Oncorhynchus kisutch (coho salmon): 109909929
Help
Entry
109909929 CDS
T09179
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109909929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109909929
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109909929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
PSY3
Tox-ODYAM1
PBC
Motif
Other DBs
NCBI-GeneID:
109909929
NCBI-ProteinID:
XP_020364602
Ensembl:
ENSOKIG00005043213
UniProt:
A0A8C7K9P2
LinkDB
All DBs
Position
LG18:complement(66059536..66071537)
Genome browser
AA seq
594 aa
AA seq
DB search
MSGFNFGSGSIGSTNAGGGFSFGAAASTPAAAGTGGFTLGGALGATAPASTTTTSSLGLG
GSLFSQKPTGGFSFNTPASGAPAASTAPTTGFSMTFNKPSASAQPFSLTAASSAPTGAGL
TLGSVLTSTAPQQGATGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTGLSQSTLGGLGF
ALGLGQTTLGSGGLTLGSLASTSTAVSAAPSLGLGGVDFSTSSEKKNDKSSGASPQDSKA
LKDENLPPVICQDVDNFQKFVKEQKQVHEEISRMSSKAMLKVQDDIKSLKQLLSVSASGL
QRNALAIDKLKMETAQELKNADIALRTQKTPPGLQHDNTAPYDYFRCLVEQFEVQLQQYR
QQIEELENHLTTQGSGSHITPQDLSLAMQKLYQTFVALAAQLQSVHENVKTLKQQYLGYR
RAFLEDSTDVFESKRVASKKWQSAPRITTGPAPFSSIPNAAAVAMAATLSQQQQPGPGSQ
VSLGTGLGNPFALGVGSSLGTSGLGVFGGGPGFGGVATGGSSFGFSSASKPSGGSLSAGF
GSNSSSGFNFSSPGLNASAGLTFGVSNPPATGFGTGGPLLQLKKPPVGNKRGKR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcggatccgggtctattggttccaccaacgctggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgggt
ggagctctgggtgctacagccccagcctccaccaccaccacctcttctctgggcctgggc
gggtcactattctcacaaaaacctactggggggttctcctttaacactcctgcctcaggt
gccccagcagcctctacagcccctaccacgggcttcagtatgaccttcaataaaccctct
gcctcggcccaacccttctccctcactgcagcctcctcagcccccacaggggcaggactg
acactaggctcagtcctcacctccactgcgccacagcaaggagccacaggattctctctc
aacctagggggtgtggccgcaagtacagccccatccacaggtctatcgctgggttccagt
atgttctctaacatggctactactggtctgagtcagtccactcttggaggactggggttt
gctttaggtttgggccagaccactctcggatcaggggggttgacgttaggttccctggcc
tctacctccacggcggtgtcagcggcccccagccttggactgggaggagttgacttcagc
acctcctcagagaagaaaaacgacaaatcatcaggggccagcccacaagacagtaaagct
ttgaaagatgaaaatttgcctccagtcatctgtcaggatgtagacaacttccagaagttt
gtgaaggagcagaagcaggttcacgaggagatcagcaggatgtcatctaaagccatgctg
aaggttcaggacgacatcaagagtctcaaacagctgctgtctgtcagcgcttcgggacta
cagagaaacgccctggctatagacaaactgaagatggagactgcgcaggagttgaagaat
gcagacatagctctgcggactcagaagactccccctggactccagcacgacaacacagct
ccctatgattatttccggtgtttagtggaacagtttgaggttcagttgcagcagtacaga
cagcagatagaggaactggagaatcaccttactacacagggcagtggatcacacatcaca
ccacaggatctgtcactggccatgcagaagttgtaccagacgtttgtggctctggctgct
cagctccagtcagtacacgagaacgtcaagaccctgaagcagcagtacctgggataccgc
cgggccttcctggaggactccacggacgtcttcgagtccaagcgggtggccagtaagaag
tggcagagtgccccacgcatcaccactggccccgcccccttcagcagcatccccaatgcc
gcggcggtcgccatggcagccacgctgagccagcagcagcagcccggcccagggagccag
gtgtccctggggactggcttgggaaacccctttgccttgggagtgggctctagcttgggc
acctcaggtctcggagtgtttggtgggggtccaggtttcgggggggtagcgacggggggc
tcctcatttggtttctcctctgccagcaagccctcgggagggagcctgagtgcaggtttt
ggaagcaacagtagttcagggtttaacttcagtagccccggcctcaacgcgtctgcaggc
ctgacgtttggcgtgtccaaccctcccgccacgggcttcggcactggaggtccactgctg
cagctcaagaagcccccggtgggaaacaagaggggcaagagatag
DBGET
integrated database retrieval system
