Oncorhynchus kisutch (coho salmon): 109910178
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Entry
109910178 CDS
T09179
Name
(RefSeq) rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109910178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109910178
Membrane trafficking [BR:
oki04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109910178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
End3
Motif
Other DBs
NCBI-GeneID:
109910178
NCBI-ProteinID:
XP_031654277
Ensembl:
ENSOKIG00005033745
UniProt:
A0A8C7MTU2
LinkDB
All DBs
Position
LG19:complement(48081683..48098793)
Genome browser
AA seq
1551 aa
AA seq
DB search
MMSFIDLNDDQRWVPTHVNVTVLRARGLRTKGKHGGSRYVYTIIQVGKEKYTTGLVEKAA
VPEWNEECCFELLPGILEDGVRSAFPSGSGDLVLTIMHRVLIGLDVFLGQAILPLDKIFQ
DGMCPRDEWLKLNSKAGRKEKERGEIQVTVQFTRNNLTASMFDLTMKDKPRSAFGKLKDR
VTGRKIGDMESSSAIVPGRFAALSGSLGKPFREGDRGEGGEDPVEVAEEKQSKVKDFFKG
KGKLRSSSDTRSCSSLASESSMLSLTSERPCPPPLDLGILVDPSSPPSSPIYSNKVKVDT
HHRDTDLAKKVLNNTQSSPKILTHNRSLSDEASRITTTAVPQPCPAVESLKGQGMTPSQS
PLCINGSHIYGSEPVGPKGSGTLPSKLVLLEKCSPLSCSLQNLTKQSEDNGSAGEGRRWS
FDKVNKEDEYVEKEAEPHVSQVQSAQVGGRPVLAAASMLSSTTTVDSADKRKKLRKSLFS
GGKSDSLPAKLAPSQGCPLTEGRLRGWFGSSDSQNKPRLEVSSKVESDSDTPPPLPPRSP
IPTQCSSSTGRASPDSGHPTNTFTPSLTPNPISPSNPFLPCLQCNPFFEDLITEEAQRSP
PCATCSPCHSTALPCIPSTAHDVAVPKKMAAIRRERPRPVARQTSLPALLPRAVTASPPN
PFTSRSISESLGRECDESFDAFASSRLNSPKSSPTNHPSNTTSWQAQIRSTPPHKGNTIP
PIEEMRMSEEEAEPPPLPPRRPITRPLVNKRSSDSWLHRGQELAVQKEACLLSQTGAASL
QHTREGGHKRCTPSPHLYPSLGKDLLVSSDMSDFHTEHSQHYANISPESPSPFKSEDDFK
KFDYEPLRDEDDSCKCMFTEQDLWPDATENNLDPNVKDSIILLASEDTTDTSPTVREDAI
VKNTSHSEIKALSLPVMLLDSEMTVADLLYMSSPKHSKSSLKTLDISSITPDPTMELFSI
HPDKPTKSRNIHHESPPLTLEDLNKNLSNSDFSFIDSASDASPSPSEMMTVHTLKSLGGI
FPQPPQVTHIASSAHDIRLSAEDMLTFQKPSTIDVNSALKANLPEASLCQNNWQDGGCEL
NTSGRDPASNKNNSIFIPNSLNIESEDITRDTVDIKHTQSPLNRKGNIYKSKIDSSIVDP
SCHIRTSPVSPQIGMQQEVVRNKQEVSQPLVKRTKPVNESSPRGASSHRSLKGMIRELYG
NGGANSPGKVLRESPLHQSLSPGHVLTESIEVPFSYQPTKSKFSSPLSPDRETTFKAAKL
FVSLQKTNTNSSTQSITKENCLTERSPSKQNGTISFEDLHAKVAPNVRSPMSARLRPGVS
LHASSPSSVAPSLVTETNAQAKLLPTPGPSSIHHPPILRPSTGANATLAIAPYTSSSFSS
SSSSTSSTTVQPLVDARHTLLPEETQPASSLPRQESRPHPVKPLTTTASQGEKKEGRSFL
EKLKSSIHSGLAAKQTLAEAENEIEESLTDRSAQYEQLTKMELISLLLQQQMDMENQKAA
SEQQAVPLKKHEAEMKKIKAQVRDLEDYIDRLLVQIMEQTPTLLQVRSRHK
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctttatagacttaaatgatgaccagaggtgggtgcctacacatgtgaatgta
actgtccttcgtgcaaggggtttgcggactaagggcaagcacgggggtagccgttatgtt
tacacaatcattcaggtcgggaaggagaaatacaccactggtttggtcgagaaggcggct
gtgccagagtggaatgaggaatgctgtttcgaacttctacccggaatactggaggatgga
gttcgcagtgcttttccctcagggagcggtgacttggtcctcaccattatgcaccgtgtg
cttatcggacttgacgtgtttcttggtcaagcaatccttcctttggataaaatatttcaa
gatggaatgtgcccgagagatgaatggctcaaactcaactccaaggccggccggaaggag
aaggagcgcggcgagatccaggtgacggtccagttcacccgcaacaacctgacagccagc
atgttcgacctaaccatgaaggacaagccacggtctgccttcggcaaacttaaggaccgt
gtgacggggaggaagatcggcgacatggagtcctcatcagccatcgtgccgggacgcttc
gccgccctgtcaggttccctaggaaaaccattccgagagggggaccgaggggaaggggga
gaggaccccgtggaggtagccgaggagaagcagagcaaggtgaaggatttcttcaagggg
aagggaaagctgaggagttcgtccgacacaaggtcgtgttcgtcgctggcctcagagagc
agcatgttgtccttgaccagtgagaggccctgtccccctcctctggacctaggcatcctg
gtggacccttccagtccccccagctcccccatctacagcaacaaggtcaaagttgacacc
caccacagagacacagacctagctaaaaaagtgctcaacaacacacaatcttccccaaag
attctgactcacaatcgatccctcagcgacgaggcaagtaggatcaccactactgccgtt
ccccagccctgtcctgcagtggaatccctcaaaggtcagggtatgactccctcccaatcc
cctctgtgcatcaacggaagccacatctacggatccgaaccagtgggtcccaagggctca
ggcaccctcccatccaagctggtcctccttgagaagtgctcccccctctcttgttcgctg
cagaacctcacaaagcagagcgaggacaatggttcagccggtgagggacggcgctggtcc
ttcgacaaggtgaataaggaagatgagtacgtggagaaggaggccgaacctcatgtctcc
caggttcaaagcgcacaggtagggggtcgtcctgtgctggcagctgcctcaatgctgtct
tccaccaccacggtggactcagcagacaaaaggaaaaagctcagaaagtcgttattctcc
ggagggaagagtgattctctacctgccaagttggcgccgagccagggttgtcctctcacc
gaggggagactgcgaggctggtttggctccagtgattcccagaacaagccaaggctggaa
gtttcttctaaggtagaaagcgactcagacacccctcctcccctcccccctcgctccccc
attcccacccagtgctcttcttccactggccgtgcctcacccgacagtggccatcccact
aacaccttcaccccctctctgacacccaaccccatctctccctccaaccccttcctcccg
tgtctgcagtgtaaccccttttttgaggacctcataaccgaagaggcccagaggtccccc
ccttgcgccacctgctccccctgtcattccacagctttgccttgcatccccagtaccgcc
cacgatgtcgcagtgccaaagaaaatggccgccatacggcgcgagcggcccaggcctgta
gccaggcagacatccctccctgccttactcccgagagcggtgactgccagccccccgaat
ccgttcacctctcgctccatatcagagagcttgggaagagaatgcgacgagtcctttgac
gcctttgcgtccagcaggctgaattcgccaaagagctctcctaccaatcacccttcgaat
acaacctcgtggcaagctcaaataagaagcactcctccacataagggtaacactattcca
cccattgaggagatgcggatgagtgaagaagaagcagagcctccaccgttgcctccacgg
aggcccataacaagacctttggtaaacaagagatcttctgacagctggttgcacaggggt
caggagctggctgtgcagaaagaggcctgtctcctgtcacaaacgggtgcagcttccctg
cagcacacaagagaaggcgggcacaagagatgcacaccaagtccccacctgtacccaagc
ttaggcaaagaccttctcgtcagcagtgacatgtcggactttcataccgaacactcacag
cattatgctaatatttctccagagtctccatctccattcaagtctgaagatgacttcaag
aagtttgactatgaaccattgcgagatgaagatgatagctgtaaatgtatgtttactgag
caggacttatggccagatgcaacagaaaacaatctagacccgaatgtaaaggattcgata
atattgttagcctcagaggataccacggacaccagtcccactgttagagaagacgccatt
gtaaagaacacttcacattctgaaatcaaagccttatctctaccagtaatgcttcttgat
agtgaaatgactgttgccgacctactgtatatgtcttccccaaaacactctaaatccagt
cttaagacgcttgacatttcgtcaattacaccagacccaacaatggaattattctcaatt
cacccagataagcctaccaagtccagaaacatccatcatgaatcgcctcccctaaccttg
gaagatctaaataaaaatctaagtaactctgattttagttttattgactctgcttctgat
gcttccccatctccatctgaaatgatgacagtgcataccctcaaaagtttaggtggcatt
tttcctcaacctccacaagttactcacatagcatcttctgctcatgatatacggctatct
gcagaggatatgctaacttttcagaagcctagtactatagacgtcaactctgccctaaaa
gcaaatttaccagaagcctcgctttgtcaaaacaattggcaagatggaggttgtgaattg
aacacatcaggcagagatcctgcaagcaataagaacaatagcatttttattcctaacagt
cttaacattgagtctgaagacatcactagagacactgtagatataaaacacacacaatct
ccactgaatagaaaaggcaacatttataaatcaaagatagacagttcaatagtagaccct
tcatgtcacattagaacttctccagtttctccacagattggaatgcaacaggaagttgta
cgcaataaacaggaagtgagtcagcctctggtcaaacgaaccaagcctgtcaatgagtct
tcaccaaggggtgctagttcacacagaagtctcaagggaatgatacgagagctctacggc
aacggtggtgcaaatagccctggcaaagtattgcgtgagagccctcttcaccaatcactg
tctcctgggcatgtactcacagagagcattgaagtacccttctcatatcaacccaccaaa
tcaaaattttcctcacctttgtcaccagatagagagacaacgttcaaggcagctaaatta
tttgtttccttgcaaaaaacaaacacaaatagttccactcagtcaattacaaaagaaaac
tgcttaacggaacgttccccatccaaacaaaacgggaccatcagcttcgaagacctccat
gccaaagtagccccaaacgtcagaagccccatgagtgccaggttaaggcctggtgtctct
ctgcatgcttccagtccctcctctgtggccccctccctggtgactgaaactaatgcccag
gctaagctactccccacccccgggccctcctccatacatcaccccccaatcttgagaccc
agcaccggagccaatgccaccttggctattgccccctacacctcttcctccttctcctcc
tcctcctcttctacctcctccaccactgtccagcccctggtcgatgcacggcacacactt
ttacctgaggagacccagccagctagcagcctgccccgacaagagagcagaccccaccca
gtgaagcccttgaccaccacagccagtcagggggagaagaaagagggccggtcatttcta
gagaagctcaagtcttccatccactcaggcctcgccgccaagcagacactggctgaggct
gagaatgagattgaggaatcattaacggacaggtctgcccagtacgagcagctgaccaaa
atggagctgatctcccttctgctgcagcagcagatggatatggagaaccagaaggcggcc
tcagaacagcaggcggtgccgcttaagaaacacgaggcggagatgaagaagatcaaggcg
caggtgcgcgacctggaggactacattgacaggctgctggtgcagatcatggagcagaca
cccacactccttcaagtgcgctcccgacacaagtga
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integrated database retrieval system
