Oncorhynchus kisutch (coho salmon): 109909956
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Entry
109909956 CDS
T09179
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109909956 (trpc1)
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109909956 (trpc1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
109909956
NCBI-ProteinID:
XP_031652324
Ensembl:
ENSOKIG00005046951
UniProt:
A0A8C7KRH9
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Position
LG18:complement(63624185..63673214)
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AA seq
794 aa
AA seq
DB search
MHISVLPYSFSVAMAALYQVTDVSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKRLLEEKTELNINCVDVLGRDAVTISIENQNLDILKLLLEHGCQATDALLVAIDSEVVG
AVDILLNHHPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDIS
LPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSADL
RELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHMANEDTVDKRGLMEER
MNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMSTVLSVAVLWPLL
SLCYLVVPRSRVGHIIHTPFVKFIIHSASYFTFLLLINLYSLVYNEGKKNTMGPALEMID
YLLILWIIGMVWSDVKRLWYEGLEDFLDESRNQLSFVMNSLYLSTFALKIVAHSKFKNVE
DTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISVGQMLQEFGKFLG
LFLLVLISFTIGLTQLYGKDQKDPAKSPAKDCEGIFCQQQSNDAFHTFMGTCYALFWYIF
SLAHVALFVTRINYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHEDKE
WKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLLTSMSKWICSHTSTGKVKRQNSLKE
WRNLKRKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRDLL
GFRTSKYAMFYPRS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtcctgccctactccttctccgtcgcaatggccgctctatatcaggtc
acggacgtgtcctctccggataaatttctggccctgaaagacgtgagggaggtgaaggag
gagactactctggatgaaaagctcttcctactggcctgtgagaaaggtgactactacatg
gtgaagagactgctggaggagaagacagagctcaatatcaactgtgtagacgtgctgggg
agagacgctgtcaccatctctatagagaaccaaaacctggacatccttaagcttctgctg
gagcacggctgccaggcaacagatgctctgttagtggccattgactcggaggtggtggga
gctgtggacatcctcctcaaccatcaccccaggaggtcctcgaagccctccatcgctaaa
ctaatgcagcgcatccagaaccctgagtactccaccaccatggacgtggctccagtgatc
ctggcggcccataggaacaactatgagatactgaccatgttgctgaagcaggatatctcc
ctgcccaggcctcacgctgtgggctgcgagtgtactctctgtaatgccaagaacaagaag
gacagcctacggcactccaggtttcgtctggacatctacaggtgcctggccagcccatct
ctgattatgctgactgaggaggaccccatcctcagggcctttgagctgagtgcagacctc
agggagctcagcctggtcgaggtggagttcaggaatgactatgaggagctggctaagcag
tgtaagatgtttgctaaggatctcctggcccaggcacgtaactccagagaactggaggtg
atcctcaaccacatggccaatgaggacacagtggacaagagaggcctgatggaggaacgc
atgaacctcagccgactcaaactagctatcaagtacaaccagaaagagtttgtggcccag
tccaactgccagcagttcctcaacaccgtctggttcggcgagacggccagctaccggcgt
aaacacacgtgtctgaagatgtccacagtactgagcgtggcggtgctgtggccgctgctc
tccctgtgctacctggtggtgccgcgctcccgcgtgggccatatcatccacacgcccttc
gtcaagttcatcatacacagtgcctcctacttcaccttcctcctgctcatcaacctgtac
tctctggtgtacaacgagggcaagaagaacaccatgggccctgccctggagatgatcgac
tacctgctcatactctggatcatagggatggtgtggtcggacgtgaagcgtctatggtac
gagggcttggaggacttcctggatgagtcgaggaatcagctgagcttcgtcatgaactct
ctctacctgtccaccttcgccctcaagatagtggctcacagcaagtttaagaacgtggag
gacacagagaggaaaaattgggatgccttccaccccatccttgtggctgaggggctgttt
gccttcgctaacgtcctgagctacctacgactgttcttcatgtacaccaccagctcaata
ctgggcccactgcagatctccgttggccagatgctgcaggagtttggtaagttcctgggt
ctgtttctgctggtgctcatctctttcaccatcggcctgacgcagctctatgggaaggat
cagaaggacccggccaagagtcccgccaaagactgtgagggcatcttctgtcagcagcag
agcaacgacgccttccacacgttcatgggaacgtgctacgcactgttttggtacatcttc
tctctggcccacgtggctctcttcgtgacccggatcaactacacggaggagctgaggtca
tttgtgggagccctcatcgtgggcacgtacaacattgtggtggtcatcgttctcaccaag
ctgctggtcgccatgctccacaagagcttcaggcagatcgctaaccacgaggataaggag
tggaagtttgcccgcgccaagctgtggctgagctactttgacgacaagtgtaccctgccg
ccgcccttcaacatcctaccctcccccaagactgtgtgttaccttctgaccagtatgagt
aaatggatctgctcccacacctccacggggaaggtcaagagacagaacagcctcaaggag
tggaggaacctgaagcggaagcgtgatgagaactaccagaagatcatgtgttgtcttgtc
catcgctacctgacgtccaccaggcagaagatgcagagcaccgaccaggccaccgtagag
aacctcaacgacctgcggcaggacctctccaagttccgcaacgagatgagagacctgctg
ggattcagaacctccaagtacgccatgttctacccccggagctaa
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