA
LLINNLHNTSRLIPESAFLLHSRPNGTSEQVLEAKEQAAMANSSLQRALEHLEELRVRLE
ESSKAVAQAKTSVSNTNQLFSDSHSTARTAESKLNEAESRTERLYDRLKPLKTLRENLSR
NLSEIREMINQARKQAASIKVSVLADKDCVRAYKPEMSSSNFNTLTMTVKTSEPDNLLFY
MGSSSSVDFMAVEMHRGKVGFLWDAGSGHAKLEYPDIQINNNKWHRINATRFGRHGTLSV
HQLESDPLPAVKTSSPRSATVLDVNKFTLIFVGGLGGQIKKSSAVKMTQFKGCMGEASLN
EKNIGLWNYAEREGQCRGCFMSPQTEETSFHFDGSGYSVVEKPLRSTSTSIVLLFKTLSP
NGLLLYLASNATRDFLSIELVEGQVHLTFELGSGPLTLSSNKAYNTGSWYKITLQRNKRK
AYISVMAADNSSDKEIIEAESPGSASDLNRSDLDPIYIGGLPMSRPIRRQVVARSYVGCI
KNMEIARSNFDLLRDSYGVKKGCVLEPIRSVSVLREGYVELPSMSLGSQGELLASFSTRN
HTGIILAGFSKAGTRKRRQARQPILAVMLVSGHLEVHVNMVEGGSVHKVVVKSRSGSFSD
GQEHSVILQRNRKTMTVLVDEDHQETVRLSSEKASLTFSSLYMGGLPPEEGVGLLRTTSS
FYGCIRNLALDAKLLDLSAAVKYHNVDMDSCLLEERPKRVLLPDDTDLEAEPTLDPSRPP
PPPPTQLSALTPGTLTCASMDNSTSLPEASQFGISRHSHKVLNINPNTVRRSFSLELSVR
TFAQSGLIYYMAHANQMDYATLQLLGGRLFFTCDKGSGPATASFPVPVNDGQWHTVKTDF
NKKSVVISVDSQASAPVLAKGNTLDVENKLYLGGLPHTYTAKKIGNVTHSLAGCIQKVIL
NSVELDTQSPVSEHSTAHCFTAAQDGTFFNGRGYAALMKEGYKVGSDVTVALEFRSTAPD
GVLLGVSSAKVDAIGLELASGQAVFHVNNGAGRVSATSRLGRWLCDGRWHTLLAKKTKNA
LSLSVDGFTVLTDNPHPQSTSAETKDPIYVGGFPVGVKQNCLTSRSSFRGCMRNIRLIKG
HVIDILDFSTAFTLQGVSPHSCPATTLPR
NT seq
9270 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcttatgctgtgcaattgtactgctatctgcatcctccgcggagtgccagcaa
agaggtctcttccccgccatcttcaacctggccagtaatgcagagatcaccaccaacgcc
acctgtggagagcctgagccagagatgtactgtaaactggtggaacacgtaccaggacga
cgcatccgcaactcccagtgtcggacctgtaatgcccagagtcaaaaccccaaagagcaa
catccaatcaccaacgccattgacggcaccaacgggtggtggcaaagccccagcattaaa
aatggcagacagttccactgggtgaccctcacactagatttacaccagattttccaggtg
gcctacgtcatcatcaaggcagccaactctcctcgtcctggtaactgggtgttggagcgt
tcaatggacggtgtggattacacaccctggcagtactacgccatcagcgacacagaatgt
ctgacccgttacaacatcaccccccgcctcggaccccccacctacaaacgagacgacgag
gttatctgtacatcttactactcgcggctcgtacccctggagcacggagagatccacacg
tctttgatcaatgggcggcccagtgctgaccaactgacctcagagttgctggacttcacc
tcagcccgctacatccgcctgcgtctgcagagaatccgcacgctcaacgccgacctcatg
accctgagctaccgcgaccccaaggaggtggaccccatcgtcaccagacggtactactat
tcaatcaaagacatttcagtgggtgggatgtgcatctgttacggacacgcccagagctgt
ccctgggaccccgttgccaagaagttgcagtgtgtatgtgagcacaatacctgtggggag
agctgtaatgagtgttgccctggctaccaccaggaaccgtggcaaccgggaaccctctct
gatggcaacacctgcgagaaatgtaactgccacgacaaggccaacgactgctacttcaac
cagacggtggccaaccacaagatgagcatgaactcacatggtgacttccatggcgggggc
gtttgtatcagctgtacccagaacactgccggtgtcaactgtgaggcctgcgcagatggg
ttctacagacccaacaaggtgtctccgcacaatgagaacccatgtgtggagtgcagctgt
gacatgaaggggtctttgactcctgcctgtatcagagatgacaaccacgccaagcctgag
aatggtctgaacccaggccagtgtctgtgtatggagggctttgcgggcgagcgctgtgac
cgctgtgcctttggctacagggacttccccctgtgttcacgctgtgagtgcagtctggag
ggcagcctcaacatcgacccctgcacagagtgcatctgcaaggagaacgtgatgggggcc
gactgtgacctgtgtaagcagggtttcttcaacctggagggcagtgacccagagggctgc
actgagtgtttctgcttcggtgtgtctgacgtgtgtgagagctcaccctggtctatgtct
cagacagtgcagtccaatggatggctccttacctctgaaagcgtctctgtctacacggca
cccctcatagatgaagacaacaacctcatcatcccaaacatcaccatgatccaatcgtac
cgttttgtttctacatgggccgccccagagtccttcctggggaaaaggctgacatcgtac
ggagggtttttgagctacagcgtagcatatgatgtttcagtggacaacgtggacaggtct
ctgccgtcacagtttgatttgattatcgagggtaatgggaggaccctgcgtcagatgccc
cccaggcagctcttgttgacgcccctgaacgagcagcatgtttctgtggagctcttgcca
cagggcttcgtagacctgcacacaggtcagagggtggacagggacgagctgatgactgca
ctggccgacgtggccgggctgaggatcagaggtcacctcaatgccagtgcagagggggaa
ctcagattgagcactgtatctctggacatggtagacatcaattctactaacacagtccag
gcccgggacgtggagcagtgtgagtgtcccatgggctactctggcacatcctgtgagtcc
tgttcatctgggttctatcgcctcggggggatcctgttcggaggcaactgtctccagtgt
gagtgtaacaaccatgctacggaatgtgacatcaacagagtgtgtctggactgtactcac
aataccactgggccccactgtgaccaatgcctccacggttactatggcaacccctctgag
ggcaccccggaggactgccagagatgcgcttgcccgctgacagtggcaacgaacaatttc
agccccacctgtctcctggagggccctgggcaggtgacatgtgaccggtgtcagcagggc
tacactgggactaagtgtgagaggtgtgctaacggttaccacggcgacccgacggtggca
ggccaggagtgcgtggtgtgtgagtgtaacggtaacgtggacccctgggagccgggccac
tgtgacaccagcagcggtatgtgtctgaagtgtcacagccacaccagcggagaccagtgt
gagaggtgtgaggacggctactacggtgacgccatcaccgccaagaactgccaagcttgt
ggttgccatgacaaagggtcgtactcgggagtgtgtgacctgctcactggacagtgtacc
tgcaaacccaacgtggtgggagagaagtgtgaccagtgtcaggtgggcttccacggtctt
ctcagcggacaggggtgcagagaatgtgactgtatccagtcaggatctgtgtccgtggcc
tgtgaggaagatgggaggtgccaatgcatcccaggggtggcgggggacaagtgtgaccgc
tgtcatcacagttactttaactaccagggcagcggctgtacacagtgtgagtgtggccac
acccatggcaactgtaacgtgacgacaggcgagtgtatctgtcctccccacaccagagga
gagaagtgtgatctgtgtgaggaaggtcactggggtcacgaaactgtgacaggatgtaag
tcatgtaactgcagtgagatgggcagctatgccacccagtgtggcatcaccaatgggcag
tgccagtgccgctctgatttcgctgggcagaactgtgaccgctgtgccatgggctacagg
ggctacccagaatgcacggtgtgcaactgcaacatcaatggcaccagagaggagttctgt
gatgaggcactgggcgtgtgcagctgtgaggccccagggaactgtgtgtgcaaggacaat
gtgggtggaggtggctgtgatgagtgtaagacgggaaccttgggcctatctgtatctaac
ccggccggctgcagcccctgcttctgtttcggggtctccttagactgtgaggagctgggt
gggatggtccgggtaccgatcacactgggttctgacccagagctgctgcgtgtggtcagt
cagagtgacctccagggcagtgtagtgggggtctactaccagaaccgagacatgctgcta
gacactagggacatagagacccccagcctggctggaccctactactggaggctgcctaaa
cactaccagggaaacaagttgttgtcgtatggagggaagctatcctacgtggtggcgttc
tatgctatggacggggccggcctggccaactacgagcctcaggtcctgatgagggggggt
catctggggaagcaggtcatctacatagacatgcctgcccctgacaacggggtaacaacc
cgtcaggacgtcccactgactgagcacaagtggaagtatttcaactctgtgtcagagaaa
gctgtgagtcactctgacttcatggcagtcctgagccacatcgagtacatcaccatcaag
gcatcgtatggtacagggctacagcagagcagaatatccaatatcactatggatacggcc
ctagaggtggtgcaagggttggaggatatggagttggcgagtctaatcgagatctgtgaa
tgtccagctggctacgccggactgtcctgccaggagtgtgccccgggctactaccgccaa
ccagtgactgagctgaacaagcgggggaagagacccctgatccagccgtgtgtgccctgc
cgttgtaacaaccacagccaggcctgtgacctggacacgggagaatgtctgggctgtcaa
cacaacacagcaggggagcactgtagcgtgtgttcctcggggtactatggcgacgtgaaa
ggctccgtcagggactgctcgctgtgtgcctgccccctcaaagagaacagcttcagtcct
acctgtgctctagagggagtggtgggagacttccgctgcaacgcctgcaagcccggctat
gaggggcgctactgtgagcggtgttcagtgggttactatgggaacccgtctggtccagga
gggaagtgtgaggcgtgtcagtgtagtactgcaggttctctccatccggcatgtgactct
ctgacgggccagtgtgaatgtaaagccggggtcaggggacgcctgtgtgaccagtgcgag
gcgagacacgtcctggacggggaccagtgtgtcttgtgtgatgatgagtgtaccagggtg
ctcctggatgacctggatgcagtagagtgctccttcctgtctgtcaacctgaccggggtc
atcctgtcaccctacagcacactggtcaacttggagaacaacacgcaagaggtcaagact
ctgatgtcttcgtataggagcccagactatcacctgaccagggatgaggaggacatgaca
aacctcacccaggacatagacggactgctacagaaggctatgggtgtgtctgctgatgga
gaggaagtggcccggtccacagagaacagcgttacccaaggggctgagcttctggagtac
atcaacaccattcagacttctacacaagccctggcggagcaagctggccgtctgaacagg
acagacaacgtggagatgaacgaggctaagagcagacggctaatgaagcaggtggcggcc
atgttggaaacaatcagagtggtcgacttagcccaggccaacgccagcatctctacagaa
ctctgggctgccgaagctctcctccagagggtgcagaagcacctccaggagccccaggga
gtgatagagtcccagaccctcaacatctccagcagtctgacccaacaccaacagcagcta
gtggacgcccaggcccttctgaacactgccagggagaacaacaaccaaacacacaccctg
ctgggcagcatcaacaccaatctgccacagtaccaggatctgaggcagaatgtgggccgg
ctgaaccagacggcagaaacacaactggaggagactcaggacatcctggctgatgctgtc
aatctggcagaggacatgagcaacgtcacctctcaactggagggggccaaggaacagctg
gagcagtggaaccccatgttgaggaagcatgtggatgctctggtgatggagctgaggaag
caagaggctctggagctggtctacaaggctgaggaccacgcccaacaactgagcaagaag
gcccaggctctgcagagttctctagcggaggtgatgaataccactctgaaagccaccagt
gcagcacatgccaactctaacatcagagttaacatccagcctgcagaggagatggctaac
cgagccatcctgactgctgctatggccctcaacatgacggcccagcaagaggtgtcactt
actgatctgggatctgaggctgtgcagtgtagtgctaagatactggctgagtgtctggcc
ctgaaaaacagcactgggggtctcctcgctaacatcagtgatgtgacagacagaatggcc
ttgttgataaataaccttcataacaccagcagactgatcccagagtcagccttcctgctc
catagccggcccaacggcaccagtgagcaggtgctggaggccaaagagcaggctgccatg
gccaactcctccctgcagagggcactggagcacctggaggagctcagggtcagactggag
gagtccagcaaggcagtggcccaggccaaaaccagcgtctccaacacaaaccagctgttc
tctgactcacactcaaccgccaggactgctgagtctaagctgaatgaggcagagagtcgt
accgagaggctgtatgaccgtcttaaacccctgaagaccctgcgggaaaacctgagcaga
aacctgtctgagatcagagagatgatcaaccaggcccgcaaacaggctgcctcgatcaag
gtgtcagtgctggcagacaaagactgtgtgagggcctacaagcctgagatgtcctccagt
aacttcaacactctaactatgaccgtcaagaccagcgagcctgacaacctgctcttctat
atgggcagcagctccagcgtggacttcatggcagtggagatgcatcgtggcaaggtgggg
ttcttgtgggatgcgggttcaggccacgccaaactggagtaccccgacatccagatcaac
aacaacaagtggcatcgcatcaacgccacacgctttgggaggcacggcacgctgtcagtc
caccagctggagtcagaccccctgcccgcggtcaagaccagctcaccacgctctgctacg
gtcctggatgtcaacaagtttaccctcatatttgttggtggcctgggaggccagatcaag
aagtcctccgcagtgaagatgacccagttcaagggctgtatgggggaggcgtcgctcaac
gagaagaacatcgggctgtggaactacgccgagagggagggccagtgtcgcggctgcttc
atgagtccgcagacggaggagacgtccttccactttgatggcagtggctactcagtggta
gagaaacccctccgctccacctccacttccatcgtactgctgttcaagaccctctccccc
aacggcctgctgctctacctggcctccaatgccacgagggacttcctgtccattgagctg
gtggagggccaagtccatctaacctttgaacttggctctggtcctctgaccctctcctcc
aacaaagcctataacactggcagctggtacaagatcaccctgcagaggaacaaacgcaaa
gcttatatatctgtgatggctgcagacaactcatcagacaaagagattatagaggcagag
tctcctggctccgcctctgatctcaaccgctctgacctggacccaatctacatcggggga
ctgcccatgtctcgacctatcaggagacaagtagtagcacggtcctatgtgggctgcatc
aaaaacatggagatcgcccgctccaactttgaccttctccgagactcctatggtgtcaag
aaaggctgtgtgttagagccaatccgcagtgtgtctgtactgagagagggctatgtggag
ctgccatcaatgtctcttggctcccagggggagctgctggcctccttctccacccgcaac
cacactggcatcatcctggcaggcttcagcaaggcaggcacccgcaaacgcagacaggca
cgccagcccatcctggcggtcatgctggtgtcggggcacttggaggttcacgtcaacatg
gtggagggcgggagcgtccacaaggttgtggtcaaatcacgctctgggagcttcagtgac
ggacaggagcactctgtcatcctacagaggaacaggaagacgatgacggtactggtggat
gaggaccaccaggagacagtgcgcctgtcctcggagaaggcctctctgaccttctcctct
ctgtacatgggtggcctcccaccagaagagggcgtcggactgctacgaaccacttcctcc
ttctacggctgcatcaggaacctggccctggatgccaagttgttggacctgtcagctgca
gtgaagtaccacaatgtggacatggacagctgtctattggaggagaggcctaagagggtc
ctcctacctgatgacactgacctggaggccgagcccaccctggacccttccagaccccct
ccaccaccccccactcagctcagcgctctcacccccggcacgctcacgtgtgcatcgatg
gacaacagcacatccctcccagaggccagtcagtttggcatctccagacacagtcataag
gtcctcaacatcaaccccaacacagtgaggaggagtttctctctggagctgtctgtgcgt
acctttgcccagagtggtttgatctactacatggcccacgccaaccagatggactacgcc
actctgcagctgctagggggtcgtctgttcttcacctgtgacaagggcagcggccccgcc
accgcctccttccctgtgccggtcaacgacggccagtggcacacagtgaagacagacttc
aataagaagagtgtggtaatcagtgtagacagccaggcgtcagctccagtgctggctaaa
ggcaacactctggatgtggagaacaagctgtacctgggaggactgccccatacctacacc
gccaagaagataggcaacgtgacccacagcttggcgggatgcatccagaaggtgatcctg
aacagcgttgaacttgacacccagagtccagtgtctgaacactcgactgctcactgtttc
actgcagcccaggacgggaccttcttcaatgggagaggatatgctgctctgatgaaagag
gggtacaaggtgggctcagacgtgacggtggcgctggagttccgcagcacggcgcctgac
ggggtcctcctgggggtcagcagcgccaaggtggacgccatcggcctggagcttgccagt
ggacaggcggtgttccacgtgaacaacggcgccgggcgggtgtcggccacgtcgcggctg
ggccggtggctgtgtgacggccgctggcacaccctgctggccaagaagaccaagaacgct
cttagtctgagcgtggacgggttcacggtgctcactgacaacccccacccccagtctacc
tccgctgagacgaaggacccaatctacgtgggaggcttccctgtcggagtgaaacagaac
tgcctgacttccagatcgtcattccgtggttgtatgcgtaacatccgcctgatcaagggc
cacgtgatcgacatcctggacttcagtaccgcattcaccctccaaggagtgtctccacac
tcctgccccgccacaaccttaccacgataa
DBGET
integrated database retrieval system