Oncorhynchus kisutch (coho salmon): 109909958
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Entry
109909958 CDS
T09179
Name
(RefSeq) rho guanine nucleotide exchange factor 4 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109909958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109909958
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109909958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
109909958
NCBI-ProteinID:
XP_020364653
Ensembl:
ENSOKIG00005046745
LinkDB
All DBs
Position
LG18:complement(63436004..63509556)
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AA seq
655 aa
AA seq
DB search
MRTQQGSEGPVPLPGGSCGSSGSTSSGLSPGSPGSDSDSGTPTRGGGGGGGGGGVGGGGL
GERWGAGGGGMGSLGGTLRGVLSHYWSLESLHSTTAVIVPDGGGEKAGLGDDLGSDEDLY
EEFRSSGHRCGHPGGGGEQLAINELISDGSCVYAEALWDHVTMDDQELGFKAGDVIEVVD
ATNKEWWWGRILDSEGWFPASFVRLRVNQDEPMEEYLAQLEEAGAGEVDRPGVGLILGPG
LPCKDQMRTNVINEIMSTERDYIKHLKDICEGYIKQCRKRIDMFTEEQLRCIFGNIEDIY
RFQKKLLKGLEKRFNKEQPHLSEIGSCFLEHQTDFQIYSEYCNNHPNACVQLSRLMKTNK
YVFFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTNPQHRDYKDVEAALNA
MKNVARLINERKRRLENIDKIAQWQSSIEDWEGEDILSMSSDLIFSGELTKISQPQARSQ
QRMFFLFDHQMVYCKKDLLRRDMLYYKGRMDMDLMEVVDVEDGKEKDFNVSVKNALKLRS
LAGDEVHLLCAKKPEQKQRWLRAFQDERTQVQHDLETGFSITEVQKKQAMLNACKSHPAG
KPKAVTRPYYDFLLRQKHPSLPSTVPQQQVFMLAEPKRKATTFWQNIGRLTPFKK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcggacccagcagggctctgaggggcccgtgcccctgcccgggggcagctgtggcagc
agcggcagcaccagctctggactctcccctggatctcctggttcggactcggacagcggt
acccccaccaggggaggaggaggggggggtggtggaggaggagtaggaggggggggtctg
ggggaaagatggggggcaggaggaggagggatggggagcctaggaggtactctcaggggg
gtcctctcccactattggagcctggagagcctgcactccaccactgcggtgatagtacca
gacggaggtggagagaaggccggtctgggtgatgatctaggcagcgatgaagacctgtat
gaagagttccgcagctccggacatcgctgtggacacccagggggaggtggagaacaactg
gccataaatgagctgatcagtgatggcagctgtgtgtacgccgaggccctgtgggaccat
gtcaccatggacgaccaggagcttggcttcaaggcgggggacgtcatcgaggtagtggat
gccaccaacaaggagtggtggtggggacgcatcctggacagtgagggctggttcccagct
agctttgttcggttgcgtgtgaaccaggatgagcccatggaggagtacctagctcagctg
gaggaggctggggctggggaagtggaccggccaggggtgggtctgatcctgggaccaggc
ctgccgtgtaaggaccagatgaggactaacgttatcaatgagatcatgagcacagagaga
gactacatcaaacacctcaaagacatctgtgagggttacatcaagcagtgccgtaagagg
atagacatgttcacagaggagcagctgcggtgtatattcggcaacatcgaagacatctac
cgcttccagaagaagttactgaaaggtctggagaagaggttcaacaaggagcagccgcac
ctcagcgagatcggatcctgcttcctcgaacaccaaacagacttccagatctactcggag
tactgtaacaaccaccccaacgcctgtgtgcagttgtccagactgatgaagaccaacaag
tacgtgttcttcttcgaggcctgtcgtctgctgcagaagatgattgacatctcgctggat
ggcttcctgctcacgcccgttcagaagatctgcaagtaccctctgcagctggccgagcta
ctgaaatacaccaaccctcagcatagggactataaggacgtggaggctgccttgaacgcc
atgaagaacgtggccaggctgatcaacgagaggaagcggcgcctggagaacatcgacaag
atcgcccaatggcagagctccatagaggactgggagggagaagacatcctcagtatgagt
tcagatctgatcttctctggagagctgacgaagatctcccagcctcaggctaggagccag
cagcgcatgttcttcctcttcgaccaccagatggtctactgcaaaaaggacctcctgcgc
agggacatgctgtactataagggtcgtatggacatggacctgatggaggtggtggatgtg
gaggacgggaaggagaaggacttcaatgtgtcggtgaagaacgctctgaagctgcgctcg
ctggcgggggacgaggtccacctgctgtgtgccaagaagcctgagcagaaacaacgctgg
ctccgagccttccaggatgagaggacgcaggtgcagcacgacctcgaaacaggattctcc
atcactgaggtccagaagaaacaggccatgctgaacgcctgcaaaagccatccagctggg
aagcccaaagcggtgacccggccctactatgacttcctgctgcgtcagaagcacccgtct
ctgcccagcaccgtaccccagcagcaggttttcatgctggctgagcccaaacgcaaggcg
accaccttttggcaaaacatcggcagactgacgcctttcaagaagtga
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