Oncorhynchus kisutch (coho salmon): 109910079
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Entry
109910079 CDS
T09179
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109910079
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109910079
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
109910079
NCBI-ProteinID:
XP_020364830
Ensembl:
ENSOKIG00005018098
UniProt:
A0A8C7GIE6
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All DBs
Position
LG19:complement(10230827..10238657)
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AA seq
953 aa
AA seq
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MVQLSPSPARDASPSPECSEKGRQGSPKAGSPKMGSHGGLSPLQLALGTSIPNYQGYESY
IEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAVEKYDEVIHNLQFAQELH
KTLGGLTQELLKAQKKALRKEQMAKQEVEKRRLCVVLQVKFLLQTLLQHEHIRKDLLSAR
NLQVAELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDLLEGNNKAVAGTTYKVLKAK
LAKLMDCGYFDCVPPPPSKSPKEVEVPMTKKTVSETASLSTLMMSNKKDLPSREFLNRHY
LPDTDPNGCRDAPVTPNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVFISKVP
VTTKKENAEPKQRRAKSKRERDATAALRVDTPVEVFNSQSSLPKDPILPKDPILRKQQLE
DLMIKIRGSFSFMQDSLLDGEGSPINGHPRLGRHASGSPSPLVQRESRRSPVDHLPKTLH
STPLPSKLLPVDDEPSLTNGDGGCLESCDLDLTTEDLAHVIAIDPCLLLSESETACPSPP
APPSFYRRESSISITLDEKTSARTPISESGKQSPCNGVVPPCTPTPTQGQPFSTPPSRRT
LNMAPSVPFQTMHSVFKVNAPLLPTGDFKSDIIPYSDSGNDLCYVTTSTQTPPDFAPLED
EHLQSANQSECLVGSGGQIFLSPSQSGGTMGRSDQSYYRGSVRGIARGGKGLAHSYFRSS
GGHRGGSFIPQAHLYGARDTGYQHSYRRGGGNAGQRHNNSGWSDSSQVSSPDREGNYSLV
DSAHGDSLQGVGMDLTPQVTPHAPHTLMHVPMYPLPQHPQPLRVAFTAARTANYTPGTLD
QPITFDQLHSNLGEMFNTNVGRFICPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMVSA
YANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatccccagcccgggatgcttctccttcacctgagtgctccgag
aaggggaggcaggggagcccgaaggcaggtagccccaagatgggctcccatggtgggctg
agtcctctccagctagcactgggaacctccatccccaactaccagggctacgagagttac
atcgaggacggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagatt
aaattggaagactacaggaagcgtttgaaacacggggaatcactcaatcaagaccagata
gatgcagtggagaagtatgacgaagtgatccacaacctgcagtttgcccaggagctgcac
aagaccctggggggcctaacacaggaactgctaaaagcccagaagaaggcgttgaggaag
gagcagatggccaagcaggaggtagagaagaggaggctgtgtgtagtgctgcaggttaag
ttcctcctgcagaccctgctgcagcacgagcacatcaggaaggacctcctctctgcccgc
aacctccaggttgcagagctacaaagcctgcttgagctcgctgaactactgggggtgaag
agggacaacaatgtgagtttggaggagcagatggagagcgcagccctggtctacctggac
ctgctggaggggaataataaagctgtagccggaaccacctacaaggtcctgaaggctaag
ttggcgaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagcaagagt
cccaaggaagtagaggttcccatgaccaaaaagacggtgtctgaaacagccagcctctct
accctaatgatgtcaaacaaaaaagacttgcctagcagagagtttcttaacagacactac
ctgcctgacacagaccccaatgggtgtcgagacgctcccgttactccgaactggaaggct
gagttccaggccatgaaggaacaggagccaccggactcgtgggatatggagtctgactcc
actcagcctgtaatccagaaaccatggagaggggcggctgtgttcatctccaaagtgccg
gttactaccaagaaagaaaatgctgaacccaaacagagaagagcgaagtctaaaagggag
cgggacgccacagctgcacttcgtgtggacacccctgtggaggtgttcaactcccagtct
tccttgcccaaggaccccatcctgcccaaggaccccatccttcgcaagcagcagctggag
gacctgatgatcaagatcagaggctccttcagcttcatgcaggattctcttctggatgga
gaaggatcacccattaacggccatcctagactgggccggcatgcctctggatccccctct
ccactcgtacagagagagtcaaggagaagcccagtggaccatctccccaaaacactgcat
tccactccattgccttctaaactcctccctgttgatgacgaacccagtctgaccaatgga
gacgggggttgtctagagagctgtgacctggacctgactacagaggacctggctcatgtc
atagccattgatccatgtctgctgctgtctgagagtgagactgcctgcccctctcctcca
gctcctccttccttctaccgtagggagtcctccatctccatcaccctggacgagaagacc
tctgctcggactcccatctctgaatctgggaagcaatccccctgtaacggggtggtgcct
ccttgtaccccaacccccacccaggggcagccgttttctacccctcccagcagacgtaca
ctcaacatggccccctctgttcccttccagaccatgcattcggtattcaaggtgaatgcc
cccttacttccgactggagactttaaatctgatattatcccctattcggactccggcaac
gacctgtgctatgtcaccaccagcacccagaccccaccggattttgctcccctggaggat
gaacacctacagtcagcgaaccagtctgaatgtctggtgggtagtggtgggcagatcttc
ctgtcccctagccaatcaggtggcaccatgggccgttctgaccaatcatactacagagga
tctgttagaggtattgcacgtggtggcaaggggctggcacactcctactttcgctcttct
ggtgggcacagaggaggaagcttcatcccccaggctcacctgtacggcgctcgggacact
ggctaccagcacagctacaggcgtggtggaggcaatgcaggacaaaggcacaataatagt
ggttggagtgactcctcccaggtgagcagcccagaccgggagggcaactactccctggtg
gactccgcccacggcgactcgctgcagggtgttggcatggacctcaccccccaggtgaca
cctcatgccccccacaccctgatgcacgtacccatgtacccgctcccccagcatccccag
cccctccgcgtggccttcacagcagcccgcacagccaactacaccccgggcaccctggac
cagcccatcacctttgaccagctccacagcaacctgggggagatgttcaacaccaacgtg
ggtcgtttcatctgcccagccaacggcacctacgtcttcctcttccacatcctcaagctg
gcggtcaacgtgccgctctacgtcaacctgatgcgcaacgacgaggtgatggtgtctgcg
tacgccaacgacggggctccggaccacgagacggccagcaaccactccatcctgcagctg
taccagggagaccaggtgtggctgcggctgcaccgcggatccatctatggcagcagctgg
aagtacagcacattctctggcttcctgctctaccaggactga
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