Oncorhynchus kisutch (coho salmon): 109910058
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Entry
109910058 CDS
T09179
Name
(RefSeq) protocadherin beta-15
KO
K16499
protocadherin delta 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109910058
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
109910058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
109910058
NCBI-ProteinID:
XP_020364802
Ensembl:
ENSOKIG00005024319
LinkDB
All DBs
Position
LG19:complement(32355658..32363403)
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AA seq
1023 aa
AA seq
DB search
MIFLGSFEMEHRLTSTRWTPLTGLVVCLLVCACVVDLVLAQIRYSIPEELDHGAFVGNIA
EDLGLDVAKLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPTCFLHLQVV
IENPLELYRVEVEILDVNDNSPSFPWSEFNLEITESAAPGSRFPLESAQDQDVGTNSLRS
YQLSSNEHFVLNIQTRNDGSKFAELVLGTPLDREQQKTHEMVLTAVDGGSPERSGTALIT
ITVLDANDNVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGANGEVSYAFSGHAPLKV
RELFSVDQYTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDVLDVNDNAPE
VILTSVSTPVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVT
SEFLDREAVSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPSYTVYVTENNA
PGAFICSVTAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLR
NFQIRVQAQDAGFPPLSSNVTVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGHL
VAKITALDADAGQNSRLSYQVLQATDPGLVSVALYTGEIRTIRRFVDKDATRQRVVILVK
DNGQPPLSATVSILLSVVDNVPESLSDFGDLTLSPQPPSNLALYLIVSLSTISLIFLVAI
IVLAAVKCYKDRETISGYNLPPFACCCCGGFQPEPPPEVFKKSNLNLQISTGAKVPTNCM
EVNGNGTLSQAYCYKVCLTPESAKSDFMFLKPCSPISTPRNNEAKGADNLAWSAHHRSSS
VNNHSGATTPNELKQPNTDWTLTKNQNSSLKSCNSINMDGTLMRKAMHADPENYMTPMTG
QYWTWGTHMRDYKMSPPATGPPPRSWTPRCTPPPQQQPQPQQPPLPPHPHPHPHPPPDYQ
HNVYIPGTPSALCTLRPAATHHRSELDVHNSFSTFGKKRRFIHNYEPQTDAAAAVINNDL
YND
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgattttcttgggaagctttgagatggagcacaggctcacgagcacgcggtggacaccg
ttaaccgggctggtggtgtgcctgctggtgtgcgcgtgtgtggtggacctggttctggca
cagattcggtactccatcccggaggagttggatcacggggcttttgtcggtaacatcgct
gaggacctcggtttggacgtggccaaactgtccgcccgtcgcttccggatagtctccggt
gccaagaaacagtacttagaggtgaatctggaaaacggtattttatttgttaacgagaag
atcgatcgcgaggagctgtgtgaacggagcccgacctgcttcttacacttgcaagtggtg
atcgagaatccgttagaactgtacagagtggaggtggagattttggatgtgaacgacaac
tctcccagcttcccgtggagcgagttcaatctggagattacagagtcagcggcgcccggg
tcccggttcccgttggagagcgcgcaggaccaggacgtgggcaccaactcgctccgatcc
taccagctgagctccaacgagcactttgtactaaacatccagacacgtaatgacgggagc
aagtttgccgagctcgtgctggggaccccgctggacagggagcagcagaagacgcacgag
atggtgctcacagccgtggacggggggtcgccagagcgttcgggcacggctctcatcacc
atcacggtgttggatgccaacgataacgtgccggttttcgaccggtctgtttaccgggcg
agcctggtagaaaacgcaccgagagggactttagtgctgaagctaaatgccaccgatttg
gacgagggtgcgaacggagaggtctcatacgcgttcagtgggcacgcaccgctcaaagtg
cgcgagctgttcagcgtggaccagtatacgggtgagatccgagtgaaggggattgtggac
tatgagaaagcgagtgtttatgagctgtacgtacaggctaaagacaggggtccctcggca
gtggccgtgcacagtaaggtactggtggatgtcttagatgtgaatgacaacgcgccggaa
gtcatcctcacctccgtgtccacacctgtccaggaagacgcgccaccgggcacggtgata
gccgttataagtgtcatggaccgggactcgggagagaacgggaatgtggactgccagatc
cccagcaacgtccccttccagctccactcctcctttaagaactactacactctggtgact
agcgagtttctcgacagagaagccgtctccgagtacaacatcaccctcacggcccgggac
ctgggctccccgtctctctccacgaggaaaaccatcctcgtccaagtgtctgatattaac
gacaaccccccgcgcttcgcacagccatcatataccgtttatgtgaccgagaataacgcc
ccgggcgcattcatttgctcagtcactgctttcgaccctgattctaatcagaacgcctat
ctgtcctattcgattctagagggtcagatccaaggcatgcccgtgtccacttacgtctcc
atcaactcggacaacggaaacatttatgcgctgcgatcctttgactacgaacagctaagg
aactttcagatacgggtgcaggcgcaggacgctggtttccctccgctcagcagcaatgtc
acggtaaatgtgttcgttttggaccagaatgataatgctccggttatcgtgtccccattg
cccaagaacgggaccgtggcgacagaggtagtcccgaggtcagtggatgcggggcactta
gtcgccaagatcactgcgctagatgcggacgcaggacagaactcgcgcctctcctaccag
gtgctccaggctacggacccggggctggtcagtgtcgccctctacacgggagaaataagg
accattcgccggttcgtggataaggacgctacgaggcagagagtcgtcatcctggtcaag
gacaacgggcagccgcctctctccgccaccgtctctatcctcctctccgtggttgacaat
gtgccggagtccctgtctgatttcggcgacctcactctgagcccccagcccccctccaac
ctcgccctctacttgatcgtgtcactgagcaccatctcgctaatcttcctggtggctatt
atcgtcctggctgcggtcaagtgttacaaggacagagagaccatcagtgggtataacctc
ccccctttcgcctgctgctgttgcgggggcttccaaccagagccgcccccggaggtgttc
aagaaatctaacctaaacctgcagatctccaccggggcgaaggtgcccaccaactgcatg
gaggtcaatggcaacggtactctgtcccaagcctactgttataaagtatgtctgaccccc
gagtcagctaagagcgactttatgttcctgaagccgtgcagccccattagcaccccgagg
aacaacgaggcaaagggggctgataacttggcttggagcgcgcaccaccggagctcatcg
gtgaataaccattccggagccaccactccaaatgagctcaagcaaccaaacacagactgg
accctcacaaagaaccagaactcctctttgaaaagctgtaactctatcaacatggatggc
actctgatgaggaaggccatgcatgcagacccagagaactacatgacacccatgactggc
cagtactggacctggggcacccacatgagggactacaagatgtctcctcctgccactgga
cctcctcctcgctcttggaccccccggtgcacccctccaccccagcaacagccccaaccc
cagcagcctccactccctccacacccccaccctcacccccacccacctccagactaccag
cataacgtgtacatcccgggcacgccgtcggctctgtgcaccctgaggccagcagccacc
caccaccgcagcgagctggacgtccacaactccttctctacctttggcaagaagagacgc
ttcatccacaactacgagccccagacagacgcagcagcagctgtcatcaacaatgacctg
tataatgattaa
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