Oncorhynchus kisutch (coho salmon): 109909871
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Entry
109909871 CDS
T09179
Name
(RefSeq) uncharacterized protein LOC109909871 isoform X2
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109909871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109909871
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109909871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
109909871
NCBI-ProteinID:
XP_020364527
Ensembl:
ENSOKIG00005022070
LinkDB
All DBs
Position
LG18:complement(69684783..69716863)
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AA seq
1327 aa
AA seq
DB search
MRRAWQSDGTPSTSEDSLSYRRGSTSDPDLRPPARPRPLSDLYPLKAHVSVAVPPSLLSG
CDAQVQPMTCDFNSEESRLNGFNTATWSSPVIGHPSRIMRLFSTQKKCTVPGDSQGSTRP
LSFQGPPSSAGVPQVWPGLSGLTVMGSFKKLRSSVLQGIQKRGTANQHDEYTSAAIQSGD
NVMVTTNQSPRLRCGKSYSVSNGVSIGQQMAGLSPYGSDNEDEEEVVDEEDGLQRNTWFS
RSIRRAYGAGRISLLDAGEGKQGDDPGLGVSTNQRPGSGSGSVSEVNLHLEESVNENVNA
LSRLSKSADNLHLFKGPFRNKVPCPSPQTDSPGANGDPSIQRTASASSGDLRDRSQSPVC
FRSPVGAKGHMLKLVGSITDLTVRRRPNPPPVTSPGSPVTPLSPLSRLHDDYSRRTPCLP
ASDRQRRPSPARTRAAAERNSTSVRLEHTPTIHPQPQSEYHPALFPIEPQEGPDHVFAFP
SINQPFTTTSFSLSARAQRSSLCEGDRPQERQGDGWRARCDSTPHPQREPCGSHRKHQPD
VNAEGKTEPKQCVWTRPDQDQEDQQCTLEEQGREALLGGEETPPPSATSTPSLTPTWPPE
SPTSPMSPTKIGSTETSTSFIPRQRAGRSRPRPISDYAQLVARKYAIPEEETELHPKERT
TNGTLYQDGKSNGGSQDSDSTGNYNMNGDLPCRRRQPMSVIGGAEEREDRLPSPLSRPPV
PSHQVPPYKAVSARFRPSTFSQSTPIGLDRLGRRKLHRVLSVEDAGSERSAAVDGDSVSE
EEGSFDELSDVTTYLQPGVELSALSQWISQGQAVYAEALWDHVTMEEQELAFKAGDVIRV
LEAPHKDWWWGMGADREAWFPSSFVRVRVNQEEDSGAESVESCALDQEDPHTDTRDTQTH
SAEHREQMRTNVVKEIMNTERIYIKHLRDICEGYIRQCGKHPGMFTELQLKTIFSNIEDI
YKFQRQFLKDLERKYNTDQPHLSEIGACFLLQGEGFSIYSEYCNTHPAACGELQRLMKLG
RYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKDHSDYGGVSDAYE
AMKNVASLINEGKRRLESVDAIAHWQVAILRWEGADVLECSSELIHSGELTRIVRQGNKT
QQRSFFLFDHQLVFCKKDVLRRDLLHYRGRLDMDNTSVLQMPDGRDPELGILLRNALRLR
NSSTLETLCYLCCRKPQDRQRWLQAFARERQRVQEDQEMGMKISETQRKQAIFNARRSKR
GKMKPIGYSGSVPPHHHHHHQPLHPIHQRHVTVPTSVPQQQVFTLAEPKRKPAHLWYTFT
RHALFRK
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgagaagggcatggcagagcgatggaaccccgtccaccagcgaggactctctctcctac
cgccgtggctccacatctgaccctgaccttcgacctccagcccgaccccgacccctcagc
gacctttaccccttgaaagctcatgtttcggtggcagtgcccccttctctgctgtctggg
tgtgatgctcaggtacagcccatgacctgtgactttaacagtgaagagagtagactgaac
gggttcaacacagccacctggtccagccctgtgataggccacccctccaggatcatgagg
ctcttctctacccagaagaagtgcactgttcctggggacagtcagggctctaccaggccc
ctctccttccagggccctccatccagtgccggggtcccacaggtttggccaggcctgtca
gggctgaccgtcatgggctcctttaagaagctacgctcctcagtgctccagggtatccag
aaacgagggacagccaatcagcatgacgagtacacctcagcagccatccagagtggagat
aatgtaatggtcacaaccaatcagagcccaagacttagatgtggaaagagctatagcgtc
tccaatggggtgtctattggccaacagatggctgggttgagcccttatggttctgacaat
gaagatgaggaggaggtagtagatgaggaagatggactacagagaaacacatggttctcc
aggagtatccggagagcatacggggcagggcgcatctcactgctggacgctggagagggg
aaacaaggggatgatccaggactgggggtttcaaccaatcagaggccaggttcaggctcc
ggttcagtgtcagaggtgaacctccatttggaggagagtgtgaatgaaaatgtgaatgcg
ctaagcagactgagcaagagtgcagacaacctacacctcttcaagggccctttcagaaac
aaagtcccctgtccctctcctcagacagactccccgggtgccaatggggaccccagcatc
cagagaacagccagtgcctcatccggtgaccttagggaccgcagccagagtcctgtttgc
tttaggagtccagtgggggccaagggccacatgttgaagctagtgggcagtataactgac
ctgaccgtgagacgcagacctaacccgcctcctgtcacctccccgggctcccccgtgacc
cccttgtcacccctcagtcgtctccatgacgactactcacgccgcacgccctgcctgccc
gccagcgaccgccaacgccggccctcgcccgccagaacgagagctgcagcggagaggaat
agtacttcagtacgactggaacacacgcctaccatccacccccagccccagtctgagtac
cacccagccctgttccccatagagccccaggagggaccagaccatgtcttcgcttttccc
agcattaaccagcctttcactacaacctcattttccctgagtgctcgtgctcagaggagc
agcctgtgtgagggggacaggcctcaggagagacagggagatgggtggagagcacggtgt
gattccactccacacccccagcgggagccctgtgggagtcacagaaaacaccagccagac
gtcaacgcagagggaaagactgaaccaaagcagtgcgtatggaccagaccagaccaagat
caggaggaccagcagtgtacgttagaagaacagggcagagaggcactattagggggtgaa
gagacgccccctccttcagccaccagtaccccttctctcacaccaacatggcccccagag
tctcccacttcacccatgtcaccgacgaaaataggttccacagaaacgtccacgtccttc
atccccaggcaaagggcgggccgatcgagacctcgaccaatctctgactacgctcagctg
gtagccaggaagtacgccatccccgaggaggagacggagctacatcctaaggagaggact
acaaatggaactctctatcaagacggcaaaagcaatggaggctcgcaggacagtgacagc
acagggaactacaatatgaatggagatctcccgtgccggaggagacagccaatgtctgtt
attggaggagctgaggagagagaggaccgtctgccttctcccctgtcgcggccccctgtc
ccgtcccaccaagtgcccccctacaaagcggtgtcggccaggttccgcccctccaccttc
tcccagagcacccccatcggactggaccgcctcggacgacgcaaactacacagagtcctc
agtgttgaggacgccggctcagaacgttctgcagcggtggatggtgacagtgtgagtgag
gaggaggggagcttcgatgagctcagcgacgtcacaacgtacctgcagcctggggtggag
ctgtctgctctcagccagtggataagccagggtcaagcggtgtatgcggaggccctgtgg
gaccatgtgacgatggaggagcaggagctggcgttcaaggcgggggatgtgatccgggtg
ctggaggcccctcacaaggactggtggtggggcatgggggcagacagggaggcctggttc
ccctctagcttcgtcagggttcgtgtgaaccaggaggaggactcaggagcagaaagtgta
gagagttgtgctctggaccaagaggacccacacactgacacccgggatactcaaacacac
agcgccgagcaccgtgagcagatgaggactaacgtggtcaaagagatcatgaatactgaa
cgcatctacatcaaacatctccgggacatctgtgagggctatatccgtcagtgtggtaaa
cacccgggcatgttcactgagctgcagctgaagaccatcttcagtaacatcgaggacatc
tacaagttccagagacagttcctcaaagacctggagaggaagtacaacacagaccagcct
cacctcagtgagataggagcctgtttcctcttacagggggaggggttttccatctactct
gagtactgtaacacccaccctgcagcgtgtggggagctgcagcgcctcatgaagctgggc
aggtacaagcacttctttgaggcctgccggctgctgcagcagatgattgacatctccatc
gccggcttcctgctcacgcctgtccagaagatctgcaagtaccccctgcagttgggagag
ctgctcaaatacacccccaaagaccacagtgactatggtggagttagtgatgcgtacgag
gcgatgaagaatgtggcgagcctgatcaacgaggggaaaaggaggctggagagtgttgac
gccatagctcactggcaggtggccatcctacgctgggagggagcggatgttctggagtgc
agctcggagctgatccactctggggaactcacccggattgtccgacagggcaacaagacg
cagcagcgcagcttcttcctgttcgaccaccagctggtgttctgtaagaaggacgtactg
cgccgcgacctgctgcactaccgtggtcgcctggacatggacaacacatcggtgctgcag
atgcccgatggcagggaccccgagctgggcatcttgctgaggaacgccttgcggctccgg
aacagctctaccctggagaccctgtgttacctctgctgcaggaaaccccaggatagacaa
cgctggctgcaggccttcgccagggagagacagagggtacaggaggaccaggagatggga
atgaagatcagtgaaacgcagagaaaacaagcaatcttcaatgcaagaagatccaaacga
gggaaaatgaagcccataggctactctggctctgtcccgccccaccaccaccaccaccac
caacccctgcatccaattcaccagcgccatgttactgtgccaaccagtgtgcctcagcag
caggtgttcacattggccgagcccaagcgaaagcccgcccacctgtggtacacctttacc
cgacatgccttgttcaggaagtga
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