Oncorhynchus kisutch (coho salmon): 109910019
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Entry
109910019 CDS
T09179
Symbol
npas4
Name
(RefSeq) neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109910019 (npas4)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109910019 (npas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
Motif
Other DBs
NCBI-GeneID:
109910019
NCBI-ProteinID:
XP_020364740
Ensembl:
ENSOKIG00005016799
UniProt:
A0A8C7G806
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All DBs
Position
LG19:complement(35189020..35195136)
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AA seq
911 aa
AA seq
DB search
MYRSTKGASKARRDQINAEIRNLKDLLPISDADKARLSYLHIMSLASMYTRKSVFFSQES
GSPGSLEESARFLSFHELSELVQELPGFLLLLTGEGKLLYLSDSVSEHLGHSMVDLVAQG
DSVYDIIDPTDHFIMRTNLAPPTSPDTDRVFRCRFNTSKSVRRQSAGNKLVLIRARCLSP
PSSSSTPSSYWTSNPVWMCFCSPLEAIPTRFGPGGDQVPALIPPAAANNFFLASFQSQHS
RDMRLQNAQDSVSVYLGLDVSALRSRSWYSLLHPQDLSHASAQHCSLLREGGEGRSEMVV
RVESADQSWVWLYMVLQLEAGDSPISSNNYILSEAEGWSVRQQLSTEQTQLTLVLSTSTS
RQDSLSLSSPDQVFTPSSSGLSAQSFDFSMTVSSVGSSDETGGATTEPMQVEGDPRSSIS
SIEEDSFFQQQQMPAPVQSPSAASSPTPVTVATVADLDFLTQNILLPPSFQLEPPLPAIP
LPLPPAPTSQEQQTKEFVCTPPYTPQLGGGSFLFGEPLFSFDPTGTTTPPPSTTTATATT
SIATSLSSSTPPAPPTTASSPAPPSSLCLTGPSTDLFFPADPCSGSLYEKLPPTPDSPGD
GDCTVMTLPEVRGPLYVDVPLGSLHYPLEGLLTPEASPGKQPCLSFFSLEREREKERAEI
SLLAQHISSLAEGFYLDPLLSKLSPPSMSPSSSPPSPSLDTAGVDSSHMLGEFYPVKAWR
GLDFPIFHDDESLFEESILEALLQDFSTPPPLSPNPPSPPNPVCWHSPSHFEGVSHFCSV
QSAHCNPTAGCGATLASESGAMAEVEGLVEEPMEIEVASSPLSSCSSIPASPPLRLTASP
TSAPSTPVDHSTPAVPCAQSLLEELAALEPMFGAGASIAPGLGQQPELYQLQCHQPPQCF
HKDGSGSVPPF
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgatcaacgaagggagcgtcaaaggctcggagggaccaaatcaacgcggagatt
cggaacctgaaggacctgcttcctatctccgatgcggacaaggcacgcctctcataccta
catatcatgtcccttgccagcatgtacaccaggaaatcggttttcttctctcaagaatcg
ggatctcctggcagtctcgaggaaagcgcgaggttcctgtctttccacgagctgtcagag
ctggtgcaagagctacctgggtttcttctcctgttgaccggggaaggcaagctgctctac
ctgtcagacagcgtctctgagcacctcggccactccatggtggatttggttgcccagggt
gacagtgtgtatgatatcattgaccctactgaccacttcatcatgaggaccaacctggcc
cctcctacatcacctgacacagatcgtgtattccgttgtcgtttcaacacttccaagtcg
gtgcgcaggcagagtgccgggaacaagctggttctgatccgggcgcgctgcctgtcccct
ccctcctcctcttccacccctagctcctactggacatccaaccctgtttggatgtgcttc
tgttcccctctggaggccatccccacccgctttggccctgggggggaccaagttcctgct
cttatccctcctgctgctgcgaacaacttcttcctagcctcgttccagtctcaacacagc
cgagacatgaggctccagaatgcacaggacagtgtcagtgtttacctaggtctcgatgtg
tcagccctgaggtctcgctcctggtacagcctcctccacccacaggacctgtcacacgcc
tctgctcagcactgcagcctgttgagagaaggaggagaaggtagatctgagatggtggta
cgggtggagtctgcagaccagtcctgggtctggctttacatggtactgcagctggaggca
ggagacagccccatcagcagcaacaactacatacttagtgaagcggaggggtggtcagtg
agacagcagctgagcacagagcagacccagctgaccctggtactgagtactagtacctcc
cgccaggacagcttgagcctgtccagcccagaccaagtcttcacccccagcagcagtggc
ctctcagcccagtcctttgacttcagcatgactgtgtcgagtgtgggctcctccgatgag
acagggggtgccaccactgaacccatgcaagtggagggtgaccctcgctccagtatttcc
tctattgaggaggacagcttcttccagcagcagcagatgcctgcccctgtccaaagccca
tctgctgcctcctcccccaccccggttactgttgccacggtagcagatctggacttcctc
actcagaacattctcttgcccccctccttccagctcgaacctccgctgcctgccattccc
ctgcccctccccccagcgcccacctctcaggagcagcagaccaaagagtttgtgtgcacg
cccccctacacaccccagctgggcggtggcagcttcctgttcggcgagcccctctttagc
ttcgaccccactggcaccacaacaccccctccctccaccaccacagctacagccaccacc
tccattgccacctccctctcctcctccaccccacccgccccacccaccacagcctccagt
cctgctcccccctcctccctgtgcctcactggcccctccaccgacctgttcttccctgct
gatccctgcagtggctctctctatgagaagctaccccccactcctgacagccctggggat
ggggactgcacagtgatgaccttgcctgaggttcggggacccctgtatgttgatgtccct
ttagggtcccttcactaccccctcgagggcctcctcaccccagaggcctcccccggtaaa
cagccctgtctctctttcttctccctggagagagagagggagaaggagagagcagagatc
tccctcttagctcagcacatcagctccttagcagagggattctacctggatcctctctta
tccaagctatcccctccttccatgtccccctcctcctcccctccctccccatccctagac
acagctggtgttgactctagccacatgctgggagagttttacccggttaaagcgtggaga
ggcctggacttccccatattccatgatgatgaatctctgtttgaagagagcatcttagaa
gcccttctccaggacttctccacccctccgcccctctcccccaacccgccctctcccccc
aacccagtgtgctggcactcaccctcccactttgagggggtcagccacttctgtagcgtc
caatcggcgcactgtaaccccacggccgggtgcggggcgacgttggccagcgagtccggg
gcgatggcagaagtggaggggctggtggaggagcctatggagattgaggtggcgtcatca
cctctgtcctcctgttcctccatcccagcatcccctcccctgcgactcaccgcctccccc
acctccgctccctccacgcctgtcgaccactctacacccgccgtgccttgcgctcagtcc
ctcctggaggagctggccgccctggaacccatgtttggggcaggtgcctcgatcgccccc
ggcttgggtcaacaacctgagttgtatcaactccagtgtcaccagccgccacagtgcttc
cacaaagatgggagtggaagtgttcccccgttctaa
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