Oncorhynchus kisutch (coho salmon): 109909976
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Entry
109909976 CDS
T09179
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109909976
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109909976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
109909976
NCBI-ProteinID:
XP_020364679
Ensembl:
ENSOKIG00005041981
LinkDB
All DBs
Position
LG18:complement(61823115..61839040)
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AA seq
524 aa
AA seq
DB search
MDGIGDVAVGVKRGSDELLSSSLYNSGSDMSSISDGTSNGSDSKKLRVEDRMEAPPSRVL
HIRKLPNETSETEVIALGLPFGKVTNILTLKGKNQAFLELGTEEAAITMVNYYSTVTPHV
RNVPVFIQYSNHKELKTDAGNQRAQAVLQAVSAVQGGGTPTSGSDLALTAASSPVLRIII
DNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPSTAQQAKIALDGQNIYN
SCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKDSNSLLGK
IPGALSPLNAAAAAAAAAGRVALSGHSGSSGVLLASNLNEEMVTPQSLFTLFGVYGDTQR
VKILYNKKDSALIQMADASQAQLAMSHLNGQKMYGKVIRVALSKHTSVQLPRDGLDDQGL
TKDFTNSPLHRFKKPGSKNFQNIFPPSTTLHLSNIPTDVTEEDLRLLFSNAGGTVNAFKF
FQDHKMALLQMSTVEEAIQGLIDLHNYNMGDNHHLRVSFSKSSI
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggacggtattggagatgttgcagttggcgtaaagagaggatcagatgagctgctgtca
agcagtctctacaacagtggctctgacatgagcagtatcagtgatggtacgtccaacggg
agtgacagtaaaaaactgagagtggaagacaggatggaggctcctccttctcgtgtgttg
cacatcagaaaactgcccaacgaaacttcagaaacggaggtcattgccctggggttacct
ttcgggaaggtcaccaatatcctgactctgaagggaaaaaaccaggctttcttggagctg
gggacagaggaagctgcaattactatggtcaactactactctactgtgacaccgcatgtt
cgtaatgtccccgtattcatccagtactccaaccacaaagaactcaaaacagatgccgga
aaccagcgggcccaggcggtcctgcaggcggtgtcagcggtccaaggaggcggtacccct
acgtcgggttcagatctggctctaacagctgcatccagccctgtgctcagaataatcatc
gacaacatgttctaccctgtcactctggatgtgctgcagcagatcttctcaaagttcggc
acggttatgaagataatcacattcactaagaacaatcagttccaggccctgctgcagttc
aacgacccatctactgcacaacaagccaaaattgccctggatggtcagaacatctacaac
tcgtgctgtacgctccgcatcgattactccaagctggtcaacctgaatgtcaagtacaac
aacgacaagagccgtgactatacccggccagagctccccgccggggatggacagcctgcc
atggaccccaacatggctgctgcctttcaaggcaaggactccaactctctgcttggtaag
atcccaggtgcgctgagcccactgaatgctgcggcggcggcggctgctgctgcagggagg
gtggctctgtctggtcactctggctccagcggcgtgctcctggcctccaacctcaatgaa
gagatggttacgccccaaagtctgtttactctcttcggggtctatggggacacccagagg
gtgaagattctttacaataagaaggacagtgctctgatacagatggccgatgccagtcag
gcccagctagcgatgagtcacctgaacggtcagaagatgtatgggaaggtcatcagggtt
gctctgtccaagcacacctcagtgcagctgcccagggatggactggatgaccagggcctt
accaaggacttcaccaactcccccctgcaccgcttcaagaagcccggctccaagaacttt
cagaacatcttccctccctccaccacccttcacctctccaacatcccaacggacgtaact
gaagaagacctgagactactgttctccaatgccgggggcactgtgaacgcattcaagttt
ttccaggatcacaaaatggcgctgctccagatgtcgacggtggaagaggccatccagggt
ctgatcgacctccacaactacaacatgggtgacaaccaccacctgagagtgtccttctcc
aaatcctccatctaa
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integrated database retrieval system
